RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 VSIG8P0DPA2 414 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 NOS2P35228 1153 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 PTGIRP43119 386 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 CENPCQ03188 943 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 PDE3BQ13370 1112 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 POTEAQ6S8J7 498 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 GPR161Q8N6U8 529 aaKnown RBP5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 NGLY1Q96IV0 654 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 QTRT2Q9H974 415 aaKnown RBP5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 CCDC87Q9NVE4 849 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 CABP1Q9NZU7 370 aa5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 IQSEC3Q9UPP2 1182 aaPredicted RBP5.15□□□□□ -1.59
TRAPPC11-205ENST00000506426 MEN1O00255 615 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 EML1O00423 815 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 TREHO43280 583 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 FZD6O60353 706 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 PPFIA3O75145 1194 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 P4HBP07237 508 aaKnown RBP5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 GTF2E1P29083 439 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 HIRAP54198 1017 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 RASSF7Q02833 373 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 CBLBQ13191 982 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 C11orf91Q3C1V1 193 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 Q6ZVU0 165 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 ALDH16A1Q8IZ83 802 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 FHDC1Q9C0D6 1143 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 LRFN2Q9ULH4 789 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 HCN4Q9Y3Q4 1203 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 USP3Q9Y6I4 520 aa5.14□□□□□ -1.59
TRAPPC11-205ENST00000506426 MAN1A2O60476 641 aa5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 GDF11O95390 407 aa5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 ZIC2O95409 532 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 ITGAEP38570 1179 aa5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 FMR1Q06787 632 aaKnown RBP eCLIP5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 SCARF1Q14162 830 aa5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 RTN1Q16799 776 aa5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 PPARGC1BQ86YN6 1023 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 TMEM151AQ8N4L1 468 aa5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 KDF1Q8NAX2 398 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 L3MBTL2Q969R5 705 aa5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 ZSCAN10Q96SZ4 725 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 NIFKQ9BYG3 293 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-205ENST00000506426 ZBTB39O15060 712 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 MZF1P28698 734 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 USP5P45974 858 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 MAPK8P45983 427 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 RELBQ01201 579 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 ATP2B2Q01814 1243 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 XPCQ01831 940 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 EHHADHQ08426 723 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 DGKZQ13574 1117 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 DSC3Q14574 896 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 C1orf53Q5VUE5 145 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 TMEM214Q6NUQ4 689 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 ZDHHC1Q8WTX9 485 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 ITPKCQ96DU7 683 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 IFT43Q96FT9 208 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 AGBL1Q96MI9 1066 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 FAM129BQ96TA1 746 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 PHACTR1Q9C0D0 580 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 USP35Q9P2H5 1018 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 ADAMTS8Q9UP79 889 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 SHROOM4Q9ULL8 1493 aa5.12□□□□□ -1.59
TRAPPC11-205ENST00000506426 PRPF40AO75400 957 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 RECKO95980 971 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 LDHBP07195 334 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 PCSK2P16519 638 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 TSNAXIP1Q2TAA8 658 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 GNASQ5JWF2 1037 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 SH3PXD2AQ5TCZ1 1133 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 RHBDD1Q8TEB9 315 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 ALKBH8Q96BT7 664 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 CNTNAP3BQ96NU0 1288 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 CNTNAP3Q9BZ76 1288 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 ZNF395Q9H8N7 513 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 POLIQ9UNA4 740 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 PARP3Q9Y6F1 533 aa5.11□□□□□ -1.59
TRAPPC11-205ENST00000506426 DNM1Q05193 864 aaKnown RBP5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 SLC27A3Q5K4L6 730 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 ATCAYQ86WG3 371 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 ETFBKMTQ8IXQ9 262 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 ZNF295-AS1Q8N0V1 137 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 TTC16Q8NEE8 873 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 WHAMMQ8TF30 809 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 EDEM1Q92611 657 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 BACH2Q9BYV9 841 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 NIF3L1Q9GZT8 377 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 MRS2Q9HD23 443 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 FAM13BQ9NYF5 915 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 KLK14Q9P0G3 267 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 DNMT3LQ9UJW3 386 aa5.1□□□□□ -1.59
TRAPPC11-205ENST00000506426 GPR182O15218 404 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 IGHA2P01877 340 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 PDGFAP04085 211 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 RPLP1P05386 114 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 BMP2P12643 396 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 GPC1P35052 558 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 ZAP70P43403 619 aa5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 MRPL58Q14197 206 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-205ENST00000506426 HIF1AQ16665 826 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms