RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 HELQQ8TDG4 1101 aa6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 NUCKS1Q9H1E3 243 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 NEUROD4Q9HD90 331 aa6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 PHF24Q9UPV7 400 aa6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 H3BRB1 525 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 EML1O00423 815 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 ICMTO60725 284 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 VSIG8P0DPA2 414 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 BRD2P25440 801 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 POTEAQ6S8J7 498 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 BICDL1Q6ZP65 573 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 ALDH16A1Q8IZ83 802 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 VWA5B2Q8N398 1253 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 ABTB2Q8N961 1025 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 NANOS1Q8WY41 292 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 MYO19Q96H55 970 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 NGLY1Q96IV0 654 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 TUT1Q9H6E5 874 aaKnown RBP6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 ZDHHC3Q9NYG2 299 aa6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 GPC6Q9Y625 555 aaPredicted RBP6.83□□□□□ -1.32
CALCOCO2-220ENST00000511816 MSX1P28360 303 aa6.82□□□□□ -1.32
CALCOCO2-220ENST00000511816 RTN1Q16799 776 aa6.82□□□□□ -1.32
CALCOCO2-220ENST00000511816 ANKIB1Q9P2G1 1089 aa6.82□□□□□ -1.32
CALCOCO2-220ENST00000511816 SEPT3Q9UH03 358 aa6.82□□□□□ -1.32
CALCOCO2-220ENST00000511816 NSFL1CQ9UNZ2 370 aaKnown RBP6.82□□□□□ -1.32
CALCOCO2-220ENST00000511816 HCN4Q9Y3Q4 1203 aa6.82□□□□□ -1.32
CALCOCO2-220ENST00000511816 ERCC3P19447 782 aa6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 MFAP1P55081 439 aaKnown RBP6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 INSM1Q01101 510 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 AAMPQ13685 434 aa6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 C11orf91Q3C1V1 193 aa6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 RHPN1Q8TCX5 695 aa6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 PHACTR1Q9C0D0 580 aa6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 FAM13BQ9NYF5 915 aa6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 STIM2Q9P246 746 aa6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 DNMT3AQ9Y6K1 912 aaPredicted RBP6.81□□□□□ -1.32
CALCOCO2-220ENST00000511816 SCNN1AP37088 669 aa6.8□□□□□ -1.32
CALCOCO2-220ENST00000511816 ZNF211Q13398 564 aaPredicted RBP6.8□□□□□ -1.32
CALCOCO2-220ENST00000511816 ZDHHC1Q8WTX9 485 aa6.8□□□□□ -1.32
CALCOCO2-220ENST00000511816 ZNF837Q96EG3 531 aaPredicted RBP6.8□□□□□ -1.32
CALCOCO2-220ENST00000511816 RUBCNLQ9H714 662 aa6.8□□□□□ -1.32
CALCOCO2-220ENST00000511816 PARP3Q9Y6F1 533 aa6.8□□□□□ -1.32
CALCOCO2-220ENST00000511816 USP3Q9Y6I4 520 aa6.8□□□□□ -1.32
CALCOCO2-220ENST00000511816 ERBB4Q15303 1308 aa6.79□□□□□ -1.32
CALCOCO2-220ENST00000511816 GMPRP36959 345 aa6.79□□□□□ -1.32
CALCOCO2-220ENST00000511816 NOM1Q5C9Z4 860 aaKnown RBP6.79□□□□□ -1.32
CALCOCO2-220ENST00000511816 COX20Q5RI15 118 aa6.79□□□□□ -1.32
CALCOCO2-220ENST00000511816 NLRP8Q86W28 1048 aa6.79□□□□□ -1.32
CALCOCO2-220ENST00000511816 GTPBP3Q969Y2 492 aaKnown RBP6.79□□□□□ -1.32
CALCOCO2-220ENST00000511816 CRISPLD1Q9H336 500 aa6.79□□□□□ -1.32
CALCOCO2-220ENST00000511816 ANO2Q9NQ90 1003 aa6.79□□□□□ -1.32
CALCOCO2-220ENST00000511816 FAM181BA6NEQ2 426 aa6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 NDUFB5O43674 189 aa6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 PCSK2P16519 638 aa6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 MARSP56192 900 aaKnown RBP6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 DGKZQ13574 1117 aa6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 DBN1Q16643 649 aa6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 CAPN12Q6ZSI9 719 aa6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 ZNF295-AS1Q8N0V1 137 aa6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 TTC16Q8NEE8 873 aa6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 QTRT2Q9H974 415 aaKnown RBP6.78□□□□□ -1.32
CALCOCO2-220ENST00000511816 WIPF1O43516 503 aa6.77□□□□□ -1.33
CALCOCO2-220ENST00000511816 NPR3P17342 541 aa6.77□□□□□ -1.33
CALCOCO2-220ENST00000511816 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-220ENST00000511816 ZSCAN29Q8IWY8 852 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-220ENST00000511816 COL25A1Q9BXS0 654 aaPredicted RBP6.77□□□□□ -1.33
CALCOCO2-220ENST00000511816 A0A1W2PNR3 127 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 RPLP1P05386 114 aaKnown RBP6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 MX2P20592 715 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 ATP4AP20648 1035 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 TXLNAP40222 546 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 SH3PXD2AQ5TCZ1 1133 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 CNTNAP3BQ96NU0 1288 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 CITED4Q96RK1 184 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 CFHR5Q9BXR6 569 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 CNTNAP3Q9BZ76 1288 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 SAP130Q9H0E3 1048 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 BCL11AQ9H165 835 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 MBIPQ9NS73 344 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 CUEDC1Q9NWM3 386 aaPredicted RBP6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 DCTN4Q9UJW0 460 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 BRPF3Q9ULD4 1205 aa6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 ATXN7L1Q9ULK2 861 aaPredicted RBP6.76□□□□□ -1.33
CALCOCO2-220ENST00000511816 GPR25O00155 361 aa6.75□□□□□ -1.33
CALCOCO2-220ENST00000511816 MPSTP25325 297 aa6.75□□□□□ -1.33
CALCOCO2-220ENST00000511816 MAPK1P28482 360 aa6.75□□□□□ -1.33
CALCOCO2-220ENST00000511816 USP5P45974 858 aa6.75□□□□□ -1.33
CALCOCO2-220ENST00000511816 MTMR3Q13615 1198 aa6.75□□□□□ -1.33
CALCOCO2-220ENST00000511816 LRFN2Q9ULH4 789 aa6.75□□□□□ -1.33
CALCOCO2-220ENST00000511816 PCDHGC4Q9Y5F7 938 aa6.75□□□□□ -1.33
CALCOCO2-220ENST00000511816 TGFBR3LH3BV60 316 aa6.74□□□□□ -1.33
CALCOCO2-220ENST00000511816 ATXN7O15265 892 aaPredicted RBP6.74□□□□□ -1.33
CALCOCO2-220ENST00000511816 EPB42P16452 691 aa6.74□□□□□ -1.33
CALCOCO2-220ENST00000511816 EIF1AXP47813 144 aaKnown RBP6.74□□□□□ -1.33
CALCOCO2-220ENST00000511816 PDE3BQ13370 1112 aa6.74□□□□□ -1.33
CALCOCO2-220ENST00000511816 IER5Q5VY09 327 aa6.74□□□□□ -1.33
CALCOCO2-220ENST00000511816 ZIC5Q96T25 663 aa6.74□□□□□ -1.33
CALCOCO2-220ENST00000511816 KHNYNO15037 678 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms