RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CAMTA2O94983 1202 aa16.55■□□□□ 0.24
COL6A6-203ENST00000511332 FKBP8Q14318 412 aa16.55■□□□□ 0.24
COL6A6-203ENST00000511332 PROSER3Q2NL68 480 aa16.55■□□□□ 0.24
COL6A6-203ENST00000511332 LRP10Q7Z4F1 713 aa16.55■□□□□ 0.24
COL6A6-203ENST00000511332 MAP3K15Q6ZN16 1313 aa16.54■□□□□ 0.24
COL6A6-203ENST00000511332 ANXA1P04083 346 aa16.54■□□□□ 0.24
COL6A6-203ENST00000511332 MMP10P09238 476 aa16.54■□□□□ 0.24
COL6A6-203ENST00000511332 CLEC4GQ6UXB4 293 aa16.54■□□□□ 0.24
COL6A6-203ENST00000511332 BCL2L12Q9HB09 334 aa16.54■□□□□ 0.24
COL6A6-203ENST00000511332 ATP10DQ9P241 1426 aa16.53■□□□□ 0.24
COL6A6-203ENST00000511332 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
COL6A6-203ENST00000511332 ERVV-1B6SEH8 477 aa16.53■□□□□ 0.24
COL6A6-203ENST00000511332 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
COL6A6-203ENST00000511332 PARP3Q9Y6F1 533 aa16.53■□□□□ 0.24
COL6A6-203ENST00000511332 VAMP4O75379 141 aa16.52■□□□□ 0.24
COL6A6-203ENST00000511332 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
COL6A6-203ENST00000511332 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
COL6A6-203ENST00000511332 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
COL6A6-203ENST00000511332 DLEC1Q9Y238 1755 aa16.51■□□□□ 0.23
COL6A6-203ENST00000511332 KIAA1551Q9HCM1 1747 aa16.51■□□□□ 0.23
COL6A6-203ENST00000511332 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
COL6A6-203ENST00000511332 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
COL6A6-203ENST00000511332 ZNF428Q96B54 188 aa16.51■□□□□ 0.23
COL6A6-203ENST00000511332 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
COL6A6-203ENST00000511332 C10orf71Q711Q0 1435 aa16.51■□□□□ 0.23
COL6A6-203ENST00000511332 ANKRD31Q8N7Z5 1873 aa16.5■□□□□ 0.23
COL6A6-203ENST00000511332 TM4SF1P30408 202 aa16.5■□□□□ 0.23
COL6A6-203ENST00000511332 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
COL6A6-203ENST00000511332 NFIXQ14938 502 aa16.5■□□□□ 0.23
COL6A6-203ENST00000511332 TBC1D9BQ66K14 1250 aa16.5■□□□□ 0.23
COL6A6-203ENST00000511332 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
COL6A6-203ENST00000511332 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
COL6A6-203ENST00000511332 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
COL6A6-203ENST00000511332 DDR1Q08345 913 aa16.49■□□□□ 0.23
COL6A6-203ENST00000511332 GIGYF2Q6Y7W6 1299 aaKnown RBP16.49■□□□□ 0.23
COL6A6-203ENST00000511332 PLBD2Q8NHP8 589 aa16.49■□□□□ 0.23
COL6A6-203ENST00000511332 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
COL6A6-203ENST00000511332 LAMB2P55268 1798 aa16.49■□□□□ 0.23
COL6A6-203ENST00000511332 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
COL6A6-203ENST00000511332 HLFQ16534 295 aa16.48■□□□□ 0.23
COL6A6-203ENST00000511332 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
COL6A6-203ENST00000511332 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
COL6A6-203ENST00000511332 NIP7Q9Y221 180 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL6A6-203ENST00000511332 IBTKQ9P2D0 1353 aaPredicted RBP16.48■□□□□ 0.23
COL6A6-203ENST00000511332 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
COL6A6-203ENST00000511332 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
COL6A6-203ENST00000511332 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
COL6A6-203ENST00000511332 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
COL6A6-203ENST00000511332 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
COL6A6-203ENST00000511332 SRCAPQ6ZRS2 3230 aa16.47■□□□□ 0.23
COL6A6-203ENST00000511332 COL11A2P13942 1736 aaPredicted RBP16.46■□□□□ 0.23
COL6A6-203ENST00000511332 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
COL6A6-203ENST00000511332 CD2APQ9Y5K6 639 aa16.46■□□□□ 0.23
COL6A6-203ENST00000511332 NPHP1O15259 732 aa16.45■□□□□ 0.22
COL6A6-203ENST00000511332 SERPINB2P05120 415 aa16.45■□□□□ 0.22
COL6A6-203ENST00000511332 FLIIQ13045 1269 aa16.45■□□□□ 0.22
COL6A6-203ENST00000511332 PARP10Q53GL7 1025 aa16.45■□□□□ 0.22
COL6A6-203ENST00000511332 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
COL6A6-203ENST00000511332 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
COL6A6-203ENST00000511332 CACNA1SQ13698 1873 aa16.44■□□□□ 0.22
COL6A6-203ENST00000511332 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
COL6A6-203ENST00000511332 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
COL6A6-203ENST00000511332 NYXQ9GZU5 481 aa16.44■□□□□ 0.22
COL6A6-203ENST00000511332 TNRC6CQ9HCJ0 1690 aaKnown RBP16.43■□□□□ 0.22
COL6A6-203ENST00000511332 ADCY9O60503 1353 aa16.43■□□□□ 0.22
COL6A6-203ENST00000511332 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
COL6A6-203ENST00000511332 GPTP24298 496 aa16.43■□□□□ 0.22
COL6A6-203ENST00000511332 ST5P78524 1137 aa16.43■□□□□ 0.22
COL6A6-203ENST00000511332 FKBP5Q13451 457 aaPredicted RBP16.43■□□□□ 0.22
COL6A6-203ENST00000511332 ZNF34Q8IZ26 560 aa16.43■□□□□ 0.22
COL6A6-203ENST00000511332 SYT17Q9BSW7 474 aa16.43■□□□□ 0.22
COL6A6-203ENST00000511332 MYH3P11055 1940 aa16.43■□□□□ 0.22
COL6A6-203ENST00000511332 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
COL6A6-203ENST00000511332 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
COL6A6-203ENST00000511332 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
COL6A6-203ENST00000511332 TCIRG1Q13488 830 aa16.42■□□□□ 0.22
COL6A6-203ENST00000511332 KSR2Q6VAB6 950 aa16.42■□□□□ 0.22
COL6A6-203ENST00000511332 G2E3Q7L622 706 aa16.42■□□□□ 0.22
COL6A6-203ENST00000511332 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
COL6A6-203ENST00000511332 RIC1Q4ADV7 1423 aa16.42■□□□□ 0.22
COL6A6-203ENST00000511332 ARFGEF1Q9Y6D6 1849 aa16.42■□□□□ 0.22
COL6A6-203ENST00000511332 PRR5LQ6MZQ0 368 aa16.41■□□□□ 0.22
COL6A6-203ENST00000511332 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
COL6A6-203ENST00000511332 SMC4Q9NTJ3 1288 aa16.41■□□□□ 0.22
COL6A6-203ENST00000511332 MAP3K2Q9Y2U5 619 aa16.41■□□□□ 0.22
COL6A6-203ENST00000511332 PI4KAP2A4QPH2 592 aa16.4■□□□□ 0.22
COL6A6-203ENST00000511332 NEXNQ0ZGT2 675 aa16.4■□□□□ 0.22
COL6A6-203ENST00000511332 PI4KAP1Q8N8J0 262 aa16.4■□□□□ 0.22
COL6A6-203ENST00000511332 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
COL6A6-203ENST00000511332 METTL22Q9BUU2 404 aaPredicted RBP16.4■□□□□ 0.22
COL6A6-203ENST00000511332 PTPRCP08575 1304 aa16.4■□□□□ 0.22
COL6A6-203ENST00000511332 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
COL6A6-203ENST00000511332 TGFB2P61812 414 aa16.39■□□□□ 0.21
COL6A6-203ENST00000511332 NLRP10Q86W26 655 aa16.39■□□□□ 0.21
COL6A6-203ENST00000511332 MRPL50Q8N5N7 158 aaKnown RBP16.39■□□□□ 0.21
COL6A6-203ENST00000511332 ISCA1Q9BUE6 129 aa16.39■□□□□ 0.21
COL6A6-203ENST00000511332 BCL2L13Q9BXK5 485 aa16.39■□□□□ 0.21
COL6A6-203ENST00000511332 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
COL6A6-203ENST00000511332 FAM177BA6PVY3 158 aa16.38■□□□□ 0.21
COL6A6-203ENST00000511332 NTSR2O95665 410 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms