RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 NBPF5PQ86XG9 351 aaPredicted RBP35.12■■■■□ 3.21
SNF8-208ENST00000510195 RIPK4P57078 832 aa35.11■■■■□ 3.21
SNF8-208ENST00000510195 THUMPD2Q9BTF0 503 aaKnown RBP35.11■■■■□ 3.21
SNF8-208ENST00000510195 BABAM1Q9NWV8 329 aa35.11■■■■□ 3.21
SNF8-208ENST00000510195 LMOD3Q0VAK6 560 aa35.1■■■■□ 3.21
SNF8-208ENST00000510195 STYK1Q6J9G0 422 aa35.1■■■■□ 3.21
SNF8-208ENST00000510195 TPTE2Q6XPS3 522 aa35.1■■■■□ 3.21
SNF8-208ENST00000510195 CCDC24Q8N4L8 307 aa35.1■■■■□ 3.21
SNF8-208ENST00000510195 CNKSR1Q969H4 720 aa35.09■■■■□ 3.21
SNF8-208ENST00000510195 NMRK2Q9NPI5 230 aa35.09■■■■□ 3.21
SNF8-208ENST00000510195 SRGNP10124 158 aa35.08■■■■□ 3.21
SNF8-208ENST00000510195 RASSF7Q02833 373 aa35.08■■■■□ 3.21
SNF8-208ENST00000510195 NIP7Q9Y221 180 aaKnown RBP eCLIP35.08■■■■□ 3.21
SNF8-208ENST00000510195 ERVV-1B6SEH8 477 aa35.07■■■■□ 3.2
SNF8-208ENST00000510195 TMPOP42166 694 aaKnown RBP35.07■■■■□ 3.2
SNF8-208ENST00000510195 MASTLQ96GX5 879 aa35.07■■■■□ 3.2
SNF8-208ENST00000510195 ERBB4Q15303 1308 aa35.06■■■■□ 3.2
SNF8-208ENST00000510195 TSPYL4Q9UJ04 414 aa35.05■■■■□ 3.2
SNF8-208ENST00000510195 COL11A2P13942 1736 aaPredicted RBP35.05■■■■□ 3.2
SNF8-208ENST00000510195 KLRG2A4D1S0 409 aaPredicted RBP35.04■■■■□ 3.2
SNF8-208ENST00000510195 NFKBIEO00221 500 aa35.04■■■■□ 3.2
SNF8-208ENST00000510195 HLFQ16534 295 aa35.03■■■■□ 3.2
SNF8-208ENST00000510195 SOGA3Q5TF21 947 aa35.03■■■■□ 3.2
SNF8-208ENST00000510195 C21orf2O43822 256 aa35.02■■■■□ 3.2
SNF8-208ENST00000510195 RRP7AQ9Y3A4 280 aaKnown RBP35.02■■■■□ 3.2
SNF8-208ENST00000510195 C16orf71Q8IYS4 520 aaPredicted RBP35.01■■■■□ 3.2
SNF8-208ENST00000510195 RBM46Q8TBY0 533 aaKnown RBP35.01■■■■□ 3.2
SNF8-208ENST00000510195 MAP3K15Q6ZN16 1313 aa35.01■■■■□ 3.19
SNF8-208ENST00000510195 PRELPP51888 382 aa35■■■■□ 3.19
SNF8-208ENST00000510195 WDR43Q15061 677 aaKnown RBP eCLIP35■■■■□ 3.19
SNF8-208ENST00000510195 KIF6Q6ZMV9 814 aa35■■■■□ 3.19
SNF8-208ENST00000510195 LTBP3Q9NS15 1303 aa35■■■■□ 3.19
SNF8-208ENST00000510195 NPR1P16066 1061 aa34.99■■■■□ 3.19
SNF8-208ENST00000510195 PRPF40BQ6NWY9 871 aaKnown RBP34.99■■■■□ 3.19
SNF8-208ENST00000510195 GLTPD2A6NH11 291 aa34.98■■■■□ 3.19
SNF8-208ENST00000510195 NGEFQ8N5V2 710 aa34.98■■■■□ 3.19
SNF8-208ENST00000510195 RUNDC1Q96C34 613 aa34.98■■■■□ 3.19
SNF8-208ENST00000510195 NYXQ9GZU5 481 aa34.98■■■■□ 3.19
SNF8-208ENST00000510195 FER1L6Q2WGJ9 1857 aa34.98■■■■□ 3.19
SNF8-208ENST00000510195 TNRC6CQ9HCJ0 1690 aaKnown RBP34.98■■■■□ 3.19
SNF8-208ENST00000510195 MYL6BP14649 208 aa34.97■■■■□ 3.19
SNF8-208ENST00000510195 RRAGCQ9HB90 399 aa34.97■■■■□ 3.19
SNF8-208ENST00000510195 ARFGEF2Q9Y6D5 1785 aa34.97■■■■□ 3.19
SNF8-208ENST00000510195 CCDC88AQ3V6T2 1871 aa34.97■■■■□ 3.19
SNF8-208ENST00000510195 PRKRIP1Q9H875 184 aaPredicted RBP34.96■■■■□ 3.19
SNF8-208ENST00000510195 SLX4Q8IY92 1834 aa34.96■■■■□ 3.19
SNF8-208ENST00000510195 GTF2E1P29083 439 aaPredicted RBP34.95■■■■□ 3.19
SNF8-208ENST00000510195 TTLL7Q6ZT98 887 aa34.95■■■■□ 3.19
SNF8-208ENST00000510195 ZNF219Q9P2Y4 722 aaPredicted RBP34.95■■■■□ 3.19
SNF8-208ENST00000510195 NUP98P52948 1817 aa34.95■■■■□ 3.18
SNF8-208ENST00000510195 APLP1P51693 650 aa34.94■■■■□ 3.18
SNF8-208ENST00000510195 TAOK3Q9H2K8 898 aa34.94■■■■□ 3.18
SNF8-208ENST00000510195 FSTL1Q12841 308 aa34.93■■■■□ 3.18
SNF8-208ENST00000510195 IBTKQ9P2D0 1353 aaPredicted RBP34.92■■■■□ 3.18
SNF8-208ENST00000510195 DPY19L2Q6NUT2 758 aa34.92■■■■□ 3.18
SNF8-208ENST00000510195 CCDC146Q8IYE0 955 aa34.92■■■■□ 3.18
SNF8-208ENST00000510195 C7orf43Q8WVR3 580 aa34.92■■■■□ 3.18
SNF8-208ENST00000510195 DICER1Q9UPY3 1922 aaKnown RBP34.91■■■■□ 3.18
SNF8-208ENST00000510195 FAM177BA6PVY3 158 aa34.91■■■■□ 3.18
SNF8-208ENST00000510195 ALDH1B1P30837 517 aa34.91■■■■□ 3.18
SNF8-208ENST00000510195 ADAMTS8Q9UP79 889 aa34.91■■■■□ 3.18
SNF8-208ENST00000510195 TIAM2Q8IVF5 1701 aa34.9■■■■□ 3.18
SNF8-208ENST00000510195 NEUROD2Q15784 382 aa34.9■■■■□ 3.18
SNF8-208ENST00000510195 GIGYF2Q6Y7W6 1299 aaKnown RBP34.9■■■■□ 3.18
SNF8-208ENST00000510195 CHL1O00533 1208 aa34.89■■■■□ 3.18
SNF8-208ENST00000510195 VEGFAP15692 232 aaPredicted RBP34.89■■■■□ 3.18
SNF8-208ENST00000510195 PDIA6Q15084 440 aa34.89■■■■□ 3.18
SNF8-208ENST00000510195 ERFEQ4G0M1 354 aa34.89■■■■□ 3.18
SNF8-208ENST00000510195 LRP10Q7Z4F1 713 aa34.89■■■■□ 3.18
SNF8-208ENST00000510195 ZBTB3Q9H5J0 574 aa34.89■■■■□ 3.18
SNF8-208ENST00000510195 EIF2S2P20042 333 aaKnown RBP34.88■■■■□ 3.17
SNF8-208ENST00000510195 CCDC93Q567U6 631 aa34.88■■■■□ 3.17
SNF8-208ENST00000510195 ZNF34Q8IZ26 560 aa34.88■■■■□ 3.17
SNF8-208ENST00000510195 TRIM35Q9UPQ4 493 aa34.88■■■■□ 3.17
SNF8-208ENST00000510195 CACNA1SQ13698 1873 aa34.88■■■■□ 3.17
SNF8-208ENST00000510195 CRY2Q49AN0 593 aa34.87■■■■□ 3.17
SNF8-208ENST00000510195 RIC1Q4ADV7 1423 aa34.87■■■■□ 3.17
SNF8-208ENST00000510195 UBN2Q6ZU65 1347 aa34.84■■■■□ 3.17
SNF8-208ENST00000510195 PARP10Q53GL7 1025 aa34.84■■■■□ 3.17
SNF8-208ENST00000510195 RTKN2Q8IZC4 609 aa34.84■■■■□ 3.17
SNF8-208ENST00000510195 PPP1R42Q7Z4L9 355 aa34.83■■■■□ 3.17
SNF8-208ENST00000510195 SMC1BQ8NDV3 1235 aa34.83■■■■□ 3.17
SNF8-208ENST00000510195 GPTP24298 496 aa34.82■■■■□ 3.16
SNF8-208ENST00000510195 NUTM1Q86Y26 1132 aa34.82■■■■□ 3.16
SNF8-208ENST00000510195 SUSD4Q5VX71 490 aa34.81■■■■□ 3.16
SNF8-208ENST00000510195 ABCC12Q96J65 1359 aa34.81■■■■□ 3.16
SNF8-208ENST00000510195 FKBP4Q02790 459 aaKnown RBP eCLIP34.8■■■■□ 3.16
SNF8-208ENST00000510195 WDR90Q96KV7 1748 aa34.8■■■■□ 3.16
SNF8-208ENST00000510195 HOXB7P09629 217 aa34.79■■■■□ 3.16
SNF8-208ENST00000510195 HOXA10P31260 410 aaPredicted RBP34.79■■■■□ 3.16
SNF8-208ENST00000510195 NTSR2O95665 410 aa34.78■■■■□ 3.16
SNF8-208ENST00000510195 PROSER3Q2NL68 480 aa34.78■■■■□ 3.16
SNF8-208ENST00000510195 HSP90AB3PQ58FF7 597 aa34.78■■■■□ 3.16
SNF8-208ENST00000510195 CFAP44Q96MT7 982 aa34.78■■■■□ 3.16
SNF8-208ENST00000510195 DDX21Q9NR30 783 aaKnown RBP eCLIP34.78■■■■□ 3.16
SNF8-208ENST00000510195 CC2D2BQ6DHV5 1058 aa34.77■■■■□ 3.16
SNF8-208ENST00000510195 LAS1LQ9Y4W2 734 aaKnown RBP34.77■■■■□ 3.16
SNF8-208ENST00000510195 RNF123Q5XPI4 1314 aa34.77■■■■□ 3.16
SNF8-208ENST00000510195 POTECB2RU33 542 aa34.76■■■■□ 3.16
SNF8-208ENST00000510195 GRIPAP1Q4V328 841 aa34.76■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms