RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 DDR1Q08345 913 aa28.86■■■□□ 2.21
SNCB-204ENST00000508006 INTS5Q6P9B9 1019 aaKnown RBP28.86■■■□□ 2.21
SNCB-204ENST00000508006 BRCA1P38398 1863 aaKnown RBP28.85■■■□□ 2.21
SNCB-204ENST00000508006 PRAMEF22A3QJZ6 481 aa28.85■■■□□ 2.21
SNCB-204ENST00000508006 CHRNA5P30532 468 aa28.84■■■□□ 2.21
SNCB-204ENST00000508006 KRT24Q2M2I5 525 aa28.84■■■□□ 2.21
SNCB-204ENST00000508006 USPL1Q5W0Q7 1092 aa28.84■■■□□ 2.21
SNCB-204ENST00000508006 C8orf58Q8NAV2 365 aa28.84■■■□□ 2.21
SNCB-204ENST00000508006 CDCA7LQ96GN5 454 aa28.84■■■□□ 2.21
SNCB-204ENST00000508006 RNF181Q9P0P0 153 aa28.84■■■□□ 2.21
SNCB-204ENST00000508006 KDM2BQ8NHM5 1336 aa28.84■■■□□ 2.21
SNCB-204ENST00000508006 ARFGEF1Q9Y6D6 1849 aa28.83■■■□□ 2.21
SNCB-204ENST00000508006 POLRMTO00411 1230 aaKnown RBP28.82■■■□□ 2.2
SNCB-204ENST00000508006 TM4SF1P30408 202 aa28.82■■■□□ 2.2
SNCB-204ENST00000508006 EXOSC9Q06265 439 aaKnown RBP28.82■■■□□ 2.2
SNCB-204ENST00000508006 TWISTNBQ3B726 338 aaPredicted RBP28.82■■■□□ 2.2
SNCB-204ENST00000508006 RBM46Q8TBY0 533 aaKnown RBP28.82■■■□□ 2.2
SNCB-204ENST00000508006 IL6STP40189 918 aaPredicted RBP28.8■■■□□ 2.2
SNCB-204ENST00000508006 ZBTB1Q9Y2K1 713 aa28.8■■■□□ 2.2
SNCB-204ENST00000508006 CACNA1FO60840 1977 aa28.79■■■□□ 2.2
SNCB-204ENST00000508006 A1BGP04217 495 aa28.79■■■□□ 2.2
SNCB-204ENST00000508006 HDGFL1Q5TGJ6 251 aa28.79■■■□□ 2.2
SNCB-204ENST00000508006 DNAJC5GQ8N7S2 189 aa28.79■■■□□ 2.2
SNCB-204ENST00000508006 TSPYL6Q8N831 410 aa28.79■■■□□ 2.2
SNCB-204ENST00000508006 CT47B1P0C2W7 299 aaPredicted RBP28.78■■■□□ 2.2
SNCB-204ENST00000508006 EIF2S2P20042 333 aaKnown RBP28.78■■■□□ 2.2
SNCB-204ENST00000508006 RRAGCQ9HB90 399 aa28.78■■■□□ 2.2
SNCB-204ENST00000508006 ELL2O00472 640 aaPredicted RBP28.77■■■□□ 2.2
SNCB-204ENST00000508006 EIF5P55010 431 aaKnown RBP28.77■■■□□ 2.2
SNCB-204ENST00000508006 CCDC30Q5VVM6 783 aa28.77■■■□□ 2.2
SNCB-204ENST00000508006 ZNF428Q96B54 188 aa28.77■■■□□ 2.2
SNCB-204ENST00000508006 VAMP4O75379 141 aa28.76■■■□□ 2.19
SNCB-204ENST00000508006 CANXP27824 592 aaKnown RBP28.76■■■□□ 2.19
SNCB-204ENST00000508006 NPM2Q86SE8 214 aaKnown RBP28.76■■■□□ 2.19
SNCB-204ENST00000508006 DBF4Q9UBU7 674 aaPredicted RBP28.76■■■□□ 2.19
SNCB-204ENST00000508006 NARFQ9UHQ1 456 aa28.76■■■□□ 2.19
SNCB-204ENST00000508006 A0A087WZG4 1122 aa28.75■■■□□ 2.19
SNCB-204ENST00000508006 FSTL1Q12841 308 aa28.75■■■□□ 2.19
SNCB-204ENST00000508006 DDX21Q9NR30 783 aaKnown RBP eCLIP28.75■■■□□ 2.19
SNCB-204ENST00000508006 COL15A1P39059 1388 aa28.75■■■□□ 2.19
SNCB-204ENST00000508006 NBPF26B4DH59 902 aa28.74■■■□□ 2.19
SNCB-204ENST00000508006 NBPF10Q6P3W6 841 aaKnown RBP28.74■■■□□ 2.19
SNCB-204ENST00000508006 NBPF15Q8N660 670 aa28.74■■■□□ 2.19
SNCB-204ENST00000508006 NFIXQ14938 502 aa28.73■■■□□ 2.19
SNCB-204ENST00000508006 SERPINB2P05120 415 aa28.72■■■□□ 2.19
SNCB-204ENST00000508006 PDIA6Q15084 440 aa28.72■■■□□ 2.19
SNCB-204ENST00000508006 HYPKQ9NX55 129 aa28.71■■■□□ 2.19
SNCB-204ENST00000508006 STK31Q9BXU1 1019 aa28.7■■■□□ 2.18
SNCB-204ENST00000508006 CHPF2Q9P2E5 772 aa28.7■■■□□ 2.18
SNCB-204ENST00000508006 SBF1O95248 1867 aa28.7■■■□□ 2.18
SNCB-204ENST00000508006 HTRA3P83110 453 aa28.69■■■□□ 2.18
SNCB-204ENST00000508006 NECTIN2Q92692 538 aa28.69■■■□□ 2.18
SNCB-204ENST00000508006 YTHDC1Q96MU7 727 aaKnown RBP28.69■■■□□ 2.18
SNCB-204ENST00000508006 BCORQ6W2J9 1755 aa28.68■■■□□ 2.18
SNCB-204ENST00000508006 RGL2O15211 777 aa28.68■■■□□ 2.18
SNCB-204ENST00000508006 RASSF7Q02833 373 aa28.68■■■□□ 2.18
SNCB-204ENST00000508006 LRP10Q7Z4F1 713 aa28.68■■■□□ 2.18
SNCB-204ENST00000508006 TTLL6Q8N841 843 aa28.68■■■□□ 2.18
SNCB-204ENST00000508006 WDR90Q96KV7 1748 aa28.68■■■□□ 2.18
SNCB-204ENST00000508006 SCN7AQ01118 1682 aa28.67■■■□□ 2.18
SNCB-204ENST00000508006 H0YIN7 160 aa28.67■■■□□ 2.18
SNCB-204ENST00000508006 MYL6BP14649 208 aa28.67■■■□□ 2.18
SNCB-204ENST00000508006 BICDL1Q6ZP65 573 aa28.67■■■□□ 2.18
SNCB-204ENST00000508006 C2CD5Q86YS7 1000 aa28.67■■■□□ 2.18
SNCB-204ENST00000508006 KLRG1Q96E93 195 aa28.67■■■□□ 2.18
SNCB-204ENST00000508006 AFDNP55196 1824 aaKnown RBP28.66■■■□□ 2.18
SNCB-204ENST00000508006 LMNB1P20700 586 aa28.66■■■□□ 2.18
SNCB-204ENST00000508006 PIP4K2AP48426 406 aaPredicted RBP28.66■■■□□ 2.18
SNCB-204ENST00000508006 SMC1BQ8NDV3 1235 aa28.66■■■□□ 2.18
SNCB-204ENST00000508006 BCL2L12Q9HB09 334 aa28.65■■■□□ 2.18
SNCB-204ENST00000508006 ZNF330Q9Y3S2 320 aaPredicted RBP28.65■■■□□ 2.18
SNCB-204ENST00000508006 PROSER3Q2NL68 480 aa28.64■■■□□ 2.18
SNCB-204ENST00000508006 ALDH1L2Q3SY69 923 aa28.64■■■□□ 2.18
SNCB-204ENST00000508006 DZIP3Q86Y13 1208 aaKnown RBP28.64■■■□□ 2.18
SNCB-204ENST00000508006 ZC3H4Q9UPT8 1303 aaKnown RBP28.64■■■□□ 2.17
SNCB-204ENST00000508006 TNRC6CQ9HCJ0 1690 aaKnown RBP28.62■■■□□ 2.17
SNCB-204ENST00000508006 ERVV-1B6SEH8 477 aa28.62■■■□□ 2.17
SNCB-204ENST00000508006 VEGFAP15692 232 aaPredicted RBP28.62■■■□□ 2.17
SNCB-204ENST00000508006 GLTPD2A6NH11 291 aa28.61■■■□□ 2.17
SNCB-204ENST00000508006 SLC4A2P04920 1241 aa28.61■■■□□ 2.17
SNCB-204ENST00000508006 KIF6Q6ZMV9 814 aa28.61■■■□□ 2.17
SNCB-204ENST00000508006 ANXA1P04083 346 aa28.6■■■□□ 2.17
SNCB-204ENST00000508006 CLEC4GQ6UXB4 293 aa28.6■■■□□ 2.17
SNCB-204ENST00000508006 COPS6Q7L5N1 327 aa28.6■■■□□ 2.17
SNCB-204ENST00000508006 ZNF622Q969S3 477 aaKnown RBP eCLIP28.6■■■□□ 2.17
SNCB-204ENST00000508006 TBC1D2BQ9UPU7 963 aa28.6■■■□□ 2.17
SNCB-204ENST00000508006 XAGE3Q8WTP9 111 aa28.59■■■□□ 2.17
SNCB-204ENST00000508006 MAP3K15Q6ZN16 1313 aa28.59■■■□□ 2.17
SNCB-204ENST00000508006 NUP98P52948 1817 aa28.59■■■□□ 2.17
SNCB-204ENST00000508006 CAMTA2O94983 1202 aa28.58■■■□□ 2.17
SNCB-204ENST00000508006 ZNF652Q9Y2D9 606 aa28.58■■■□□ 2.17
SNCB-204ENST00000508006 NRXN2Q9P2S2 1712 aa28.57■■■□□ 2.16
SNCB-204ENST00000508006 NPHP1O15259 732 aa28.57■■■□□ 2.16
SNCB-204ENST00000508006 DDX58O95786 925 aaKnown RBP28.57■■■□□ 2.16
SNCB-204ENST00000508006 DPY19L2Q6NUT2 758 aa28.57■■■□□ 2.16
SNCB-204ENST00000508006 JMYQ8N9B5 988 aa28.57■■■□□ 2.16
SNCB-204ENST00000508006 PDE6BP35913 854 aa28.56■■■□□ 2.16
SNCB-204ENST00000508006 BRPF1P55201 1214 aaPredicted RBP28.56■■■□□ 2.16
SNCB-204ENST00000508006 CCDC88AQ3V6T2 1871 aa28.56■■■□□ 2.16
SNCB-204ENST00000508006 TBC1D9BQ66K14 1250 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms