RNA–Protein interactions for RNA: ENST00000508322.1

PROM1-208, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-208ENST00000508322 C2CD5Q86YS7 1000 aa31.75■■■□□ 2.67
PROM1-208ENST00000508322 NIP7Q9Y221 180 aaKnown RBP eCLIP31.75■■■□□ 2.67
PROM1-208ENST00000508322 ST5P78524 1137 aa31.74■■■□□ 2.67
PROM1-208ENST00000508322 NBPF5PQ86XG9 351 aaPredicted RBP31.74■■■□□ 2.67
PROM1-208ENST00000508322 ERVV-1B6SEH8 477 aa31.73■■■□□ 2.67
PROM1-208ENST00000508322 PDE6BP35913 854 aa31.73■■■□□ 2.67
PROM1-208ENST00000508322 HLFQ16534 295 aa31.73■■■□□ 2.67
PROM1-208ENST00000508322 BRIP1Q9BX63 1249 aa31.73■■■□□ 2.67
PROM1-208ENST00000508322 PDZRN3Q9UPQ7 1066 aa31.73■■■□□ 2.67
PROM1-208ENST00000508322 CCDC24Q8N4L8 307 aa31.72■■■□□ 2.67
PROM1-208ENST00000508322 NECTIN2Q92692 538 aa31.72■■■□□ 2.67
PROM1-208ENST00000508322 UTRNP46939 3433 aa31.72■■■□□ 2.67
PROM1-208ENST00000508322 MAP3K15Q6ZN16 1313 aa31.72■■■□□ 2.67
PROM1-208ENST00000508322 BRCA1P38398 1863 aaKnown RBP31.72■■■□□ 2.67
PROM1-208ENST00000508322 GNAI1P63096 354 aa31.71■■■□□ 2.67
PROM1-208ENST00000508322 TTLL7Q6ZT98 887 aa31.71■■■□□ 2.67
PROM1-208ENST00000508322 KRT24Q2M2I5 525 aa31.7■■■□□ 2.67
PROM1-208ENST00000508322 GOLGB1Q14789 3259 aaKnown RBP31.7■■■□□ 2.66
PROM1-208ENST00000508322 TPTE2Q6XPS3 522 aa31.69■■■□□ 2.66
PROM1-208ENST00000508322 MBIPQ9NS73 344 aa31.69■■■□□ 2.66
PROM1-208ENST00000508322 IFT57Q9NWB7 429 aa31.69■■■□□ 2.66
PROM1-208ENST00000508322 TTLL6Q8N841 843 aa31.68■■■□□ 2.66
PROM1-208ENST00000508322 ZBTB3Q9H5J0 574 aa31.68■■■□□ 2.66
PROM1-208ENST00000508322 FAM177BA6PVY3 158 aa31.67■■■□□ 2.66
PROM1-208ENST00000508322 PDIA6Q15084 440 aa31.67■■■□□ 2.66
PROM1-208ENST00000508322 ZNF622Q969S3 477 aaKnown RBP eCLIP31.67■■■□□ 2.66
PROM1-208ENST00000508322 HOXB7P09629 217 aa31.66■■■□□ 2.66
PROM1-208ENST00000508322 ZNF853P0CG23 659 aa31.66■■■□□ 2.66
PROM1-208ENST00000508322 GTF2E1P29083 439 aaPredicted RBP31.66■■■□□ 2.66
PROM1-208ENST00000508322 ANXA1P04083 346 aa31.65■■■□□ 2.66
PROM1-208ENST00000508322 ARFGEF1Q9Y6D6 1849 aa31.65■■■□□ 2.66
PROM1-208ENST00000508322 PROSER3Q2NL68 480 aa31.64■■■□□ 2.66
PROM1-208ENST00000508322 HDGFL1Q5TGJ6 251 aa31.64■■■□□ 2.66
PROM1-208ENST00000508322 DUSP27Q5VZP5 1158 aa31.64■■■□□ 2.66
PROM1-208ENST00000508322 DDX21Q9NR30 783 aaKnown RBP eCLIP31.64■■■□□ 2.66
PROM1-208ENST00000508322 SENP3-EIF4A1A0A087X0R7 540 aa31.63■■■□□ 2.65
PROM1-208ENST00000508322 AIMP1Q12904 312 aaKnown RBP31.62■■■□□ 2.65
PROM1-208ENST00000508322 GIGYF2Q6Y7W6 1299 aaKnown RBP31.62■■■□□ 2.65
PROM1-208ENST00000508322 LRP10Q7Z4F1 713 aa31.62■■■□□ 2.65
PROM1-208ENST00000508322 ANKRD31Q8N7Z5 1873 aa31.62■■■□□ 2.65
PROM1-208ENST00000508322 NYXQ9GZU5 481 aa31.62■■■□□ 2.65
PROM1-208ENST00000508322 NUP98P52948 1817 aa31.61■■■□□ 2.65
PROM1-208ENST00000508322 CCDC27Q2M243 656 aa31.61■■■□□ 2.65
PROM1-208ENST00000508322 COPS6Q7L5N1 327 aa31.61■■■□□ 2.65
PROM1-208ENST00000508322 GPTP24298 496 aa31.6■■■□□ 2.65
PROM1-208ENST00000508322 XAGE3Q8WTP9 111 aa31.6■■■□□ 2.65
PROM1-208ENST00000508322 DLEC1Q9Y238 1755 aa31.6■■■□□ 2.65
PROM1-208ENST00000508322 CHPF2Q9P2E5 772 aa31.59■■■□□ 2.65
PROM1-208ENST00000508322 ATP10DQ9P241 1426 aa31.58■■■□□ 2.65
PROM1-208ENST00000508322 STYK1Q6J9G0 422 aa31.58■■■□□ 2.65
PROM1-208ENST00000508322 WWC1Q8IX03 1113 aa31.58■■■□□ 2.65
PROM1-208ENST00000508322 FAM9BQ8IZU0 186 aa31.58■■■□□ 2.65
PROM1-208ENST00000508322 CNKSR1Q969H4 720 aa31.58■■■□□ 2.65
PROM1-208ENST00000508322 DBF4Q9UBU7 674 aaPredicted RBP31.58■■■□□ 2.65
PROM1-208ENST00000508322 SRGNP10124 158 aa31.57■■■□□ 2.64
PROM1-208ENST00000508322 MASTLQ96GX5 879 aa31.57■■■□□ 2.64
PROM1-208ENST00000508322 ELL2O00472 640 aaPredicted RBP31.56■■■□□ 2.64
PROM1-208ENST00000508322 NCBP3Q53F19 620 aaKnown RBP31.56■■■□□ 2.64
PROM1-208ENST00000508322 ZNF34Q8IZ26 560 aa31.56■■■□□ 2.64
PROM1-208ENST00000508322 PPP1R42Q7Z4L9 355 aa31.55■■■□□ 2.64
PROM1-208ENST00000508322 ADCY9O60503 1353 aa31.55■■■□□ 2.64
PROM1-208ENST00000508322 PARP10Q53GL7 1025 aa31.54■■■□□ 2.64
PROM1-208ENST00000508322 HSP90AB3PQ58FF7 597 aa31.54■■■□□ 2.64
PROM1-208ENST00000508322 C9orf131Q5VYM1 1079 aa31.54■■■□□ 2.64
PROM1-208ENST00000508322 SALL2Q9Y467 1007 aaPredicted RBP31.54■■■□□ 2.64
PROM1-208ENST00000508322 NPR1P16066 1061 aa31.53■■■□□ 2.64
PROM1-208ENST00000508322 SUSD4Q5VX71 490 aa31.53■■■□□ 2.64
PROM1-208ENST00000508322 NUTM1Q86Y26 1132 aa31.53■■■□□ 2.64
PROM1-208ENST00000508322 ZNF526Q8TF50 670 aaPredicted RBP31.53■■■□□ 2.64
PROM1-208ENST00000508322 CHMP4AQ9BY43 222 aa31.53■■■□□ 2.64
PROM1-208ENST00000508322 GPBP1L1Q9HC44 474 aaPredicted RBP31.53■■■□□ 2.64
PROM1-208ENST00000508322 HYPKQ9NX55 129 aa31.53■■■□□ 2.64
PROM1-208ENST00000508322 ZNF219Q9P2Y4 722 aaPredicted RBP31.53■■■□□ 2.64
PROM1-208ENST00000508322 UBN2Q6ZU65 1347 aa31.52■■■□□ 2.64
PROM1-208ENST00000508322 C21orf2O43822 256 aa31.51■■■□□ 2.63
PROM1-208ENST00000508322 ERFEQ4G0M1 354 aa31.51■■■□□ 2.63
PROM1-208ENST00000508322 C8orf58Q8NAV2 365 aa31.51■■■□□ 2.63
PROM1-208ENST00000508322 COL11A2P13942 1736 aaPredicted RBP31.51■■■□□ 2.63
PROM1-208ENST00000508322 KLRG2A4D1S0 409 aaPredicted RBP31.5■■■□□ 2.63
PROM1-208ENST00000508322 RNF181Q9P0P0 153 aa31.5■■■□□ 2.63
PROM1-208ENST00000508322 IBTKQ9P2D0 1353 aaPredicted RBP31.5■■■□□ 2.63
PROM1-208ENST00000508322 TSR2Q969E8 191 aaKnown RBP31.49■■■□□ 2.63
PROM1-208ENST00000508322 IL16Q14005 1332 aa31.49■■■□□ 2.63
PROM1-208ENST00000508322 RASSF7Q02833 373 aa31.48■■■□□ 2.63
PROM1-208ENST00000508322 TCIRG1Q13488 830 aa31.48■■■□□ 2.63
PROM1-208ENST00000508322 PRPF40BQ6NWY9 871 aaKnown RBP31.48■■■□□ 2.63
PROM1-208ENST00000508322 ANKRD13DQ6ZTN6 518 aa31.48■■■□□ 2.63
PROM1-208ENST00000508322 PLBD2Q8NHP8 589 aa31.48■■■□□ 2.63
PROM1-208ENST00000508322 UTP14AQ9BVJ6 771 aaKnown RBP31.48■■■□□ 2.63
PROM1-208ENST00000508322 NTSR2O95665 410 aa31.46■■■□□ 2.63
PROM1-208ENST00000508322 SOGA3Q5TF21 947 aa31.46■■■□□ 2.63
PROM1-208ENST00000508322 CCDC30Q5VVM6 783 aa31.46■■■□□ 2.63
PROM1-208ENST00000508322 ABCC12Q96J65 1359 aa31.45■■■□□ 2.63
PROM1-208ENST00000508322 ALDH1B1P30837 517 aa31.45■■■□□ 2.63
PROM1-208ENST00000508322 WDR63Q8IWG1 891 aa31.45■■■□□ 2.63
PROM1-208ENST00000508322 LMNB1P20700 586 aa31.44■■■□□ 2.62
PROM1-208ENST00000508322 NLRP10Q86W26 655 aa31.43■■■□□ 2.62
PROM1-208ENST00000508322 TSPYL6Q8N831 410 aa31.43■■■□□ 2.62
PROM1-208ENST00000508322 RPGRQ92834 1020 aaKnown RBP31.43■■■□□ 2.62
PROM1-208ENST00000508322 SLX4Q8IY92 1834 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms