RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
SMAD1-210ENST00000511255 CCDC7Q96M83 1385 aa10.52□□□□□ -0.73
SMAD1-210ENST00000511255 LAPTM4AQ15012 233 aa10.51□□□□□ -0.73
SMAD1-210ENST00000511255 CDCA7Q9BWT1 371 aaPredicted RBP10.51□□□□□ -0.73
SMAD1-210ENST00000511255 RTL1A6NKG5 1358 aa10.51□□□□□ -0.73
SMAD1-210ENST00000511255 KCNC4Q03721 635 aa10.5□□□□□ -0.73
SMAD1-210ENST00000511255 FAM196AQ6ZSG2 479 aa10.5□□□□□ -0.73
SMAD1-210ENST00000511255 EMILIN1Q9Y6C2 1016 aa10.5□□□□□ -0.73
SMAD1-210ENST00000511255 SMG6Q86US8 1419 aaKnown RBP10.5□□□□□ -0.73
SMAD1-210ENST00000511255 EXOC5O00471 708 aa10.49□□□□□ -0.73
SMAD1-210ENST00000511255 TRIM37O94972 964 aa10.49□□□□□ -0.73
SMAD1-210ENST00000511255 IL2RBP14784 551 aa10.49□□□□□ -0.73
SMAD1-210ENST00000511255 DEFB132Q7Z7B7 95 aa10.49□□□□□ -0.73
SMAD1-210ENST00000511255 MORC1Q86VD1 984 aa10.49□□□□□ -0.73
SMAD1-210ENST00000511255 FLT4P35916 1363 aa10.49□□□□□ -0.73
SMAD1-210ENST00000511255 BAG6P46379 1132 aa10.48□□□□□ -0.73
SMAD1-210ENST00000511255 SLC4A3P48751 1232 aa10.48□□□□□ -0.73
SMAD1-210ENST00000511255 CNGB1Q14028 1251 aaPredicted RBP10.48□□□□□ -0.73
SMAD1-210ENST00000511255 HSP90AB2PQ58FF8 381 aa10.48□□□□□ -0.73
SMAD1-210ENST00000511255 TJAP1Q5JTD0 557 aa10.48□□□□□ -0.73
SMAD1-210ENST00000511255 TMUB1Q9BVT8 246 aa10.48□□□□□ -0.73
SMAD1-210ENST00000511255 PARP4Q9UKK3 1724 aaKnown RBP10.47□□□□□ -0.73
SMAD1-210ENST00000511255 GFRA3O60609 400 aa10.47□□□□□ -0.73
SMAD1-210ENST00000511255 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
SMAD1-210ENST00000511255 USHBP1Q8N6Y0 703 aa10.47□□□□□ -0.73
SMAD1-210ENST00000511255 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
SMAD1-210ENST00000511255 REPIN1Q9BWE0 567 aaKnown RBP10.47□□□□□ -0.73
SMAD1-210ENST00000511255 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
SMAD1-210ENST00000511255 NSD2O96028 1365 aa10.47□□□□□ -0.73
SMAD1-210ENST00000511255 OVOS2A0A0G2JMS6 1433 aa10.47□□□□□ -0.73
SMAD1-210ENST00000511255 DISP2A7MBM2 1401 aa10.47□□□□□ -0.73
SMAD1-210ENST00000511255 LRRC37A3O60309 1634 aa10.47□□□□□ -0.73
SMAD1-210ENST00000511255 POLKQ9UBT6 870 aa10.46□□□□□ -0.73
SMAD1-210ENST00000511255 INSRP06213 1382 aa10.46□□□□□ -0.74
SMAD1-210ENST00000511255 KIF24Q5T7B8 1368 aa10.46□□□□□ -0.74
SMAD1-210ENST00000511255 WNK3Q9BYP7 1800 aa10.46□□□□□ -0.74
SMAD1-210ENST00000511255 TNS2Q63HR2 1409 aa10.45□□□□□ -0.74
SMAD1-210ENST00000511255 DDX11L8A8MPP1 907 aa10.45□□□□□ -0.74
SMAD1-210ENST00000511255 APBA3O96018 575 aa10.45□□□□□ -0.74
SMAD1-210ENST00000511255 CC2D1BQ5T0F9 858 aaKnown RBP10.45□□□□□ -0.74
SMAD1-210ENST00000511255 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
SMAD1-210ENST00000511255 MARCH10Q8NA82 808 aaPredicted RBP10.45□□□□□ -0.74
SMAD1-210ENST00000511255 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
SMAD1-210ENST00000511255 PEAK1Q9H792 1746 aa10.44□□□□□ -0.74
SMAD1-210ENST00000511255 FAM208AQ9UK61 1670 aaKnown RBP10.44□□□□□ -0.74
SMAD1-210ENST00000511255 EP400Q96L91 3159 aa10.44□□□□□ -0.74
SMAD1-210ENST00000511255 CFHP08603 1231 aa10.44□□□□□ -0.74
SMAD1-210ENST00000511255 DDX54Q8TDD1 881 aaKnown RBP10.44□□□□□ -0.74
SMAD1-210ENST00000511255 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
SMAD1-210ENST00000511255 MTRQ99707 1265 aa10.44□□□□□ -0.74
SMAD1-210ENST00000511255 RGPD1P0DJD0 1748 aa10.44□□□□□ -0.74
SMAD1-210ENST00000511255 ANKRD26Q9UPS8 1709 aa10.44□□□□□ -0.74
SMAD1-210ENST00000511255 ACTN4O43707 911 aaKnown RBP10.43□□□□□ -0.74
SMAD1-210ENST00000511255 TATP17735 454 aaPredicted RBP10.43□□□□□ -0.74
SMAD1-210ENST00000511255 ZNF516Q92618 1163 aa10.43□□□□□ -0.74
SMAD1-210ENST00000511255 ACSBG1Q96GR2 724 aa10.43□□□□□ -0.74
SMAD1-210ENST00000511255 SLC24A3Q9HC58 644 aa10.43□□□□□ -0.74
SMAD1-210ENST00000511255 MAP2P11137 1827 aaKnown RBP10.42□□□□□ -0.74
SMAD1-210ENST00000511255 TRIM66O15016 1216 aa10.42□□□□□ -0.74
SMAD1-210ENST00000511255 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
SMAD1-210ENST00000511255 AMHR2Q16671 573 aa10.42□□□□□ -0.74
SMAD1-210ENST00000511255 ZCRB1Q8TBF4 217 aaKnown RBP10.42□□□□□ -0.74
SMAD1-210ENST00000511255 AK7Q96M32 723 aa10.42□□□□□ -0.74
SMAD1-210ENST00000511255 RGPD2P0DJD1 1756 aa10.42□□□□□ -0.74
SMAD1-210ENST00000511255 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
SMAD1-210ENST00000511255 GCGRP47871 477 aa10.41□□□□□ -0.74
SMAD1-210ENST00000511255 EIF4A2Q14240 407 aaKnown RBP10.41□□□□□ -0.74
SMAD1-210ENST00000511255 SULF1Q8IWU6 871 aa10.41□□□□□ -0.74
SMAD1-210ENST00000511255 RDH13Q8NBN7 331 aa10.41□□□□□ -0.74
SMAD1-210ENST00000511255 GPCPD1Q9NPB8 672 aa10.41□□□□□ -0.74
SMAD1-210ENST00000511255 MEGF6O75095 1541 aa10.41□□□□□ -0.74
SMAD1-210ENST00000511255 CD46P15529 392 aa10.4□□□□□ -0.74
SMAD1-210ENST00000511255 CLCN1P35523 988 aa10.4□□□□□ -0.74
SMAD1-210ENST00000511255 COPS2P61201 443 aa10.4□□□□□ -0.74
SMAD1-210ENST00000511255 KMT5BQ4FZB7 885 aa10.4□□□□□ -0.74
SMAD1-210ENST00000511255 PRR14Q9BWN1 585 aa10.4□□□□□ -0.74
SMAD1-210ENST00000511255 TNS1Q9HBL0 1735 aaKnown RBP10.39□□□□□ -0.75
SMAD1-210ENST00000511255 ZEB1P37275 1124 aaPredicted RBP10.39□□□□□ -0.75
SMAD1-210ENST00000511255 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
SMAD1-210ENST00000511255 PTF1AQ7RTS3 328 aa10.39□□□□□ -0.75
SMAD1-210ENST00000511255 SYTL4Q96C24 671 aaPredicted RBP10.39□□□□□ -0.75
SMAD1-210ENST00000511255 CAMKK2Q96RR4 588 aa10.39□□□□□ -0.75
SMAD1-210ENST00000511255 IL21Q9HBE4 155 aa10.39□□□□□ -0.75
SMAD1-210ENST00000511255 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
SMAD1-210ENST00000511255 PCDHB3Q9Y5E6 796 aa10.39□□□□□ -0.75
SMAD1-210ENST00000511255 KAT6BQ8WYB5 2073 aa10.38□□□□□ -0.75
SMAD1-210ENST00000511255 KCNQ2O43526 872 aa10.38□□□□□ -0.75
SMAD1-210ENST00000511255 MTHFSP49914 203 aa10.38□□□□□ -0.75
SMAD1-210ENST00000511255 BCL9O00512 1426 aa10.38□□□□□ -0.75
SMAD1-210ENST00000511255 PCDH11XQ9BZA7 1347 aa10.37□□□□□ -0.75
SMAD1-210ENST00000511255 PCDH11YQ9BZA8 1340 aa10.37□□□□□ -0.75
SMAD1-210ENST00000511255 NKX2-3Q8TAU0 364 aa10.37□□□□□ -0.75
SMAD1-210ENST00000511255 PARD3Q8TEW0 1356 aa10.37□□□□□ -0.75
SMAD1-210ENST00000511255 NPC1L1Q9UHC9 1359 aa10.37□□□□□ -0.75
SMAD1-210ENST00000511255 PUS10Q3MIT2 529 aaKnown RBP10.36□□□□□ -0.75
SMAD1-210ENST00000511255 NBPF14Q5TI25 921 aa10.36□□□□□ -0.75
SMAD1-210ENST00000511255 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
SMAD1-210ENST00000511255 IGSF1Q8N6C5 1336 aa10.35□□□□□ -0.75
SMAD1-210ENST00000511255 SBF2Q86WG5 1849 aa10.35□□□□□ -0.75
SMAD1-210ENST00000511255 NRG2O14511 850 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms