RNA–Protein interactions for RNA: ENST00000507879.5

TNIP3-203, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP3, Length 1,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-203ENST00000507879 CLIP2Q9UDT6 1046 aa11.69□□□□□ -0.54
TNIP3-203ENST00000507879 YTHDC2Q9H6S0 1430 aaKnown RBP11.68□□□□□ -0.54
TNIP3-203ENST00000507879 PNPLA6Q8IY17 1366 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 KIAA0232Q92628 1395 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 SETD1AO15047 1707 aaKnown RBP11.68□□□□□ -0.54
TNIP3-203ENST00000507879 ACTN2P35609 894 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 TSGA10IPQ3SY00 556 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 C10orf67Q8IYJ2 551 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 SMARCE1Q969G3 411 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 TACO1Q9BSH4 297 aaKnown RBP11.68□□□□□ -0.54
TNIP3-203ENST00000507879 CARD10Q9BWT7 1032 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 TRIM5Q9C035 493 aa11.68□□□□□ -0.54
TNIP3-203ENST00000507879 CDK12Q9NYV4 1490 aaPredicted RBP11.68□□□□□ -0.54
TNIP3-203ENST00000507879 CPSF1Q10570 1443 aaKnown RBP11.68□□□□□ -0.54
TNIP3-203ENST00000507879 CCZ1BP86790 482 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 CCZ1P86791 482 aaPredicted RBP11.67□□□□□ -0.54
TNIP3-203ENST00000507879 DRC7Q8IY82 874 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 PPM1EQ8WY54 764 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 TRERF1Q96PN7 1200 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 DEF6Q9H4E7 631 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 MED4Q9NPJ6 270 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
TNIP3-203ENST00000507879 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.67□□□□□ -0.54
TNIP3-203ENST00000507879 AOX1Q06278 1338 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 PHLPP2Q6ZVD8 1323 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 SALL3Q9BXA9 1300 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 CCP110O43303 1012 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 REXO1L1PQ8IX06 675 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.67□□□□□ -0.54
TNIP3-203ENST00000507879 C1orf115Q9H7X2 142 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 IMPACTQ9P2X3 320 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 MKRN1Q9UHC7 482 aaKnown RBP11.67□□□□□ -0.54
TNIP3-203ENST00000507879 NRBP1Q9UHY1 535 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 ZFYVE9O95405 1425 aa11.67□□□□□ -0.54
TNIP3-203ENST00000507879 TRIM66O15016 1216 aa11.66□□□□□ -0.54
TNIP3-203ENST00000507879 SYT1P21579 422 aa11.66□□□□□ -0.54
TNIP3-203ENST00000507879 SATB1Q01826 763 aa11.66□□□□□ -0.54
TNIP3-203ENST00000507879 OSBPL5Q9H0X9 879 aaPredicted RBP11.66□□□□□ -0.54
TNIP3-203ENST00000507879 LRRC7Q96NW7 1537 aa11.66□□□□□ -0.54
TNIP3-203ENST00000507879 EFCAB8A8MWE9 144 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 ZNF853P0CG23 659 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 CCDC144BQ3MJ40 725 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 JAKMIP3Q5VZ66 844 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 MCTP2Q6DN12 878 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 CCDC144CPQ8IYA2 1237 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 BANK1Q8NDB2 785 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 TTC14Q96N46 770 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 CLSTN2Q9H4D0 955 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 LCMT1Q9UIC8 334 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 TTC21AQ8NDW8 1320 aa11.65□□□□□ -0.54
TNIP3-203ENST00000507879 SKILP12757 684 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 OAS2P29728 719 aaKnown RBP11.64□□□□□ -0.55
TNIP3-203ENST00000507879 HSPA4P34932 840 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 PDE1AP54750 535 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 CORO7P57737 925 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 SRPK2P78362 688 aaKnown RBP11.64□□□□□ -0.55
TNIP3-203ENST00000507879 TRDNQ13061 729 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 ERCC6LQ2NKX8 1250 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 ARHGAP29Q52LW3 1261 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 CEP85Q6P2H3 762 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 LUZP1Q86V48 1076 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 ZNF592Q92610 1267 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 MTMR6Q9Y217 621 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 MSH6P52701 1360 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 CRYBG1Q9Y4K1 1723 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 FIBPO43427 364 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 TADA3O75528 432 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 TBC1D8O95759 1140 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 GNAI1P63096 354 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 ST5P78524 1137 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 SNW1Q13573 536 aaKnown RBP11.64□□□□□ -0.55
TNIP3-203ENST00000507879 SMC1AQ14683 1233 aaKnown RBP11.64□□□□□ -0.55
TNIP3-203ENST00000507879 ANO6Q4KMQ2 910 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 CT47A1Q5JQC4 288 aaPredicted RBP11.64□□□□□ -0.55
TNIP3-203ENST00000507879 MMS22LQ6ZRQ5 1243 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 C16orf71Q8IYS4 520 aaPredicted RBP11.64□□□□□ -0.55
TNIP3-203ENST00000507879 PALD1Q9ULE6 856 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 PREX1Q8TCU6 1659 aa11.64□□□□□ -0.55
TNIP3-203ENST00000507879 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
TNIP3-203ENST00000507879 NPHP3Q7Z494 1330 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 PPLO60437 1756 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
TNIP3-203ENST00000507879 USP27XA6NNY8 438 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 HMMRO75330 724 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 FCHSD2O94868 740 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 MYCNP04198 464 aaPredicted RBP11.63□□□□□ -0.55
TNIP3-203ENST00000507879 CASTP20810 708 aaKnown RBP11.63□□□□□ -0.55
TNIP3-203ENST00000507879 HAP1P54257 671 aaPredicted RBP11.63□□□□□ -0.55
TNIP3-203ENST00000507879 KRT85P78386 507 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 IQCB1Q15051 598 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 LEKR1Q6ZMV7 388 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 CCDC150Q8NCX0 1101 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 UBXN4Q92575 508 aa11.63□□□□□ -0.55
TNIP3-203ENST00000507879 ZSCAN31Q96LW9 406 aaPredicted RBP11.63□□□□□ -0.55
TNIP3-203ENST00000507879 FAM107BQ9H098 131 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms