RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 RRP7AQ9Y3A4 280 aaKnown RBP15.93■□□□□ 0.14
CLDND1-218ENST00000508503 KLRG2A4D1S0 409 aaPredicted RBP15.92■□□□□ 0.14
CLDND1-218ENST00000508503 PDIA6Q15084 440 aa15.92■□□□□ 0.14
CLDND1-218ENST00000508503 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
CLDND1-218ENST00000508503 HLFQ16534 295 aa15.92■□□□□ 0.14
CLDND1-218ENST00000508503 C1QTNF8P60827 252 aa15.91■□□□□ 0.14
CLDND1-218ENST00000508503 CNBD1Q8NA66 436 aa15.91■□□□□ 0.14
CLDND1-218ENST00000508503 TPTE2Q6XPS3 522 aa15.9■□□□□ 0.14
CLDND1-218ENST00000508503 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
CLDND1-218ENST00000508503 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
CLDND1-218ENST00000508503 SBF1O95248 1867 aa15.9■□□□□ 0.14
CLDND1-218ENST00000508503 MAP3K15Q6ZN16 1313 aa15.9■□□□□ 0.14
CLDND1-218ENST00000508503 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
CLDND1-218ENST00000508503 SRGNP10124 158 aa15.89■□□□□ 0.13
CLDND1-218ENST00000508503 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
CLDND1-218ENST00000508503 GPBP1L1Q9HC44 474 aaPredicted RBP15.89■□□□□ 0.13
CLDND1-218ENST00000508503 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLDND1-218ENST00000508503 APAF1O14727 1248 aa15.88■□□□□ 0.13
CLDND1-218ENST00000508503 MYL6BP14649 208 aa15.88■□□□□ 0.13
CLDND1-218ENST00000508503 ST5P78524 1137 aa15.88■□□□□ 0.13
CLDND1-218ENST00000508503 CCDC184Q52MB2 194 aa15.88■□□□□ 0.13
CLDND1-218ENST00000508503 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
CLDND1-218ENST00000508503 STYK1Q6J9G0 422 aa15.88■□□□□ 0.13
CLDND1-218ENST00000508503 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
CLDND1-218ENST00000508503 NUP98P52948 1817 aa15.88■□□□□ 0.13
CLDND1-218ENST00000508503 CEP350Q5VT06 3117 aa15.87■□□□□ 0.13
CLDND1-218ENST00000508503 GIGYF2Q6Y7W6 1299 aaKnown RBP15.87■□□□□ 0.13
CLDND1-218ENST00000508503 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
CLDND1-218ENST00000508503 HOXB7P09629 217 aa15.86■□□□□ 0.13
CLDND1-218ENST00000508503 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
CLDND1-218ENST00000508503 ZNF34Q8IZ26 560 aa15.86■□□□□ 0.13
CLDND1-218ENST00000508503 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLDND1-218ENST00000508503 MASTLQ96GX5 879 aa15.86■□□□□ 0.13
CLDND1-218ENST00000508503 NFKBIEO00221 500 aa15.85■□□□□ 0.13
CLDND1-218ENST00000508503 PRELPP51888 382 aa15.85■□□□□ 0.13
CLDND1-218ENST00000508503 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
CLDND1-218ENST00000508503 PROSER3Q2NL68 480 aa15.85■□□□□ 0.13
CLDND1-218ENST00000508503 KIF6Q6ZMV9 814 aa15.85■□□□□ 0.13
CLDND1-218ENST00000508503 C7orf43Q8WVR3 580 aa15.85■□□□□ 0.13
CLDND1-218ENST00000508503 CNKSR1Q969H4 720 aa15.85■□□□□ 0.13
CLDND1-218ENST00000508503 DDX21Q9NR30 783 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLDND1-218ENST00000508503 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
CLDND1-218ENST00000508503 KIF3CO14782 793 aa15.84■□□□□ 0.13
CLDND1-218ENST00000508503 NYXQ9GZU5 481 aa15.84■□□□□ 0.13
CLDND1-218ENST00000508503 SLX4Q8IY92 1834 aa15.83■□□□□ 0.12
CLDND1-218ENST00000508503 NPHP1O15259 732 aa15.83■□□□□ 0.12
CLDND1-218ENST00000508503 NPR1P16066 1061 aa15.83■□□□□ 0.12
CLDND1-218ENST00000508503 LMNB1P20700 586 aa15.83■□□□□ 0.12
CLDND1-218ENST00000508503 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
CLDND1-218ENST00000508503 ZNF526Q8TF50 670 aaPredicted RBP15.83■□□□□ 0.12
CLDND1-218ENST00000508503 ZBTB3Q9H5J0 574 aa15.83■□□□□ 0.12
CLDND1-218ENST00000508503 RNF181Q9P0P0 153 aa15.83■□□□□ 0.12
CLDND1-218ENST00000508503 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
CLDND1-218ENST00000508503 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.12
CLDND1-218ENST00000508503 IBTKQ9P2D0 1353 aaPredicted RBP15.83■□□□□ 0.12
CLDND1-218ENST00000508503 C21orf2O43822 256 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 ANXA1P04083 346 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 CRY2Q49AN0 593 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 COPS6Q7L5N1 327 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 MBIPQ9NS73 344 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 UBN2Q6ZU65 1347 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 LTBP3Q9NS15 1303 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 FER1L6Q2WGJ9 1857 aa15.82■□□□□ 0.12
CLDND1-218ENST00000508503 GNAI1P63096 354 aa15.81■□□□□ 0.12
CLDND1-218ENST00000508503 RASSF7Q02833 373 aa15.81■□□□□ 0.12
CLDND1-218ENST00000508503 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
CLDND1-218ENST00000508503 CCDC27Q2M243 656 aa15.81■□□□□ 0.12
CLDND1-218ENST00000508503 RIC1Q4ADV7 1423 aa15.81■□□□□ 0.12
CLDND1-218ENST00000508503 PARP10Q53GL7 1025 aa15.81■□□□□ 0.12
CLDND1-218ENST00000508503 SLC10A5Q5PT55 438 aa15.81■□□□□ 0.12
CLDND1-218ENST00000508503 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
CLDND1-218ENST00000508503 ARFGEF2Q9Y6D5 1785 aa15.81■□□□□ 0.12
CLDND1-218ENST00000508503 CCDC88AQ3V6T2 1871 aa15.8■□□□□ 0.12
CLDND1-218ENST00000508503 FAM177BA6PVY3 158 aa15.8■□□□□ 0.12
CLDND1-218ENST00000508503 NTSR2O95665 410 aa15.8■□□□□ 0.12
CLDND1-218ENST00000508503 GPTP24298 496 aa15.8■□□□□ 0.12
CLDND1-218ENST00000508503 DUSP27Q5VZP5 1158 aa15.8■□□□□ 0.12
CLDND1-218ENST00000508503 XAGE3Q8WTP9 111 aa15.8■□□□□ 0.12
CLDND1-218ENST00000508503 ANP32CO43423 234 aa15.79■□□□□ 0.12
CLDND1-218ENST00000508503 GTF2E1P29083 439 aaPredicted RBP15.79■□□□□ 0.12
CLDND1-218ENST00000508503 ALDH1B1P30837 517 aa15.79■□□□□ 0.12
CLDND1-218ENST00000508503 HOXA10P31260 410 aaPredicted RBP15.79■□□□□ 0.12
CLDND1-218ENST00000508503 ERFEQ4G0M1 354 aa15.79■□□□□ 0.12
CLDND1-218ENST00000508503 SOGA3Q5TF21 947 aa15.79■□□□□ 0.12
CLDND1-218ENST00000508503 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
CLDND1-218ENST00000508503 NECTIN2Q92692 538 aa15.79■□□□□ 0.12
CLDND1-218ENST00000508503 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
CLDND1-218ENST00000508503 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
CLDND1-218ENST00000508503 TCIRG1Q13488 830 aa15.78■□□□□ 0.12
CLDND1-218ENST00000508503 HSP90AB3PQ58FF7 597 aa15.78■□□□□ 0.12
CLDND1-218ENST00000508503 HDGFL1Q5TGJ6 251 aa15.78■□□□□ 0.12
CLDND1-218ENST00000508503 PPP1R42Q7Z4L9 355 aa15.78■□□□□ 0.12
CLDND1-218ENST00000508503 NMRK2Q9NPI5 230 aa15.78■□□□□ 0.12
CLDND1-218ENST00000508503 CHPF2Q9P2E5 772 aa15.78■□□□□ 0.12
CLDND1-218ENST00000508503 KDM2BQ8NHM5 1336 aa15.77■□□□□ 0.12
CLDND1-218ENST00000508503 DICER1Q9UPY3 1922 aaKnown RBP15.77■□□□□ 0.12
CLDND1-218ENST00000508503 TOMM70O94826 608 aa15.77■□□□□ 0.12
CLDND1-218ENST00000508503 AIMP1Q12904 312 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 1743.8 ms