RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 DNAAF2Q9NVR5 837 aaKnown RBP6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 KLF15Q9UIH9 416 aa6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 HCN2Q9UL51 889 aa6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 NOVA2Q9UNW9 492 aaKnown RBP6.69□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L15C9J2P7 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L10C9JJH3 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L13C9JLJ4 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L12C9JPN9 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L11C9JVI0 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L21D6R901 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L18D6R9N7 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L22D6RA61 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L17D6RBQ6 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L19D6RCP7 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L20D6RJB6 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 STAU1O95793 577 aaKnown RBP6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 GTF2E1P29083 439 aaPredicted RBP6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 USP17L24Q0WX57 530 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 PTK7Q13308 1070 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 FCHSD1Q86WN1 690 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 CCDC85AQ96PX6 553 aaPredicted RBP6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 CRISPLD1Q9H336 500 aa6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 CCDC9Q9Y3X0 531 aaKnown RBP6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 RBM19Q9Y4C8 960 aaKnown RBP6.68□□□□□ -1.34
COL4A3BP-205ENST00000508692 ANKMY2Q8IV38 441 aa6.67□□□□□ -1.34
COL4A3BP-205ENST00000508692 OGFOD1Q8N543 542 aa6.67□□□□□ -1.34
COL4A3BP-205ENST00000508692 PLVAPQ9BX97 442 aa6.67□□□□□ -1.34
COL4A3BP-205ENST00000508692 MYCP01106 439 aaPredicted RBP6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 ADH6P28332 368 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 PLA2G4AP47712 749 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 TSGA10IPQ3SY00 556 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 CRTC2Q53ET0 693 aaPredicted RBP6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 OXLD1Q5BKU9 147 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 NKAPLQ5M9Q1 402 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 TMEM164Q5U3C3 297 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 RHBDD1Q8TEB9 315 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 ZCCHC2Q9C0B9 1178 aaKnown RBP6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 ZMIZ1Q9ULJ6 1067 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 PCDHGC4Q9Y5F7 938 aa6.66□□□□□ -1.34
COL4A3BP-205ENST00000508692 DCDC2BA2VCK2 349 aa6.65□□□□□ -1.34
COL4A3BP-205ENST00000508692 SPATA31C1P0DKV0 1188 aa6.65□□□□□ -1.34
COL4A3BP-205ENST00000508692 CD33P20138 364 aa6.65□□□□□ -1.34
COL4A3BP-205ENST00000508692 ATP4AP20648 1035 aa6.65□□□□□ -1.34
COL4A3BP-205ENST00000508692 GTF2IP78347 998 aa6.65□□□□□ -1.34
COL4A3BP-205ENST00000508692 SWI5Q1ZZU3 235 aa6.65□□□□□ -1.34
COL4A3BP-205ENST00000508692 FIGNL1Q6PIW4 674 aa6.65□□□□□ -1.34
COL4A3BP-205ENST00000508692 TPSG1Q9NRR2 321 aa6.65□□□□□ -1.34
COL4A3BP-205ENST00000508692 DPYDQ12882 1025 aa6.64□□□□□ -1.35
COL4A3BP-205ENST00000508692 ARTNQ5T4W7 220 aa6.64□□□□□ -1.35
COL4A3BP-205ENST00000508692 PPARGC1BQ86YN6 1023 aaKnown RBP6.64□□□□□ -1.35
COL4A3BP-205ENST00000508692 SIX5Q8N196 739 aa6.64□□□□□ -1.35
COL4A3BP-205ENST00000508692 STK32AQ8WU08 396 aa6.64□□□□□ -1.35
COL4A3BP-205ENST00000508692 ZFP64Q9NPA5 681 aa6.64□□□□□ -1.35
COL4A3BP-205ENST00000508692 ATXN7O15265 892 aaPredicted RBP6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 DYRK3O43781 588 aa6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 MAPTP10636 758 aaKnown RBP6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 SEC13P55735 322 aa6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 PCBP4P57723 403 aaKnown RBP6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 CLDN10P78369 228 aa6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 TLR1Q15399 786 aa6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 ESCO1Q5FWF5 840 aa6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 GZF1Q9H116 711 aaPredicted RBP6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 ETNK1Q9HBU6 452 aa6.63□□□□□ -1.35
COL4A3BP-205ENST00000508692 ZBTB7BO15156 539 aaPredicted RBP6.62□□□□□ -1.35
COL4A3BP-205ENST00000508692 PSME1Q06323 249 aa6.62□□□□□ -1.35
COL4A3BP-205ENST00000508692 CCDC102BQ68D86 513 aa6.62□□□□□ -1.35
COL4A3BP-205ENST00000508692 ZNF594Q96JF6 807 aaPredicted RBP6.62□□□□□ -1.35
COL4A3BP-205ENST00000508692 GNEQ9Y223 722 aaKnown RBP6.62□□□□□ -1.35
COL4A3BP-205ENST00000508692 PCDHGA11Q9Y5H2 935 aa6.62□□□□□ -1.35
COL4A3BP-205ENST00000508692 CARNS1A5YM72 827 aa6.61□□□□□ -1.35
COL4A3BP-205ENST00000508692 TNP2Q05952 138 aa6.61□□□□□ -1.35
COL4A3BP-205ENST00000508692 FAM182BQ5T319 152 aa6.61□□□□□ -1.35
COL4A3BP-205ENST00000508692 NLRP8Q86W28 1048 aa6.61□□□□□ -1.35
COL4A3BP-205ENST00000508692 CCER1Q8TC90 406 aaPredicted RBP6.61□□□□□ -1.35
COL4A3BP-205ENST00000508692 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
COL4A3BP-205ENST00000508692 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
COL4A3BP-205ENST00000508692 M0R2N6 131 aa6.6□□□□□ -1.35
COL4A3BP-205ENST00000508692 KHNYNO15037 678 aaKnown RBP6.6□□□□□ -1.35
COL4A3BP-205ENST00000508692 SSFA2P28290 1259 aa6.6□□□□□ -1.35
COL4A3BP-205ENST00000508692 ARID4AP29374 1257 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-205ENST00000508692 FAM69CQ0P6D2 419 aa6.6□□□□□ -1.35
COL4A3BP-205ENST00000508692 TMCO4Q5TGY1 634 aa6.6□□□□□ -1.35
COL4A3BP-205ENST00000508692 ZNF468Q5VIY5 522 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-205ENST00000508692 AVENQ9NQS1 362 aaPredicted RBP6.6□□□□□ -1.35
COL4A3BP-205ENST00000508692 A0A1W2PNR3 127 aa6.59□□□□□ -1.35
COL4A3BP-205ENST00000508692 FAM229AH3BQW9 127 aa6.59□□□□□ -1.35
COL4A3BP-205ENST00000508692 DKK1O94907 266 aa6.59□□□□□ -1.35
COL4A3BP-205ENST00000508692 PRSS36Q5K4E3 855 aa6.59□□□□□ -1.35
COL4A3BP-205ENST00000508692 TPCN2Q8NHX9 752 aa6.59□□□□□ -1.35
COL4A3BP-205ENST00000508692 AIDAQ96BJ3 306 aa6.59□□□□□ -1.35
COL4A3BP-205ENST00000508692 MTMR7Q9Y216 660 aa6.59□□□□□ -1.35
COL4A3BP-205ENST00000508692 BACH1O14867 736 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 ATP2B4P23634 1241 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 PRRT3Q5FWE3 981 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 ARSJQ5FYB0 599 aaPredicted RBP6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 NBPF11Q86T75 865 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 C1orf216Q8TAB5 229 aa6.58□□□□□ -1.36
COL4A3BP-205ENST00000508692 STRN4Q9NRL3 753 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms