RNA–Protein interactions for RNA: ENST00000509644.5

MATR3-236, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-236ENST00000509644 PRPF40BQ6NWY9 871 aaKnown RBP17.39■□□□□ 0.37
MATR3-236ENST00000509644 CNBD1Q8NA66 436 aa17.39■□□□□ 0.37
MATR3-236ENST00000509644 SETDB2Q96T68 719 aa17.39■□□□□ 0.37
MATR3-236ENST00000509644 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
MATR3-236ENST00000509644 NBPF26B4DH59 902 aa17.38■□□□□ 0.37
MATR3-236ENST00000509644 ERFEQ4G0M1 354 aa17.38■□□□□ 0.37
MATR3-236ENST00000509644 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
MATR3-236ENST00000509644 DZIP3Q86Y13 1208 aaKnown RBP17.38■□□□□ 0.37
MATR3-236ENST00000509644 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
MATR3-236ENST00000509644 CLEC4GQ6UXB4 293 aa17.37■□□□□ 0.37
MATR3-236ENST00000509644 CNKSR1Q969H4 720 aa17.37■□□□□ 0.37
MATR3-236ENST00000509644 TAOK3Q9H2K8 898 aa17.37■□□□□ 0.37
MATR3-236ENST00000509644 DDNO94850 711 aaPredicted RBP17.36■□□□□ 0.37
MATR3-236ENST00000509644 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
MATR3-236ENST00000509644 DPY19L2Q6NUT2 758 aa17.36■□□□□ 0.37
MATR3-236ENST00000509644 MASTLQ96GX5 879 aa17.36■□□□□ 0.37
MATR3-236ENST00000509644 MCM10Q7L590 875 aa17.35■□□□□ 0.37
MATR3-236ENST00000509644 SNED1Q8TER0 1413 aa17.35■□□□□ 0.37
MATR3-236ENST00000509644 RGL2O15211 777 aa17.34■□□□□ 0.37
MATR3-236ENST00000509644 HSPA1AP0DMV8 641 aaKnown RBP17.34■□□□□ 0.37
MATR3-236ENST00000509644 HSPA1BP0DMV9 641 aaKnown RBP17.34■□□□□ 0.37
MATR3-236ENST00000509644 ST5P78524 1137 aa17.34■□□□□ 0.37
MATR3-236ENST00000509644 CACNA1SQ13698 1873 aa17.34■□□□□ 0.37
MATR3-236ENST00000509644 L3MBTL3Q96JM7 780 aaPredicted RBP17.34■□□□□ 0.37
MATR3-236ENST00000509644 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
MATR3-236ENST00000509644 PPP2R1AP30153 589 aa17.33■□□□□ 0.36
MATR3-236ENST00000509644 DCTN1Q14203 1278 aa17.33■□□□□ 0.36
MATR3-236ENST00000509644 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
MATR3-236ENST00000509644 OLFM4Q6UX06 510 aa17.33■□□□□ 0.36
MATR3-236ENST00000509644 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
MATR3-236ENST00000509644 NPR1P16066 1061 aa17.31■□□□□ 0.36
MATR3-236ENST00000509644 HLFQ16534 295 aa17.31■□□□□ 0.36
MATR3-236ENST00000509644 SOGA3Q5TF21 947 aa17.31■□□□□ 0.36
MATR3-236ENST00000509644 NBPF5PQ86XG9 351 aaPredicted RBP17.31■□□□□ 0.36
MATR3-236ENST00000509644 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
MATR3-236ENST00000509644 HTATSF1O43719 755 aaKnown RBP17.3■□□□□ 0.36
MATR3-236ENST00000509644 TNS4Q8IZW8 715 aa17.3■□□□□ 0.36
MATR3-236ENST00000509644 CFAP53Q96M91 514 aa17.3■□□□□ 0.36
MATR3-236ENST00000509644 TAF1DQ9H5J8 278 aaPredicted RBP17.3■□□□□ 0.36
MATR3-236ENST00000509644 ADAMTSL1Q8N6G6 1762 aa17.3■□□□□ 0.36
MATR3-236ENST00000509644 ZNF541Q9H0D2 1346 aa17.29■□□□□ 0.36
MATR3-236ENST00000509644 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
MATR3-236ENST00000509644 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
MATR3-236ENST00000509644 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.368e-7■■■□□ 16.6
MATR3-236ENST00000509644 CCDC93Q567U6 631 aa17.29■□□□□ 0.36
MATR3-236ENST00000509644 NIP7Q9Y221 180 aaKnown RBP eCLIP17.29■□□□□ 0.361e-323■■□□□ 14.4
MATR3-236ENST00000509644 SCN4AP35499 1836 aa17.28■□□□□ 0.36
MATR3-236ENST00000509644 ITGBL1O95965 494 aaPredicted RBP17.28■□□□□ 0.36
MATR3-236ENST00000509644 ZNF277Q9NRM2 450 aaPredicted RBP17.28■□□□□ 0.36
MATR3-236ENST00000509644 NUDCQ9Y266 331 aa17.28■□□□□ 0.36
MATR3-236ENST00000509644 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
MATR3-236ENST00000509644 COL4A5P29400 1685 aa17.27■□□□□ 0.36
MATR3-236ENST00000509644 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
MATR3-236ENST00000509644 CRY2Q49AN0 593 aa17.27■□□□□ 0.36
MATR3-236ENST00000509644 TPTE2Q6XPS3 522 aa17.27■□□□□ 0.36
MATR3-236ENST00000509644 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
MATR3-236ENST00000509644 LDHDQ86WU2 507 aa17.27■□□□□ 0.36
MATR3-236ENST00000509644 MIS18AQ9NYP9 233 aa17.27■□□□□ 0.36
MATR3-236ENST00000509644 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
MATR3-236ENST00000509644 CNTNAP1P78357 1384 aa17.27■□□□□ 0.35
MATR3-236ENST00000509644 FZD9O00144 591 aa17.26■□□□□ 0.35
MATR3-236ENST00000509644 RTF1Q92541 710 aaKnown RBP17.26■□□□□ 0.35
MATR3-236ENST00000509644 MKRN1Q9UHC7 482 aaKnown RBP17.26■□□□□ 0.35
MATR3-236ENST00000509644 LAMB4A4D0S4 1761 aa17.25■□□□□ 0.35
MATR3-236ENST00000509644 IQCA1LA6NCM1 817 aa17.25■□□□□ 0.35
MATR3-236ENST00000509644 NPHP1O15259 732 aa17.25■□□□□ 0.35
MATR3-236ENST00000509644 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
MATR3-236ENST00000509644 KDM3BQ7LBC6 1761 aa17.25■□□□□ 0.35
MATR3-236ENST00000509644 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
MATR3-236ENST00000509644 RIC1Q4ADV7 1423 aa17.23■□□□□ 0.35
MATR3-236ENST00000509644 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
MATR3-236ENST00000509644 ERVV-1B6SEH8 477 aa17.23■□□□□ 0.35
MATR3-236ENST00000509644 CAPN15O75808 1086 aa17.23■□□□□ 0.35
MATR3-236ENST00000509644 TTLL7Q6ZT98 887 aa17.23■□□□□ 0.35
MATR3-236ENST00000509644 RTKN2Q8IZC4 609 aa17.23■□□□□ 0.35
MATR3-236ENST00000509644 UBN2Q6ZU65 1347 aa17.22■□□□□ 0.35
MATR3-236ENST00000509644 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
MATR3-236ENST00000509644 FOXN1O15353 648 aa17.22■□□□□ 0.35
MATR3-236ENST00000509644 HOXA10P31260 410 aaPredicted RBP17.22■□□□□ 0.35
MATR3-236ENST00000509644 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
MATR3-236ENST00000509644 EIF4A1P60842 406 aaKnown RBP17.22■□□□□ 0.35
MATR3-236ENST00000509644 SYNE4Q8N205 404 aa17.22■□□□□ 0.35
MATR3-236ENST00000509644 PSMD1Q99460 953 aa17.22■□□□□ 0.35
MATR3-236ENST00000509644 LTBP1Q14766 1721 aa17.21■□□□□ 0.35
MATR3-236ENST00000509644 NUP98P52948 1817 aa17.21■□□□□ 0.35
MATR3-236ENST00000509644 IBTKQ9P2D0 1353 aaPredicted RBP17.21■□□□□ 0.35
MATR3-236ENST00000509644 ALDH1B1P30837 517 aa17.21■□□□□ 0.35
MATR3-236ENST00000509644 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
MATR3-236ENST00000509644 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
MATR3-236ENST00000509644 HACL1Q9UJ83 578 aa17.21■□□□□ 0.35
MATR3-236ENST00000509644 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.34
MATR3-236ENST00000509644 EPHX2P34913 555 aa17.2■□□□□ 0.34
MATR3-236ENST00000509644 VEGFBP49765 207 aa17.2■□□□□ 0.34
MATR3-236ENST00000509644 C3orf67Q6ZVT6 689 aa17.2■□□□□ 0.34
MATR3-236ENST00000509644 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
MATR3-236ENST00000509644 TMEM88BA6NKF7 163 aa17.19■□□□□ 0.34
MATR3-236ENST00000509644 ZNF34Q8IZ26 560 aa17.19■□□□□ 0.34
MATR3-236ENST00000509644 GPC2Q8N158 579 aa17.19■□□□□ 0.34
MATR3-236ENST00000509644 THUMPD2Q9BTF0 503 aaKnown RBP17.19■□□□□ 0.34
MATR3-236ENST00000509644 SUSD4Q5VX71 490 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms