RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 COL15A1P39059 1388 aa20.23■□□□□ 0.83
CXCL3-204ENST00000511669 LRP10Q7Z4F1 713 aa20.23■□□□□ 0.83
CXCL3-204ENST00000511669 OTUD7AQ8TE49 926 aaPredicted RBP20.23■□□□□ 0.83
CXCL3-204ENST00000511669 SALL3Q9BXA9 1300 aa20.23■□□□□ 0.83
CXCL3-204ENST00000511669 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
CXCL3-204ENST00000511669 HSCBQ8IWL3 235 aa20.22■□□□□ 0.83
CXCL3-204ENST00000511669 CLASRPQ8N2M8 674 aaKnown RBP20.22■□□□□ 0.83
CXCL3-204ENST00000511669 NRAPQ86VF7 1730 aa20.22■□□□□ 0.83
CXCL3-204ENST00000511669 PTCD1O75127 700 aaKnown RBP20.21■□□□□ 0.83
CXCL3-204ENST00000511669 STARD3NLO95772 234 aa20.21■□□□□ 0.83
CXCL3-204ENST00000511669 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
CXCL3-204ENST00000511669 ITGB4P16144 1822 aa20.21■□□□□ 0.83
CXCL3-204ENST00000511669 G3BP1Q13283 466 aaKnown RBP eCLIP20.2■□□□□ 0.82
CXCL3-204ENST00000511669 SUCLG2Q96I99 432 aa20.2■□□□□ 0.82
CXCL3-204ENST00000511669 ERC2O15083 957 aa20.2■□□□□ 0.82
CXCL3-204ENST00000511669 TTC41PQ6P2S7 1318 aa20.19■□□□□ 0.82
CXCL3-204ENST00000511669 ADAMTS2O95450 1211 aa20.19■□□□□ 0.82
CXCL3-204ENST00000511669 BICC1Q9H694 974 aaKnown RBP20.19■□□□□ 0.82
CXCL3-204ENST00000511669 SPATA31A1Q5TZJ5 1347 aa20.18■□□□□ 0.82
CXCL3-204ENST00000511669 TRIM6-TRIM34B2RNG4 842 aa20.18■□□□□ 0.82
CXCL3-204ENST00000511669 SLC4A3P48751 1232 aa20.18■□□□□ 0.82
CXCL3-204ENST00000511669 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
CXCL3-204ENST00000511669 NUP188Q5SRE5 1749 aa20.18■□□□□ 0.82
CXCL3-204ENST00000511669 PIP4K2BP78356 416 aa20.17■□□□□ 0.82
CXCL3-204ENST00000511669 PIGBQ92521 554 aa20.17■□□□□ 0.82
CXCL3-204ENST00000511669 TUBGCP6Q96RT7 1819 aa20.17■□□□□ 0.82
CXCL3-204ENST00000511669 BCL9O00512 1426 aa20.17■□□□□ 0.82
CXCL3-204ENST00000511669 DDB1Q16531 1140 aa20.16■□□□□ 0.82
CXCL3-204ENST00000511669 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
CXCL3-204ENST00000511669 SNX21Q969T3 373 aa20.16■□□□□ 0.82
CXCL3-204ENST00000511669 CWC25Q9NXE8 425 aaPredicted RBP20.16■□□□□ 0.82
CXCL3-204ENST00000511669 A0A087WZG4 1122 aa20.16■□□□□ 0.82
CXCL3-204ENST00000511669 NBPF26B4DH59 902 aa20.16■□□□□ 0.82
CXCL3-204ENST00000511669 IFIT2P09913 472 aaKnown RBP20.16■□□□□ 0.82
CXCL3-204ENST00000511669 NBPF14Q5TI25 921 aa20.16■□□□□ 0.82
CXCL3-204ENST00000511669 NBPF10Q6P3W6 841 aaKnown RBP20.16■□□□□ 0.82
CXCL3-204ENST00000511669 NBPF15Q8N660 670 aa20.16■□□□□ 0.82
CXCL3-204ENST00000511669 AK9Q5TCS8 1911 aa20.15■□□□□ 0.82
CXCL3-204ENST00000511669 USP42Q9H9J4 1324 aaKnown RBP20.15■□□□□ 0.82
CXCL3-204ENST00000511669 GLRX3O76003 335 aaKnown RBP20.15■□□□□ 0.82
CXCL3-204ENST00000511669 A1BGP04217 495 aa20.15■□□□□ 0.82
CXCL3-204ENST00000511669 MCCP23508 829 aa20.15■□□□□ 0.82
CXCL3-204ENST00000511669 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
CXCL3-204ENST00000511669 CCDC191Q8NCU4 936 aa20.15■□□□□ 0.82
CXCL3-204ENST00000511669 RILPL2Q969X0 211 aa20.15■□□□□ 0.82
CXCL3-204ENST00000511669 TBC1D2Q9BYX2 928 aa20.15■□□□□ 0.82
CXCL3-204ENST00000511669 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
CXCL3-204ENST00000511669 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
CXCL3-204ENST00000511669 UBAP1LF5GYI3 381 aa20.14■□□□□ 0.81
CXCL3-204ENST00000511669 EPB41L2O43491 1005 aaKnown RBP20.14■□□□□ 0.81
CXCL3-204ENST00000511669 PIP4K2AP48426 406 aaPredicted RBP20.14■□□□□ 0.81
CXCL3-204ENST00000511669 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.81
CXCL3-204ENST00000511669 RBM42Q9BTD8 480 aaKnown RBP20.14■□□□□ 0.81
CXCL3-204ENST00000511669 ATG3Q9NT62 314 aa20.14■□□□□ 0.81
CXCL3-204ENST00000511669 BARGINQ6ZT62 677 aa20.13■□□□□ 0.81
CXCL3-204ENST00000511669 UBE3BQ7Z3V4 1068 aa20.13■□□□□ 0.81
CXCL3-204ENST00000511669 NUTM1Q86Y26 1132 aa20.13■□□□□ 0.81
CXCL3-204ENST00000511669 ASAP1Q9ULH1 1129 aa20.13■□□□□ 0.81
CXCL3-204ENST00000511669 RABEP1Q15276 862 aa20.13■□□□□ 0.81
CXCL3-204ENST00000511669 IL27Q8NEV9 243 aa20.13■□□□□ 0.81
CXCL3-204ENST00000511669 CCDC9Q9Y3X0 531 aaKnown RBP20.13■□□□□ 0.81
CXCL3-204ENST00000511669 SPATA31A5Q5VU36 1347 aa20.12■□□□□ 0.81
CXCL3-204ENST00000511669 SPATA31A7Q8IWB4 1347 aa20.12■□□□□ 0.81
CXCL3-204ENST00000511669 SLIT2O94813 1529 aa20.12■□□□□ 0.81
CXCL3-204ENST00000511669 DOT1LQ8TEK3 1739 aa20.12■□□□□ 0.81
CXCL3-204ENST00000511669 RABL6Q3YEC7 729 aaPredicted RBP20.12■□□□□ 0.81
CXCL3-204ENST00000511669 KAZALD1Q96I82 304 aa20.12■□□□□ 0.81
CXCL3-204ENST00000511669 USP26Q9BXU7 913 aa20.12■□□□□ 0.81
CXCL3-204ENST00000511669 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
CXCL3-204ENST00000511669 NBR1Q14596 966 aa20.11■□□□□ 0.81
CXCL3-204ENST00000511669 HSP90AB3PQ58FF7 597 aa20.11■□□□□ 0.81
CXCL3-204ENST00000511669 SYTL4Q96C24 671 aaPredicted RBP20.11■□□□□ 0.81
CXCL3-204ENST00000511669 COPRSQ9NQ92 184 aa20.11■□□□□ 0.81
CXCL3-204ENST00000511669 ECHDC1Q9NTX5 307 aa20.11■□□□□ 0.81
CXCL3-204ENST00000511669 JCADQ9P266 1359 aa20.11■□□□□ 0.81
CXCL3-204ENST00000511669 H7C1W4 665 aa20.1■□□□□ 0.81
CXCL3-204ENST00000511669 TTLL7Q6ZT98 887 aa20.1■□□□□ 0.81
CXCL3-204ENST00000511669 DNAJC10Q8IXB1 793 aa20.1■□□□□ 0.81
CXCL3-204ENST00000511669 ESYT1Q9BSJ8 1104 aa20.09■□□□□ 0.81
CXCL3-204ENST00000511669 PA2G4Q9UQ80 394 aaKnown RBP20.09■□□□□ 0.81
CXCL3-204ENST00000511669 CHMLP26374 656 aa20.09■□□□□ 0.81
CXCL3-204ENST00000511669 AACSQ86V21 672 aa20.09■□□□□ 0.81
CXCL3-204ENST00000511669 PI4K2BQ8TCG2 481 aa20.09■□□□□ 0.81
CXCL3-204ENST00000511669 CERKQ8TCT0 537 aa20.09■□□□□ 0.81
CXCL3-204ENST00000511669 RUFY2Q8WXA3 655 aa20.09■□□□□ 0.81
CXCL3-204ENST00000511669 ZBTB3Q9H5J0 574 aa20.09■□□□□ 0.81
CXCL3-204ENST00000511669 TRIM28Q13263 835 aaKnown RBP20.08■□□□□ 0.8
CXCL3-204ENST00000511669 TCIRG1Q13488 830 aa20.08■□□□□ 0.8
CXCL3-204ENST00000511669 TSHZ3Q63HK5 1081 aa20.08■□□□□ 0.8
CXCL3-204ENST00000511669 HIP1O00291 1037 aa20.07■□□□□ 0.8
CXCL3-204ENST00000511669 UNC5CLQ8IV45 518 aa20.07■□□□□ 0.8
CXCL3-204ENST00000511669 ZNF330Q9Y3S2 320 aaPredicted RBP20.07■□□□□ 0.8
CXCL3-204ENST00000511669 KAT6BQ8WYB5 2073 aa20.07■□□□□ 0.8
CXCL3-204ENST00000511669 PRIM1P49642 420 aaKnown RBP20.06■□□□□ 0.8
CXCL3-204ENST00000511669 CASP7P55210 303 aa20.06■□□□□ 0.8
CXCL3-204ENST00000511669 MAP3K15Q6ZN16 1313 aa20.06■□□□□ 0.8
CXCL3-204ENST00000511669 ST18O60284 1047 aa20.05■□□□□ 0.8
CXCL3-204ENST00000511669 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
CXCL3-204ENST00000511669 ISCA1Q9BUE6 129 aa20.05■□□□□ 0.8
CXCL3-204ENST00000511669 TJP1Q07157 1748 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms