RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 ST5P78524 1137 aa30.21■■■□□ 2.43
RETREG1-204ENST00000509048 WDR43Q15061 677 aaKnown RBP eCLIP30.21■■■□□ 2.43
RETREG1-204ENST00000509048 NPHP1O15259 732 aa30.2■■■□□ 2.43
RETREG1-204ENST00000509048 CCDC146Q8IYE0 955 aa30.2■■■□□ 2.43
RETREG1-204ENST00000509048 RUNDC1Q96C34 613 aa30.2■■■□□ 2.43
RETREG1-204ENST00000509048 RNF181Q9P0P0 153 aa30.2■■■□□ 2.43
RETREG1-204ENST00000509048 HLFQ16534 295 aa30.19■■■□□ 2.42
RETREG1-204ENST00000509048 NBPF5PQ86XG9 351 aaPredicted RBP30.19■■■□□ 2.42
RETREG1-204ENST00000509048 ZNF622Q969S3 477 aaKnown RBP eCLIP30.19■■■□□ 2.42
RETREG1-204ENST00000509048 NIP7Q9Y221 180 aaKnown RBP eCLIP30.19■■■□□ 2.42
RETREG1-204ENST00000509048 RASSF7Q02833 373 aa30.18■■■□□ 2.42
RETREG1-204ENST00000509048 ADAMTS8Q9UP79 889 aa30.18■■■□□ 2.42
RETREG1-204ENST00000509048 RRP7AQ9Y3A4 280 aaKnown RBP30.18■■■□□ 2.42
RETREG1-204ENST00000509048 ERBB4Q15303 1308 aa30.17■■■□□ 2.42
RETREG1-204ENST00000509048 ERVV-1B6SEH8 477 aa30.16■■■□□ 2.42
RETREG1-204ENST00000509048 SRGNP10124 158 aa30.16■■■□□ 2.42
RETREG1-204ENST00000509048 STYK1Q6J9G0 422 aa30.15■■■□□ 2.42
RETREG1-204ENST00000509048 TPTE2Q6XPS3 522 aa30.15■■■□□ 2.42
RETREG1-204ENST00000509048 NGEFQ8N5V2 710 aa30.15■■■□□ 2.42
RETREG1-204ENST00000509048 MAP3K15Q6ZN16 1313 aa30.15■■■□□ 2.42
RETREG1-204ENST00000509048 MYL6BP14649 208 aa30.14■■■□□ 2.42
RETREG1-204ENST00000509048 NEUROD2Q15784 382 aa30.14■■■□□ 2.42
RETREG1-204ENST00000509048 TRIM35Q9UPQ4 493 aa30.14■■■□□ 2.42
RETREG1-204ENST00000509048 NFKBIEO00221 500 aa30.13■■■□□ 2.41
RETREG1-204ENST00000509048 LMNB1P20700 586 aa30.13■■■□□ 2.41
RETREG1-204ENST00000509048 PRELPP51888 382 aa30.13■■■□□ 2.41
RETREG1-204ENST00000509048 TTLL7Q6ZT98 887 aa30.13■■■□□ 2.41
RETREG1-204ENST00000509048 ZC3H4Q9UPT8 1303 aaKnown RBP30.13■■■□□ 2.41
RETREG1-204ENST00000509048 KLRG2A4D1S0 409 aaPredicted RBP30.12■■■□□ 2.41
RETREG1-204ENST00000509048 KIF6Q6ZMV9 814 aa30.12■■■□□ 2.41
RETREG1-204ENST00000509048 CNKSR1Q969H4 720 aa30.12■■■□□ 2.41
RETREG1-204ENST00000509048 MASTLQ96GX5 879 aa30.12■■■□□ 2.41
RETREG1-204ENST00000509048 NMRK2Q9NPI5 230 aa30.12■■■□□ 2.41
RETREG1-204ENST00000509048 NUP98P52948 1817 aa30.11■■■□□ 2.41
RETREG1-204ENST00000509048 ZEB1P37275 1124 aaPredicted RBP30.11■■■□□ 2.41
RETREG1-204ENST00000509048 LRP10Q7Z4F1 713 aa30.11■■■□□ 2.41
RETREG1-204ENST00000509048 ARFGEF2Q9Y6D5 1785 aa30.1■■■□□ 2.41
RETREG1-204ENST00000509048 CHL1O00533 1208 aa30.1■■■□□ 2.41
RETREG1-204ENST00000509048 C21orf2O43822 256 aa30.1■■■□□ 2.41
RETREG1-204ENST00000509048 PDIA6Q15084 440 aa30.1■■■□□ 2.41
RETREG1-204ENST00000509048 PRPF40BQ6NWY9 871 aaKnown RBP30.09■■■□□ 2.41
RETREG1-204ENST00000509048 SLX4Q8IY92 1834 aa30.09■■■□□ 2.41
RETREG1-204ENST00000509048 FER1L6Q2WGJ9 1857 aa30.08■■■□□ 2.41
RETREG1-204ENST00000509048 KDM2BQ8NHM5 1336 aa30.08■■■□□ 2.41
RETREG1-204ENST00000509048 FAM177BA6PVY3 158 aa30.07■■■□□ 2.4
RETREG1-204ENST00000509048 ZBTB3Q9H5J0 574 aa30.07■■■□□ 2.4
RETREG1-204ENST00000509048 ZNF219Q9P2Y4 722 aaPredicted RBP30.07■■■□□ 2.4
RETREG1-204ENST00000509048 TOMM70O94826 608 aa30.06■■■□□ 2.4
RETREG1-204ENST00000509048 NPR1P16066 1061 aa30.06■■■□□ 2.4
RETREG1-204ENST00000509048 EIF2S2P20042 333 aaKnown RBP30.06■■■□□ 2.4
RETREG1-204ENST00000509048 NYXQ9GZU5 481 aa30.06■■■□□ 2.4
RETREG1-204ENST00000509048 LTBP3Q9NS15 1303 aa30.05■■■□□ 2.4
RETREG1-204ENST00000509048 GIGYF2Q6Y7W6 1299 aaKnown RBP30.05■■■□□ 2.4
RETREG1-204ENST00000509048 CACNA1SQ13698 1873 aa30.05■■■□□ 2.4
RETREG1-204ENST00000509048 IBTKQ9P2D0 1353 aaPredicted RBP30.04■■■□□ 2.4
RETREG1-204ENST00000509048 CCDC88AQ3V6T2 1871 aa30.04■■■□□ 2.4
RETREG1-204ENST00000509048 UBN2Q6ZU65 1347 aa30.04■■■□□ 2.4
RETREG1-204ENST00000509048 HSPA6P17066 643 aa30.04■■■□□ 2.4
RETREG1-204ENST00000509048 C7orf43Q8WVR3 580 aa30.04■■■□□ 2.4
RETREG1-204ENST00000509048 TIAM2Q8IVF5 1701 aa30.03■■■□□ 2.4
RETREG1-204ENST00000509048 GTF2E1P29083 439 aaPredicted RBP30.03■■■□□ 2.4
RETREG1-204ENST00000509048 PROSER3Q2NL68 480 aa30.03■■■□□ 2.4
RETREG1-204ENST00000509048 SOGA3Q5TF21 947 aa30.03■■■□□ 2.4
RETREG1-204ENST00000509048 ZNF34Q8IZ26 560 aa30.03■■■□□ 2.4
RETREG1-204ENST00000509048 ABCC12Q96J65 1359 aa30.03■■■□□ 2.4
RETREG1-204ENST00000509048 TNRC6CQ9HCJ0 1690 aaKnown RBP30.02■■■□□ 2.4
RETREG1-204ENST00000509048 GPTP24298 496 aa30.01■■■□□ 2.39
RETREG1-204ENST00000509048 KRT24Q2M2I5 525 aa30.01■■■□□ 2.39
RETREG1-204ENST00000509048 LAS1LQ9Y4W2 734 aaKnown RBP30.01■■■□□ 2.39
RETREG1-204ENST00000509048 RIC1Q4ADV7 1423 aa30.01■■■□□ 2.39
RETREG1-204ENST00000509048 ANXA1P04083 346 aa30■■■□□ 2.39
RETREG1-204ENST00000509048 CRY2Q49AN0 593 aa30■■■□□ 2.39
RETREG1-204ENST00000509048 NUTM1Q86Y26 1132 aa30■■■□□ 2.39
RETREG1-204ENST00000509048 TAOK3Q9H2K8 898 aa30■■■□□ 2.39
RETREG1-204ENST00000509048 GLTPD2A6NH11 291 aa29.99■■■□□ 2.39
RETREG1-204ENST00000509048 ERFEQ4G0M1 354 aa29.99■■■□□ 2.39
RETREG1-204ENST00000509048 SUSD4Q5VX71 490 aa29.99■■■□□ 2.39
RETREG1-204ENST00000509048 CFAP44Q96MT7 982 aa29.99■■■□□ 2.39
RETREG1-204ENST00000509048 DICER1Q9UPY3 1922 aaKnown RBP29.98■■■□□ 2.39
RETREG1-204ENST00000509048 RRAGCQ9HB90 399 aa29.98■■■□□ 2.39
RETREG1-204ENST00000509048 APAF1O14727 1248 aa29.97■■■□□ 2.39
RETREG1-204ENST00000509048 NTSR2O95665 410 aa29.97■■■□□ 2.39
RETREG1-204ENST00000509048 HOXB7P09629 217 aa29.97■■■□□ 2.39
RETREG1-204ENST00000509048 RBM46Q8TBY0 533 aaKnown RBP29.97■■■□□ 2.39
RETREG1-204ENST00000509048 NECTIN2Q92692 538 aa29.97■■■□□ 2.39
RETREG1-204ENST00000509048 DDX21Q9NR30 783 aaKnown RBP eCLIP29.97■■■□□ 2.39
RETREG1-204ENST00000509048 PARP10Q53GL7 1025 aa29.96■■■□□ 2.39
RETREG1-204ENST00000509048 CCDC93Q567U6 631 aa29.96■■■□□ 2.39
RETREG1-204ENST00000509048 C16orf71Q8IYS4 520 aaPredicted RBP29.96■■■□□ 2.39
RETREG1-204ENST00000509048 ALDH1B1P30837 517 aa29.95■■■□□ 2.39
RETREG1-204ENST00000509048 COPS6Q7L5N1 327 aa29.95■■■□□ 2.39
RETREG1-204ENST00000509048 ZNF853P0CG23 659 aa29.94■■■□□ 2.38
RETREG1-204ENST00000509048 PPP1R42Q7Z4L9 355 aa29.94■■■□□ 2.38
RETREG1-204ENST00000509048 XAGE3Q8WTP9 111 aa29.94■■■□□ 2.38
RETREG1-204ENST00000509048 MBIPQ9NS73 344 aa29.93■■■□□ 2.38
RETREG1-204ENST00000509048 HDGFL1Q5TGJ6 251 aa29.92■■■□□ 2.38
RETREG1-204ENST00000509048 CHPF2Q9P2E5 772 aa29.92■■■□□ 2.38
RETREG1-204ENST00000509048 HOXA10P31260 410 aaPredicted RBP29.91■■■□□ 2.38
RETREG1-204ENST00000509048 AIMP1Q12904 312 aaKnown RBP29.91■■■□□ 2.38
RETREG1-204ENST00000509048 CCDC184Q52MB2 194 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms