RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 POTEIP0CG38 1075 aa17.99■□□□□ 0.47
DDX41-210ENST00000509576 POTEJP0CG39 1038 aa17.99■□□□□ 0.47
DDX41-210ENST00000509576 SRGNP10124 158 aa17.98■□□□□ 0.47
DDX41-210ENST00000509576 COL13A1Q5TAT6 717 aaPredicted RBP17.98■□□□□ 0.47
DDX41-210ENST00000509576 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
DDX41-210ENST00000509576 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
DDX41-210ENST00000509576 TEX13AQ9BXU3 409 aaPredicted RBP17.98■□□□□ 0.47
DDX41-210ENST00000509576 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
DDX41-210ENST00000509576 OLFM4Q6UX06 510 aa17.97■□□□□ 0.47
DDX41-210ENST00000509576 C7orf43Q8WVR3 580 aa17.97■□□□□ 0.47
DDX41-210ENST00000509576 PDE6BP35913 854 aa17.96■□□□□ 0.47
DDX41-210ENST00000509576 PRPF40BQ6NWY9 871 aaKnown RBP17.96■□□□□ 0.47
DDX41-210ENST00000509576 SLC51AQ86UW1 340 aa17.96■□□□□ 0.47
DDX41-210ENST00000509576 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
DDX41-210ENST00000509576 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
DDX41-210ENST00000509576 SNED1Q8TER0 1413 aa17.96■□□□□ 0.47
DDX41-210ENST00000509576 LTBP3Q9NS15 1303 aa17.96■□□□□ 0.46
DDX41-210ENST00000509576 SETDB2Q96T68 719 aa17.95■□□□□ 0.46
DDX41-210ENST00000509576 MIS18AQ9NYP9 233 aa17.95■□□□□ 0.46
DDX41-210ENST00000509576 COL4A5P29400 1685 aa17.95■□□□□ 0.46
DDX41-210ENST00000509576 SCN4AP35499 1836 aa17.94■□□□□ 0.46
DDX41-210ENST00000509576 U2AF1L5P0DN76 240 aaPredicted RBP17.94■□□□□ 0.46
DDX41-210ENST00000509576 U2AF1Q01081 240 aaKnown RBP eCLIP17.94■□□□□ 0.463e-7■■■■□ 19.9
DDX41-210ENST00000509576 HLFQ16534 295 aa17.94■□□□□ 0.46
DDX41-210ENST00000509576 STYK1Q6J9G0 422 aa17.94■□□□□ 0.46
DDX41-210ENST00000509576 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
DDX41-210ENST00000509576 DDNO94850 711 aaPredicted RBP17.93■□□□□ 0.46
DDX41-210ENST00000509576 ERFEQ4G0M1 354 aa17.93■□□□□ 0.46
DDX41-210ENST00000509576 LTBP1Q14766 1721 aa17.92■□□□□ 0.46
DDX41-210ENST00000509576 ABCC12Q96J65 1359 aa17.91■□□□□ 0.46
DDX41-210ENST00000509576 SNRPA1P09661 255 aaKnown RBP17.91■□□□□ 0.46
DDX41-210ENST00000509576 MASTLQ96GX5 879 aa17.91■□□□□ 0.46
DDX41-210ENST00000509576 TAOK3Q9H2K8 898 aa17.91■□□□□ 0.46
DDX41-210ENST00000509576 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
DDX41-210ENST00000509576 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
DDX41-210ENST00000509576 ST5P78524 1137 aa17.89■□□□□ 0.45
DDX41-210ENST00000509576 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
DDX41-210ENST00000509576 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
DDX41-210ENST00000509576 CNKSR1Q969H4 720 aa17.89■□□□□ 0.45
DDX41-210ENST00000509576 PLEKHF1Q96S99 279 aa17.89■□□□□ 0.45
DDX41-210ENST00000509576 THUMPD2Q9BTF0 503 aaKnown RBP17.89■□□□□ 0.45
DDX41-210ENST00000509576 ZNF541Q9H0D2 1346 aa17.89■□□□□ 0.45
DDX41-210ENST00000509576 LAMB2P55268 1798 aa17.89■□□□□ 0.45
DDX41-210ENST00000509576 FAM177BA6PVY3 158 aa17.88■□□□□ 0.45
DDX41-210ENST00000509576 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDX41-210ENST00000509576 HTATSF1O43719 755 aaKnown RBP17.86■□□□□ 0.45
DDX41-210ENST00000509576 HSPA1AP0DMV8 641 aaKnown RBP17.86■□□□□ 0.45
DDX41-210ENST00000509576 HSPA1BP0DMV9 641 aaKnown RBP17.86■□□□□ 0.45
DDX41-210ENST00000509576 TAF7Q15545 349 aaPredicted RBP17.86■□□□□ 0.45
DDX41-210ENST00000509576 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
DDX41-210ENST00000509576 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
DDX41-210ENST00000509576 ZNF277Q9NRM2 450 aaPredicted RBP17.86■□□□□ 0.45
DDX41-210ENST00000509576 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
DDX41-210ENST00000509576 NPR1P16066 1061 aa17.85■□□□□ 0.45
DDX41-210ENST00000509576 TAF1P21675 1872 aa17.85■□□□□ 0.45
DDX41-210ENST00000509576 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
DDX41-210ENST00000509576 DPY19L2Q6NUT2 758 aa17.85■□□□□ 0.45
DDX41-210ENST00000509576 UBN2Q6ZU65 1347 aa17.85■□□□□ 0.45
DDX41-210ENST00000509576 PASKQ96RG2 1323 aa17.85■□□□□ 0.45
DDX41-210ENST00000509576 EIF4A1P60842 406 aaKnown RBP17.84■□□□□ 0.45
DDX41-210ENST00000509576 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
DDX41-210ENST00000509576 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
DDX41-210ENST00000509576 L3MBTL3Q96JM7 780 aaPredicted RBP17.84■□□□□ 0.45
DDX41-210ENST00000509576 RGL2O15211 777 aa17.83■□□□□ 0.44
DDX41-210ENST00000509576 FKBP4Q02790 459 aaKnown RBP eCLIP17.83■□□□□ 0.44
DDX41-210ENST00000509576 CRY2Q49AN0 593 aa17.83■□□□□ 0.44
DDX41-210ENST00000509576 CCDC93Q567U6 631 aa17.83■□□□□ 0.44
DDX41-210ENST00000509576 C3orf67Q6ZVT6 689 aa17.83■□□□□ 0.44
DDX41-210ENST00000509576 LRP10Q7Z4F1 713 aa17.83■□□□□ 0.44
DDX41-210ENST00000509576 TAF1DQ9H5J8 278 aaPredicted RBP17.83■□□□□ 0.44
DDX41-210ENST00000509576 NPHP1O15259 732 aa17.82■□□□□ 0.44
DDX41-210ENST00000509576 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
DDX41-210ENST00000509576 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
DDX41-210ENST00000509576 ITGBL1O95965 494 aaPredicted RBP17.81■□□□□ 0.44
DDX41-210ENST00000509576 TPTE2Q6XPS3 522 aa17.81■□□□□ 0.44
DDX41-210ENST00000509576 NPM2Q86SE8 214 aaKnown RBP17.81■□□□□ 0.44
DDX41-210ENST00000509576 MKRN1Q9UHC7 482 aaKnown RBP17.81■□□□□ 0.44
DDX41-210ENST00000509576 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
DDX41-210ENST00000509576 MAP3K15Q6ZN16 1313 aa17.8■□□□□ 0.44
DDX41-210ENST00000509576 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
DDX41-210ENST00000509576 FZD9O00144 591 aa17.79■□□□□ 0.44
DDX41-210ENST00000509576 GPTP24298 496 aa17.79■□□□□ 0.44
DDX41-210ENST00000509576 NFE2L2Q16236 605 aa17.79■□□□□ 0.44
DDX41-210ENST00000509576 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
DDX41-210ENST00000509576 SYNE4Q8N205 404 aa17.79■□□□□ 0.44
DDX41-210ENST00000509576 CREBZFQ9NS37 354 aa17.79■□□□□ 0.44
DDX41-210ENST00000509576 RRP7AQ9Y3A4 280 aaKnown RBP17.79■□□□□ 0.44
DDX41-210ENST00000509576 COL4A1P02462 1669 aa17.79■□□□□ 0.44
DDX41-210ENST00000509576 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
DDX41-210ENST00000509576 MYL6BP14649 208 aa17.78■□□□□ 0.44
DDX41-210ENST00000509576 IARSP41252 1262 aaKnown RBP17.78■□□□□ 0.44
DDX41-210ENST00000509576 PDIA6Q15084 440 aa17.78■□□□□ 0.44
DDX41-210ENST00000509576 PROSER3Q2NL68 480 aa17.78■□□□□ 0.44
DDX41-210ENST00000509576 ZBTB3Q9H5J0 574 aa17.78■□□□□ 0.44
DDX41-210ENST00000509576 CNTNAP1P78357 1384 aa17.78■□□□□ 0.44
DDX41-210ENST00000509576 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.44
DDX41-210ENST00000509576 CAPN15O75808 1086 aa17.77■□□□□ 0.44
DDX41-210ENST00000509576 NTSR2O95665 410 aa17.77■□□□□ 0.44
DDX41-210ENST00000509576 LDHDQ86WU2 507 aa17.77■□□□□ 0.44
DDX41-210ENST00000509576 ZNF34Q8IZ26 560 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms