RNA–Protein interactions for RNA: ENST00000507458.2

SMN2-207, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-207ENST00000507458 KHNYNO15037 678 aaKnown RBP10.07□□□□□ -0.8
SMN2-207ENST00000507458 MAPTP10636 758 aaKnown RBP10.07□□□□□ -0.8
SMN2-207ENST00000507458 ATP1A2P50993 1020 aa10.07□□□□□ -0.8
SMN2-207ENST00000507458 TNP2Q05952 138 aa10.07□□□□□ -0.8
SMN2-207ENST00000507458 ZIC5Q96T25 663 aa10.07□□□□□ -0.8
SMN2-207ENST00000507458 MAFBQ9Y5Q3 323 aaPredicted RBP10.07□□□□□ -0.8
SMN2-207ENST00000507458 PARP3Q9Y6F1 533 aa10.07□□□□□ -0.8
SMN2-207ENST00000507458 USP17L3A6NCW0 530 aa10.06□□□□□ -0.8
SMN2-207ENST00000507458 USP17L4A6NCW7 530 aa10.06□□□□□ -0.8
SMN2-207ENST00000507458 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
SMN2-207ENST00000507458 FAM182BQ5T319 152 aa10.06□□□□□ -0.8
SMN2-207ENST00000507458 USP17L2Q6R6M4 530 aa10.06□□□□□ -0.8
SMN2-207ENST00000507458 USP17L1Q7RTZ2 530 aa10.06□□□□□ -0.8
SMN2-207ENST00000507458 TFIP11Q9UBB9 837 aaKnown RBP10.06□□□□□ -0.8
SMN2-207ENST00000507458 NEURL1BA8MQ27 555 aa10.05□□□□□ -0.8
SMN2-207ENST00000507458 PIK3R2O00459 728 aa10.05□□□□□ -0.8
SMN2-207ENST00000507458 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
SMN2-207ENST00000507458 EPXP11678 715 aa10.05□□□□□ -0.8
SMN2-207ENST00000507458 CD33P20138 364 aa10.05□□□□□ -0.8
SMN2-207ENST00000507458 TPCN2Q8NHX9 752 aa10.05□□□□□ -0.8
SMN2-207ENST00000507458 L3MBTL2Q969R5 705 aa10.05□□□□□ -0.8
SMN2-207ENST00000507458 MSTNO14793 375 aa10.04□□□□□ -0.8
SMN2-207ENST00000507458 ADH6P28332 368 aa10.04□□□□□ -0.8
SMN2-207ENST00000507458 TXLNAP40222 546 aa10.04□□□□□ -0.8
SMN2-207ENST00000507458 TEAD4Q15561 434 aa10.04□□□□□ -0.8
SMN2-207ENST00000507458 SAMD5Q5TGI4 173 aa10.04□□□□□ -0.8
SMN2-207ENST00000507458 SLC9A9Q8IVB4 645 aa10.04□□□□□ -0.8
SMN2-207ENST00000507458 C1orf115Q9H7X2 142 aa10.04□□□□□ -0.8
SMN2-207ENST00000507458 ZNF232Q9UNY5 417 aa10.04□□□□□ -0.8
SMN2-207ENST00000507458 NOS2P35228 1153 aa10.03□□□□□ -0.8
SMN2-207ENST00000507458 EPHA4P54764 986 aa10.03□□□□□ -0.8
SMN2-207ENST00000507458 ALYREFQ86V81 257 aaKnown RBP10.03□□□□□ -0.8
SMN2-207ENST00000507458 TNS4Q8IZW8 715 aa10.03□□□□□ -0.8
SMN2-207ENST00000507458 ZDHHC1Q8WTX9 485 aa10.03□□□□□ -0.8
SMN2-207ENST00000507458 AVENQ9NQS1 362 aaPredicted RBP10.03□□□□□ -0.8
SMN2-207ENST00000507458 CCDC102BQ68D86 513 aa10.02□□□□□ -0.81
SMN2-207ENST00000507458 BTBD6Q96KE9 485 aa10.02□□□□□ -0.81
SMN2-207ENST00000507458 NEUROD4Q9HD90 331 aa10.02□□□□□ -0.81
SMN2-207ENST00000507458 PRR12Q9ULL5 1215 aa10.02□□□□□ -0.81
SMN2-207ENST00000507458 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.81
SMN2-207ENST00000507458 PRDM2Q13029 1718 aa10.02□□□□□ -0.81
SMN2-207ENST00000507458 SERTM1A2A2V5 107 aa10.01□□□□□ -0.81
SMN2-207ENST00000507458 LMOD1P29536 600 aaPredicted RBP10.01□□□□□ -0.81
SMN2-207ENST00000507458 CLDN10P78369 228 aa10.01□□□□□ -0.81
SMN2-207ENST00000507458 LAMC2Q13753 1193 aa10.01□□□□□ -0.81
SMN2-207ENST00000507458 TBCELQ5QJ74 424 aa10.01□□□□□ -0.81
SMN2-207ENST00000507458 CFAP70Q5T0N1 1121 aa10.01□□□□□ -0.81
SMN2-207ENST00000507458 MARK1Q9P0L2 795 aa10.01□□□□□ -0.81
SMN2-207ENST00000507458 CHMP3Q9Y3E7 222 aa10.01□□□□□ -0.81
SMN2-207ENST00000507458 RBM19Q9Y4C8 960 aaKnown RBP10.01□□□□□ -0.81
SMN2-207ENST00000507458 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
SMN2-207ENST00000507458 PPP1R15AO75807 674 aaPredicted RBP10□□□□□ -0.81
SMN2-207ENST00000507458 OGFOD1Q8N543 542 aa10□□□□□ -0.81
SMN2-207ENST00000507458 SPOCK3Q9BQ16 436 aa10□□□□□ -0.81
SMN2-207ENST00000507458 HCN2Q9UL51 889 aa10□□□□□ -0.81
SMN2-207ENST00000507458 KIAA1024Q9UPX6 916 aa10□□□□□ -0.81
SMN2-207ENST00000507458 GPC6Q9Y625 555 aaPredicted RBP10□□□□□ -0.81
SMN2-207ENST00000507458 EML1O00423 815 aa9.99□□□□□ -0.81
SMN2-207ENST00000507458 GNB5O14775 395 aa9.99□□□□□ -0.81
SMN2-207ENST00000507458 EFSO43281 561 aa9.99□□□□□ -0.81
SMN2-207ENST00000507458 ZNF468Q5VIY5 522 aaPredicted RBP9.99□□□□□ -0.81
SMN2-207ENST00000507458 LRRC69Q6ZNQ3 347 aa9.99□□□□□ -0.81
SMN2-207ENST00000507458 LARGE2Q8N3Y3 721 aa9.99□□□□□ -0.81
SMN2-207ENST00000507458 VRTNQ9H8Y1 702 aa9.99□□□□□ -0.81
SMN2-207ENST00000507458 MKRN1Q9UHC7 482 aaKnown RBP9.99□□□□□ -0.81
SMN2-207ENST00000507458 HOXB4P17483 251 aaPredicted RBP9.98□□□□□ -0.81
SMN2-207ENST00000507458 PSMA6P60900 246 aaKnown RBP9.98□□□□□ -0.81
SMN2-207ENST00000507458 GRIN2CQ14957 1233 aa9.98□□□□□ -0.81
SMN2-207ENST00000507458 LINC00114Q6XXX2 140 aa9.98□□□□□ -0.81
SMN2-207ENST00000507458 PBXIP1Q96AQ6 731 aa9.98□□□□□ -0.81
SMN2-207ENST00000507458 ZNF608Q9ULD9 1512 aaPredicted RBP9.97□□□□□ -0.81
SMN2-207ENST00000507458 M0R2N6 131 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 ITGB2P05107 769 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 COL8A1P27658 744 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 DGKGP49619 791 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 PCBP4P57723 403 aaKnown RBP9.97□□□□□ -0.81
SMN2-207ENST00000507458 CHSY3Q70JA7 882 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 FCHSD1Q86WN1 690 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 RHPN1Q8TCX5 695 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 TSPAN10Q9H1Z9 355 aaPredicted RBP9.97□□□□□ -0.81
SMN2-207ENST00000507458 KLF15Q9UIH9 416 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 IFT140Q96RY7 1462 aa9.97□□□□□ -0.81
SMN2-207ENST00000507458 LOC100996750A0A140TA64 210 aa9.96□□□□□ -0.82
SMN2-207ENST00000507458 KRBA1A5PL33 1030 aa9.96□□□□□ -0.82
SMN2-207ENST00000507458 LARP1Q6PKG0 1096 aaKnown RBP9.96□□□□□ -0.82
SMN2-207ENST00000507458 ZNF594Q96JF6 807 aaPredicted RBP9.96□□□□□ -0.82
SMN2-207ENST00000507458 KRTAP4-6Q9BYQ5 205 aa9.96□□□□□ -0.82
SMN2-207ENST00000507458 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
SMN2-207ENST00000507458 NOP53Q9NZM5 478 aaKnown RBP9.96□□□□□ -0.82
SMN2-207ENST00000507458 TOPBP1Q92547 1522 aa9.96□□□□□ -0.82
SMN2-207ENST00000507458 FAM196BA6NMK8 535 aa9.95□□□□□ -0.82
SMN2-207ENST00000507458 SH3PXD2AQ5TCZ1 1133 aa9.95□□□□□ -0.82
SMN2-207ENST00000507458 SIX5Q8N196 739 aa9.95□□□□□ -0.82
SMN2-207ENST00000507458 SUV39H2Q9H5I1 410 aa9.95□□□□□ -0.82
SMN2-207ENST00000507458 PROCP04070 461 aa9.94□□□□□ -0.82
SMN2-207ENST00000507458 KANK4Q5T7N3 995 aaPredicted RBP9.94□□□□□ -0.82
SMN2-207ENST00000507458 C1orf53Q5VUE5 145 aa9.94□□□□□ -0.82
SMN2-207ENST00000507458 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
SMN2-207ENST00000507458 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
SMN2-207ENST00000507458 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms