RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
DDR1-258ENST00000506573 AFDNP55196 1824 aaKnown RBP20.34■□□□□ 0.85
DDR1-258ENST00000506573 BRCA1P38398 1863 aaKnown RBP20.33■□□□□ 0.85
DDR1-258ENST00000506573 ARFGEF1Q9Y6D6 1849 aa20.33■□□□□ 0.85
DDR1-258ENST00000506573 NGEFQ8N5V2 710 aa20.33■□□□□ 0.85
DDR1-258ENST00000506573 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
DDR1-258ENST00000506573 SENP3-EIF4A1A0A087X0R7 540 aa20.32■□□□□ 0.84
DDR1-258ENST00000506573 ERVV-1B6SEH8 477 aa20.32■□□□□ 0.84
DDR1-258ENST00000506573 RNF181Q9P0P0 153 aa20.32■□□□□ 0.84
DDR1-258ENST00000506573 ADAMTS8Q9UP79 889 aa20.32■□□□□ 0.84
DDR1-258ENST00000506573 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
DDR1-258ENST00000506573 MYL6BP14649 208 aa20.31■□□□□ 0.84
DDR1-258ENST00000506573 NYXQ9GZU5 481 aa20.31■□□□□ 0.84
DDR1-258ENST00000506573 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
DDR1-258ENST00000506573 KDM2BQ8NHM5 1336 aa20.3■□□□□ 0.84
DDR1-258ENST00000506573 SOGA3Q5TF21 947 aa20.3■□□□□ 0.84
DDR1-258ENST00000506573 STYK1Q6J9G0 422 aa20.3■□□□□ 0.84
DDR1-258ENST00000506573 MASTLQ96GX5 879 aa20.3■□□□□ 0.84
DDR1-258ENST00000506573 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
DDR1-258ENST00000506573 ZC3H4Q9UPT8 1303 aaKnown RBP20.29■□□□□ 0.84
DDR1-258ENST00000506573 BCORQ6W2J9 1755 aa20.29■□□□□ 0.84
DDR1-258ENST00000506573 LMNB1P20700 586 aa20.29■□□□□ 0.84
DDR1-258ENST00000506573 CALD1Q05682 793 aaKnown RBP20.29■□□□□ 0.84
DDR1-258ENST00000506573 CCDC24Q8N4L8 307 aa20.29■□□□□ 0.84
DDR1-258ENST00000506573 LAS1LQ9Y4W2 734 aaKnown RBP20.29■□□□□ 0.84
DDR1-258ENST00000506573 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
DDR1-258ENST00000506573 SRGNP10124 158 aa20.27■□□□□ 0.84
DDR1-258ENST00000506573 C16orf71Q8IYS4 520 aaPredicted RBP20.27■□□□□ 0.84
DDR1-258ENST00000506573 FAM177BA6PVY3 158 aa20.26■□□□□ 0.83
DDR1-258ENST00000506573 NPR1P16066 1061 aa20.26■□□□□ 0.83
DDR1-258ENST00000506573 HLFQ16534 295 aa20.26■□□□□ 0.83
DDR1-258ENST00000506573 DLEC1Q9Y238 1755 aa20.26■□□□□ 0.83
DDR1-258ENST00000506573 CHL1O00533 1208 aa20.25■□□□□ 0.83
DDR1-258ENST00000506573 C21orf2O43822 256 aa20.25■□□□□ 0.83
DDR1-258ENST00000506573 RASSF7Q02833 373 aa20.24■□□□□ 0.83
DDR1-258ENST00000506573 ZBTB3Q9H5J0 574 aa20.24■□□□□ 0.83
DDR1-258ENST00000506573 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
DDR1-258ENST00000506573 ALDH1B1P30837 517 aa20.23■□□□□ 0.83
DDR1-258ENST00000506573 PRPF40BQ6NWY9 871 aaKnown RBP20.23■□□□□ 0.83
DDR1-258ENST00000506573 TTLL7Q6ZT98 887 aa20.23■□□□□ 0.83
DDR1-258ENST00000506573 PPP1R42Q7Z4L9 355 aa20.23■□□□□ 0.83
DDR1-258ENST00000506573 ZNF219Q9P2Y4 722 aaPredicted RBP20.23■□□□□ 0.83
DDR1-258ENST00000506573 ZNF316A6NFI3 1004 aaPredicted RBP20.22■□□□□ 0.83
DDR1-258ENST00000506573 KIF3CO14782 793 aa20.22■□□□□ 0.83
DDR1-258ENST00000506573 TOMM70O94826 608 aa20.22■□□□□ 0.83
DDR1-258ENST00000506573 HOXB7P09629 217 aa20.22■□□□□ 0.83
DDR1-258ENST00000506573 PARP10Q53GL7 1025 aa20.22■□□□□ 0.83
DDR1-258ENST00000506573 HSP90AB3PQ58FF7 597 aa20.22■□□□□ 0.83
DDR1-258ENST00000506573 GIGYF2Q6Y7W6 1299 aaKnown RBP20.22■□□□□ 0.83
DDR1-258ENST00000506573 CFAP44Q96MT7 982 aa20.22■□□□□ 0.83
DDR1-258ENST00000506573 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
DDR1-258ENST00000506573 KLRG2A4D1S0 409 aaPredicted RBP20.21■□□□□ 0.83
DDR1-258ENST00000506573 ANP32CO43423 234 aa20.21■□□□□ 0.83
DDR1-258ENST00000506573 TAOK3Q9H2K8 898 aa20.21■□□□□ 0.83
DDR1-258ENST00000506573 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
DDR1-258ENST00000506573 DPY19L2Q6NUT2 758 aa20.2■□□□□ 0.82
DDR1-258ENST00000506573 ANKRD31Q8N7Z5 1873 aa20.2■□□□□ 0.82
DDR1-258ENST00000506573 APAF1O14727 1248 aa20.19■□□□□ 0.82
DDR1-258ENST00000506573 GPTP24298 496 aa20.19■□□□□ 0.82
DDR1-258ENST00000506573 GNAI1P63096 354 aa20.19■□□□□ 0.82
DDR1-258ENST00000506573 CCDC93Q567U6 631 aa20.19■□□□□ 0.82
DDR1-258ENST00000506573 HDGFL1Q5TGJ6 251 aa20.19■□□□□ 0.82
DDR1-258ENST00000506573 NECTIN2Q92692 538 aa20.19■□□□□ 0.82
DDR1-258ENST00000506573 RPGRQ92834 1020 aaKnown RBP20.19■□□□□ 0.82
DDR1-258ENST00000506573 NMRK2Q9NPI5 230 aa20.19■□□□□ 0.82
DDR1-258ENST00000506573 DDX21Q9NR30 783 aaKnown RBP eCLIP20.19■□□□□ 0.82
DDR1-258ENST00000506573 LTBP3Q9NS15 1303 aa20.19■□□□□ 0.82
DDR1-258ENST00000506573 NFKBIEO00221 500 aa20.18■□□□□ 0.82
DDR1-258ENST00000506573 ERFEQ4G0M1 354 aa20.18■□□□□ 0.82
DDR1-258ENST00000506573 ZNF34Q8IZ26 560 aa20.18■□□□□ 0.82
DDR1-258ENST00000506573 RTKN2Q8IZC4 609 aa20.18■□□□□ 0.82
DDR1-258ENST00000506573 IFT57Q9NWB7 429 aa20.18■□□□□ 0.82
DDR1-258ENST00000506573 DBF4Q9UBU7 674 aaPredicted RBP20.18■□□□□ 0.82
DDR1-258ENST00000506573 GLTPD2A6NH11 291 aa20.17■□□□□ 0.82
DDR1-258ENST00000506573 HSPA6P17066 643 aa20.17■□□□□ 0.82
DDR1-258ENST00000506573 AIMP1Q12904 312 aaKnown RBP20.17■□□□□ 0.82
DDR1-258ENST00000506573 PDIA6Q15084 440 aa20.17■□□□□ 0.82
DDR1-258ENST00000506573 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
DDR1-258ENST00000506573 TMX4Q9H1E5 349 aaPredicted RBP20.17■□□□□ 0.82
DDR1-258ENST00000506573 RNF123Q5XPI4 1314 aa20.17■□□□□ 0.82
DDR1-258ENST00000506573 NUTM1Q86Y26 1132 aa20.16■□□□□ 0.82
DDR1-258ENST00000506573 XAGE3Q8WTP9 111 aa20.16■□□□□ 0.82
DDR1-258ENST00000506573 UTP14AQ9BVJ6 771 aaKnown RBP20.16■□□□□ 0.82
DDR1-258ENST00000506573 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
DDR1-258ENST00000506573 GRIPAP1Q4V328 841 aa20.15■□□□□ 0.82
DDR1-258ENST00000506573 SUSD4Q5VX71 490 aa20.15■□□□□ 0.82
DDR1-258ENST00000506573 RBM46Q8TBY0 533 aaKnown RBP20.15■□□□□ 0.82
DDR1-258ENST00000506573 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
DDR1-258ENST00000506573 NLRP3Q96P20 1036 aa20.15■□□□□ 0.82
DDR1-258ENST00000506573 RRAGCQ9HB90 399 aa20.15■□□□□ 0.82
DDR1-258ENST00000506573 HYPKQ9NX55 129 aa20.15■□□□□ 0.82
DDR1-258ENST00000506573 RIC1Q4ADV7 1423 aa20.14■□□□□ 0.81
DDR1-258ENST00000506573 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.81
DDR1-258ENST00000506573 ANXA1P04083 346 aa20.14■□□□□ 0.81
DDR1-258ENST00000506573 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
DDR1-258ENST00000506573 PROSER3Q2NL68 480 aa20.14■□□□□ 0.81
DDR1-258ENST00000506573 CRY2Q49AN0 593 aa20.14■□□□□ 0.81
DDR1-258ENST00000506573 DUSP27Q5VZP5 1158 aa20.14■□□□□ 0.81
DDR1-258ENST00000506573 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.81
DDR1-258ENST00000506573 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms