RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 STRN4Q9NRL3 753 aa4.57□□□□□ -1.68
HMGB3P3-201ENST00000510526 LZTS3O60299 673 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P3-201ENST00000510526 LRP8Q14114 963 aa4.56□□□□□ -1.68
HMGB3P3-201ENST00000510526 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
HMGB3P3-201ENST00000510526 MICALL1Q8N3F8 863 aa4.56□□□□□ -1.68
HMGB3P3-201ENST00000510526 LILRB5O75023 590 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 NID1P14543 1247 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 SEMA3FQ13275 785 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 IRF5Q13568 498 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 TEAD4Q15561 434 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 GRIK4Q16099 956 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 TRAPPC3LQ5T215 181 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 L3MBTL2Q969R5 705 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 BCANQ96GW7 911 aa4.55□□□□□ -1.68
HMGB3P3-201ENST00000510526 BTBD11A6QL63 1104 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 FAM229AH3BQW9 127 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 EML1O00423 815 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 ALBP02768 609 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 ELNP15502 786 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 NOS2P35228 1153 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 ADH7P40394 386 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 RAC1P63000 192 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 SPEM2Q0P670 501 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 COL9A3Q14050 684 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 ADGRE1Q14246 886 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 EML3Q32P44 896 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 LRRC69Q6ZNQ3 347 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 SCHIP1Q9P0W5 487 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 ANKIB1Q9P2G1 1089 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 ZNF232Q9UNY5 417 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 NOD1Q9Y239 953 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 STARD13Q9Y3M8 1113 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 PCDHGA11Q9Y5H2 935 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 PARP3Q9Y6F1 533 aa4.54□□□□□ -1.68
HMGB3P3-201ENST00000510526 TXLNAP40222 546 aa4.53□□□□□ -1.68
HMGB3P3-201ENST00000510526 VAC14Q08AM6 782 aa4.53□□□□□ -1.68
HMGB3P3-201ENST00000510526 MBTPS1Q14703 1052 aa4.53□□□□□ -1.68
HMGB3P3-201ENST00000510526 TXNRD3Q86VQ6 643 aa4.53□□□□□ -1.68
HMGB3P3-201ENST00000510526 LENG1Q96BZ8 264 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P3-201ENST00000510526 SLC30A3Q99726 388 aa4.53□□□□□ -1.68
HMGB3P3-201ENST00000510526 EFCC1Q9HA90 598 aa4.53□□□□□ -1.68
HMGB3P3-201ENST00000510526 USP3Q9Y6I4 520 aa4.53□□□□□ -1.68
HMGB3P3-201ENST00000510526 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 SERTM1A2A2V5 107 aa4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 HYAL3O43820 417 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 PSME1Q06323 249 aa4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 SFSWAPQ12872 951 aaKnown RBP4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 C1orf53Q5VUE5 145 aa4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 C20orf204Q6ZNR8 217 aa4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 RHPN1Q8TCX5 695 aa4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 CHMP3Q9Y3E7 222 aa4.52□□□□□ -1.69
HMGB3P3-201ENST00000510526 A0A0A0MRY4 1105 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 SELPP16109 830 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 KCNQ4P56696 695 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 GTF2IP78347 998 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 C8orf86Q6ZUL3 223 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 ZDHHC1Q8WTX9 485 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 CEP63Q96MT8 703 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 BRD7Q9NPI1 651 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 KCNH4Q9UQ05 1017 aa4.51□□□□□ -1.69
HMGB3P3-201ENST00000510526 ABL2P42684 1182 aa4.5□□□□□ -1.69
HMGB3P3-201ENST00000510526 HIF1AQ16665 826 aa4.5□□□□□ -1.69
HMGB3P3-201ENST00000510526 SLC9A9Q8IVB4 645 aa4.5□□□□□ -1.69
HMGB3P3-201ENST00000510526 NFATC2IPQ8NCF5 419 aa4.5□□□□□ -1.69
HMGB3P3-201ENST00000510526 C7orf43Q8WVR3 580 aa4.5□□□□□ -1.69
HMGB3P3-201ENST00000510526 TP53INP1Q96A56 240 aa4.5□□□□□ -1.69
HMGB3P3-201ENST00000510526 ZNF358Q9NW07 568 aa4.5□□□□□ -1.69
HMGB3P3-201ENST00000510526 USP21Q9UK80 565 aa4.5□□□□□ -1.69
HMGB3P3-201ENST00000510526 HIRAP54198 1017 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 EPHA4P54764 986 aa4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 PSMA6P60900 246 aaKnown RBP4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 TRIM50Q86XT4 487 aa4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 UBE2OQ9C0C9 1292 aaKnown RBP4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 GOLGA2P5Q9HBQ8 144 aa4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 GDPD2Q9HCC8 539 aa4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 JPH1Q9HDC5 661 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P3-201ENST00000510526 SFI1A8K8P3 1242 aa4.48□□□□□ -1.69
HMGB3P3-201ENST00000510526 SKIP12755 728 aa4.48□□□□□ -1.69
HMGB3P3-201ENST00000510526 BRPF1P55201 1214 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P3-201ENST00000510526 PCSK7Q16549 785 aa4.48□□□□□ -1.69
HMGB3P3-201ENST00000510526 RAB44Q7Z6P3 723 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P3-201ENST00000510526 SLC51AQ86UW1 340 aa4.48□□□□□ -1.69
HMGB3P3-201ENST00000510526 BHMTQ93088 406 aa4.48□□□□□ -1.69
HMGB3P3-201ENST00000510526 RNF112Q9ULX5 631 aa4.48□□□□□ -1.69
HMGB3P3-201ENST00000510526 RGS9O75916 674 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 ATP1A2P50993 1020 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 TYRO3Q06418 890 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 TBC1D8BQ0IIM8 1120 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 WWC1Q8IX03 1113 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 TNS4Q8IZW8 715 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 FMR1NBQ8N0W7 255 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 DTWD1Q8N5C7 304 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 SLC6A14Q9UN76 642 aa4.47□□□□□ -1.69
HMGB3P3-201ENST00000510526 PIK3CDO00329 1044 aa4.46□□□□□ -1.7
HMGB3P3-201ENST00000510526 AFF1P51825 1210 aaKnown RBP4.46□□□□□ -1.7
HMGB3P3-201ENST00000510526 NCOA4Q13772 614 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms