RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SOS1Q07889 1333 aaPredicted RBP11.36□□□□□ -0.59
SCAMP1-202ENST00000506858 PNPLA7Q6ZV29 1317 aa11.36□□□□□ -0.59
SCAMP1-202ENST00000506858 BCAR3O75815 825 aa11.36□□□□□ -0.59
SCAMP1-202ENST00000506858 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
SCAMP1-202ENST00000506858 LRP10Q7Z4F1 713 aa11.36□□□□□ -0.59
SCAMP1-202ENST00000506858 XAGE3Q8WTP9 111 aa11.36□□□□□ -0.59
SCAMP1-202ENST00000506858 RREB1Q92766 1687 aa11.35□□□□□ -0.59
SCAMP1-202ENST00000506858 TRAPPC3LQ5T215 181 aa11.35□□□□□ -0.59
SCAMP1-202ENST00000506858 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
SCAMP1-202ENST00000506858 COPS6Q7L5N1 327 aa11.35□□□□□ -0.59
SCAMP1-202ENST00000506858 DDX21Q9NR30 783 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCAMP1-202ENST00000506858 HOXB7P09629 217 aa11.35□□□□□ -0.59
SCAMP1-202ENST00000506858 RARSP54136 660 aaKnown RBP11.35□□□□□ -0.59
SCAMP1-202ENST00000506858 ZBTB3Q9H5J0 574 aa11.35□□□□□ -0.59
SCAMP1-202ENST00000506858 COL5A3P25940 1745 aaPredicted RBP11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 ZBTB7AO95365 584 aa11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 IL6STP40189 918 aaPredicted RBP11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 HLFQ16534 295 aa11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 USPL1Q5W0Q7 1092 aa11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 STK31Q9BXU1 1019 aa11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 SMC4Q9NTJ3 1288 aa11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 DBF4Q9UBU7 674 aaPredicted RBP11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 TNNQ9UQP3 1299 aa11.34□□□□□ -0.59
SCAMP1-202ENST00000506858 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
SCAMP1-202ENST00000506858 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
SCAMP1-202ENST00000506858 RFC4P35249 363 aa11.33□□□□□ -0.6
SCAMP1-202ENST00000506858 COL15A1P39059 1388 aa11.33□□□□□ -0.6
SCAMP1-202ENST00000506858 F6X3S4 739 aa11.32□□□□□ -0.6
SCAMP1-202ENST00000506858 FKBP8Q14318 412 aa11.32□□□□□ -0.6
SCAMP1-202ENST00000506858 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
SCAMP1-202ENST00000506858 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
SCAMP1-202ENST00000506858 ZNF831Q5JPB2 1677 aa11.32□□□□□ -0.6
SCAMP1-202ENST00000506858 CAMTA2O94983 1202 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 SSFA2P28290 1259 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 HYPKQ9NX55 129 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 NOB1Q9ULX3 412 aaKnown RBP11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 TUBGCP6Q96RT7 1819 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 PLIN1O60240 522 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 ZPR1O75312 459 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 GPTP24298 496 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 FLIIQ13045 1269 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 FRAT1Q92837 279 aaPredicted RBP11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 RCAN3Q9UKA8 241 aa11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
SCAMP1-202ENST00000506858 ERBB4Q15303 1308 aa11.3□□□□□ -0.6
SCAMP1-202ENST00000506858 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
SCAMP1-202ENST00000506858 PI4KAP2A4QPH2 592 aa11.3□□□□□ -0.6
SCAMP1-202ENST00000506858 ATP5J2-PTCD1G3V325 749 aa11.3□□□□□ -0.6
SCAMP1-202ENST00000506858 GYS1P13807 737 aa11.3□□□□□ -0.6
SCAMP1-202ENST00000506858 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
SCAMP1-202ENST00000506858 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
SCAMP1-202ENST00000506858 PI4KAP1Q8N8J0 262 aa11.3□□□□□ -0.6
SCAMP1-202ENST00000506858 USP42Q9H9J4 1324 aaKnown RBP11.29□□□□□ -0.6
SCAMP1-202ENST00000506858 TBC1D9BQ66K14 1250 aa11.29□□□□□ -0.6
SCAMP1-202ENST00000506858 KIF6Q6ZMV9 814 aa11.29□□□□□ -0.6
SCAMP1-202ENST00000506858 RIC3Q7Z5B4 369 aa11.29□□□□□ -0.6
SCAMP1-202ENST00000506858 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
SCAMP1-202ENST00000506858 JARID2Q92833 1246 aaPredicted RBP11.29□□□□□ -0.6
SCAMP1-202ENST00000506858 CICQ96RK0 1608 aaPredicted RBP11.29□□□□□ -0.6
SCAMP1-202ENST00000506858 MAP3K15Q6ZN16 1313 aa11.29□□□□□ -0.6
SCAMP1-202ENST00000506858 A0A087WZG4 1122 aa11.28□□□□□ -0.6
SCAMP1-202ENST00000506858 ALDH1L2Q3SY69 923 aa11.28□□□□□ -0.6
SCAMP1-202ENST00000506858 CLUAP1Q96AJ1 413 aa11.28□□□□□ -0.6
SCAMP1-202ENST00000506858 MAP3K2Q9Y2U5 619 aa11.28□□□□□ -0.6
SCAMP1-202ENST00000506858 ADCY9O60503 1353 aa11.28□□□□□ -0.6
SCAMP1-202ENST00000506858 CT47B1P0C2W7 299 aaPredicted RBP11.27□□□□□ -0.6
SCAMP1-202ENST00000506858 SLC4A10Q6U841 1118 aa11.27□□□□□ -0.6
SCAMP1-202ENST00000506858 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.6
SCAMP1-202ENST00000506858 MYD88Q99836 296 aa11.27□□□□□ -0.6
SCAMP1-202ENST00000506858 DDR1Q08345 913 aa11.27□□□□□ -0.61
SCAMP1-202ENST00000506858 NFIXQ14938 502 aa11.27□□□□□ -0.61
SCAMP1-202ENST00000506858 KSR2Q6VAB6 950 aa11.27□□□□□ -0.61
SCAMP1-202ENST00000506858 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
SCAMP1-202ENST00000506858 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
SCAMP1-202ENST00000506858 MMP10P09238 476 aa11.26□□□□□ -0.61
SCAMP1-202ENST00000506858 RTL5Q5HYW3 569 aaPredicted RBP11.26□□□□□ -0.61
SCAMP1-202ENST00000506858 SYNE4Q8N205 404 aa11.26□□□□□ -0.61
SCAMP1-202ENST00000506858 NIP7Q9Y221 180 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCAMP1-202ENST00000506858 IGKV5-2P06315 115 aa11.25□□□□□ -0.61
SCAMP1-202ENST00000506858 HMGB2P26583 209 aaKnown RBP11.25□□□□□ -0.61
SCAMP1-202ENST00000506858 CWF19L2Q2TBE0 894 aaKnown RBP11.25□□□□□ -0.61
SCAMP1-202ENST00000506858 GIGYF2Q6Y7W6 1299 aaKnown RBP11.25□□□□□ -0.61
SCAMP1-202ENST00000506858 DNAAF4Q8WXU2 420 aa11.25□□□□□ -0.61
SCAMP1-202ENST00000506858 CHMP4AQ9BY43 222 aa11.25□□□□□ -0.61
SCAMP1-202ENST00000506858 C4AP0C0L4 1744 aa11.25□□□□□ -0.61
SCAMP1-202ENST00000506858 UBN2Q6ZU65 1347 aa11.25□□□□□ -0.61
SCAMP1-202ENST00000506858 ERVV-1B6SEH8 477 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 RLBP1P12271 317 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 TM4SF1P30408 202 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 C20orf194Q5TEA3 1177 aa11.24□□□□□ -0.61
SCAMP1-202ENST00000506858 SUSD4Q5VX71 490 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms