RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 ANKRD31Q8N7Z5 1873 aa16.08■□□□□ 0.16
PTPN20-218ENST00000508357 TSPYL6Q8N831 410 aa16.07■□□□□ 0.16
PTPN20-218ENST00000508357 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
PTPN20-218ENST00000508357 BRCA1P38398 1863 aaKnown RBP16.06■□□□□ 0.16
PTPN20-218ENST00000508357 NUP98P52948 1817 aa16.06■□□□□ 0.16
PTPN20-218ENST00000508357 COL11A2P13942 1736 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-218ENST00000508357 HLFQ16534 295 aa16.06■□□□□ 0.16
PTPN20-218ENST00000508357 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
PTPN20-218ENST00000508357 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
PTPN20-218ENST00000508357 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
PTPN20-218ENST00000508357 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
PTPN20-218ENST00000508357 PARP3Q9Y6F1 533 aa16.06■□□□□ 0.16
PTPN20-218ENST00000508357 UTRNP46939 3433 aa16.06■□□□□ 0.16
PTPN20-218ENST00000508357 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
PTPN20-218ENST00000508357 ATP10DQ9P241 1426 aa16.05■□□□□ 0.16
PTPN20-218ENST00000508357 MAP3K15Q6ZN16 1313 aa16.05■□□□□ 0.16
PTPN20-218ENST00000508357 ELL2O00472 640 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-218ENST00000508357 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
PTPN20-218ENST00000508357 DLEC1Q9Y238 1755 aa16.04■□□□□ 0.16
PTPN20-218ENST00000508357 TNRC6CQ9HCJ0 1690 aaKnown RBP16.04■□□□□ 0.16
PTPN20-218ENST00000508357 ARFGEF2Q9Y6D5 1785 aa16.03■□□□□ 0.16
PTPN20-218ENST00000508357 RGL2O15211 777 aa16.03■□□□□ 0.16
PTPN20-218ENST00000508357 SERPINB2P05120 415 aa16.03■□□□□ 0.16
PTPN20-218ENST00000508357 ZBTB3Q9H5J0 574 aa16.03■□□□□ 0.16
PTPN20-218ENST00000508357 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
PTPN20-218ENST00000508357 UBN2Q6ZU65 1347 aa16.02■□□□□ 0.16
PTPN20-218ENST00000508357 XAGE3Q8WTP9 111 aa16.02■□□□□ 0.16
PTPN20-218ENST00000508357 ERVV-1B6SEH8 477 aa16.01■□□□□ 0.15
PTPN20-218ENST00000508357 PRR5LQ6MZQ0 368 aa16.01■□□□□ 0.15
PTPN20-218ENST00000508357 CLEC4GQ6UXB4 293 aa16.01■□□□□ 0.15
PTPN20-218ENST00000508357 NPM2Q86SE8 214 aaKnown RBP16.01■□□□□ 0.15
PTPN20-218ENST00000508357 YBX3P16989 372 aaKnown RBP eCLIP16■□□□□ 0.15
PTPN20-218ENST00000508357 KIF6Q6ZMV9 814 aa16■□□□□ 0.15
PTPN20-218ENST00000508357 COPS6Q7L5N1 327 aa16■□□□□ 0.15
PTPN20-218ENST00000508357 CCDC24Q8N4L8 307 aa16■□□□□ 0.15
PTPN20-218ENST00000508357 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
PTPN20-218ENST00000508357 ZNF652Q9Y2D9 606 aa16■□□□□ 0.15
PTPN20-218ENST00000508357 ABCC12Q96J65 1359 aa16■□□□□ 0.15
PTPN20-218ENST00000508357 KCNA3P22001 575 aa15.99■□□□□ 0.15
PTPN20-218ENST00000508357 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
PTPN20-218ENST00000508357 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
PTPN20-218ENST00000508357 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
PTPN20-218ENST00000508357 DBF4Q9UBU7 674 aaPredicted RBP15.99■□□□□ 0.15
PTPN20-218ENST00000508357 WWC3Q9ULE0 1092 aa15.99■□□□□ 0.15
PTPN20-218ENST00000508357 A0A0G2JLW4 131 aa15.98■□□□□ 0.15
PTPN20-218ENST00000508357 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
PTPN20-218ENST00000508357 DPEP1P16444 411 aa15.98■□□□□ 0.15
PTPN20-218ENST00000508357 CHRNA5P30532 468 aa15.98■□□□□ 0.15
PTPN20-218ENST00000508357 GIGYF2Q6Y7W6 1299 aaKnown RBP15.98■□□□□ 0.15
PTPN20-218ENST00000508357 SETDB2Q96T68 719 aa15.98■□□□□ 0.15
PTPN20-218ENST00000508357 PHAXQ9H814 394 aaKnown RBP15.98■□□□□ 0.15
PTPN20-218ENST00000508357 NIP7Q9Y221 180 aaKnown RBP eCLIP15.98■□□□□ 0.15
PTPN20-218ENST00000508357 IBTKQ9P2D0 1353 aaPredicted RBP15.98■□□□□ 0.15
PTPN20-218ENST00000508357 GPTP24298 496 aa15.97■□□□□ 0.15
PTPN20-218ENST00000508357 TGFB2P61812 414 aa15.97■□□□□ 0.15
PTPN20-218ENST00000508357 ZNF34Q8IZ26 560 aa15.97■□□□□ 0.15
PTPN20-218ENST00000508357 CDCA7LQ96GN5 454 aa15.97■□□□□ 0.15
PTPN20-218ENST00000508357 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
PTPN20-218ENST00000508357 VAMP4O75379 141 aa15.96■□□□□ 0.15
PTPN20-218ENST00000508357 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
PTPN20-218ENST00000508357 CNBD1Q8NA66 436 aa15.96■□□□□ 0.15
PTPN20-218ENST00000508357 HYPKQ9NX55 129 aa15.96■□□□□ 0.15
PTPN20-218ENST00000508357 SLFN5Q08AF3 891 aa15.95■□□□□ 0.14
PTPN20-218ENST00000508357 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
PTPN20-218ENST00000508357 ARFGEF1Q9Y6D6 1849 aa15.95■□□□□ 0.14
PTPN20-218ENST00000508357 FAM177BA6PVY3 158 aa15.94■□□□□ 0.14
PTPN20-218ENST00000508357 NTSR2O95665 410 aa15.94■□□□□ 0.14
PTPN20-218ENST00000508357 SUSD4Q5VX71 490 aa15.94■□□□□ 0.14
PTPN20-218ENST00000508357 G2E3Q7L622 706 aa15.94■□□□□ 0.14
PTPN20-218ENST00000508357 NBPF5PQ86XG9 351 aaPredicted RBP15.94■□□□□ 0.14
PTPN20-218ENST00000508357 PELP1Q8IZL8 1130 aaKnown RBP15.94■□□□□ 0.14
PTPN20-218ENST00000508357 PLBD2Q8NHP8 589 aa15.94■□□□□ 0.14
PTPN20-218ENST00000508357 ADCY9O60503 1353 aa15.94■□□□□ 0.14
PTPN20-218ENST00000508357 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
PTPN20-218ENST00000508357 E9PSI1 815 aa15.93■□□□□ 0.14
PTPN20-218ENST00000508357 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
PTPN20-218ENST00000508357 TRMT2AQ8IZ69 625 aaKnown RBP15.93■□□□□ 0.14
PTPN20-218ENST00000508357 DDX60Q8IY21 1712 aaKnown RBP15.92■□□□□ 0.14
PTPN20-218ENST00000508357 GPR162Q16538 588 aa15.92■□□□□ 0.14
PTPN20-218ENST00000508357 NLRP10Q86W26 655 aa15.92■□□□□ 0.14
PTPN20-218ENST00000508357 BRIP1Q9BX63 1249 aa15.92■□□□□ 0.14
PTPN20-218ENST00000508357 LAMB2P55268 1798 aa15.92■□□□□ 0.14
PTPN20-218ENST00000508357 CACNA1SQ13698 1873 aa15.91■□□□□ 0.14
PTPN20-218ENST00000508357 ST5P78524 1137 aa15.91■□□□□ 0.14
PTPN20-218ENST00000508357 TCIRG1Q13488 830 aa15.91■□□□□ 0.14
PTPN20-218ENST00000508357 ERFEQ4G0M1 354 aa15.91■□□□□ 0.14
PTPN20-218ENST00000508357 ANKRD13DQ6ZTN6 518 aa15.91■□□□□ 0.14
PTPN20-218ENST00000508357 C2CD5Q86YS7 1000 aa15.91■□□□□ 0.14
PTPN20-218ENST00000508357 ZNF428Q96B54 188 aa15.91■□□□□ 0.14
PTPN20-218ENST00000508357 ISCA1Q9BUE6 129 aa15.91■□□□□ 0.14
PTPN20-218ENST00000508357 CACNA1FO60840 1977 aa15.9■□□□□ 0.14
PTPN20-218ENST00000508357 C3orf67Q6ZVT6 689 aa15.9■□□□□ 0.14
PTPN20-218ENST00000508357 KLRG2A4D1S0 409 aaPredicted RBP15.89■□□□□ 0.13
PTPN20-218ENST00000508357 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
PTPN20-218ENST00000508357 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
PTPN20-218ENST00000508357 PARP10Q53GL7 1025 aa15.89■□□□□ 0.13
PTPN20-218ENST00000508357 HSP90AB3PQ58FF7 597 aa15.89■□□□□ 0.13
PTPN20-218ENST00000508357 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
PTPN20-218ENST00000508357 STK31Q9BXU1 1019 aa15.89■□□□□ 0.13
PTPN20-218ENST00000508357 BCS1LQ9Y276 419 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms