RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 NECTIN2Q92692 538 aa21.58■■□□□ 1.05
SNCA-209ENST00000506244 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
SNCA-209ENST00000506244 ATP10DQ9P241 1426 aa21.57■■□□□ 1.04
SNCA-209ENST00000506244 NPHP1O15259 732 aa21.57■■□□□ 1.04
SNCA-209ENST00000506244 PDIA6Q15084 440 aa21.57■■□□□ 1.04
SNCA-209ENST00000506244 GPR162Q16538 588 aa21.57■■□□□ 1.04
SNCA-209ENST00000506244 TSR2Q969E8 191 aaKnown RBP21.57■■□□□ 1.04
SNCA-209ENST00000506244 KIAA1551Q9HCM1 1747 aa21.57■■□□□ 1.04
SNCA-209ENST00000506244 PELP1Q8IZL8 1130 aaKnown RBP21.56■■□□□ 1.04
SNCA-209ENST00000506244 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
SNCA-209ENST00000506244 CHPF2Q9P2E5 772 aa21.56■■□□□ 1.04
SNCA-209ENST00000506244 FANCIQ9NVI1 1328 aa21.55■■□□□ 1.04
SNCA-209ENST00000506244 PROSER3Q2NL68 480 aa21.55■■□□□ 1.04
SNCA-209ENST00000506244 TTLL7Q6ZT98 887 aa21.55■■□□□ 1.04
SNCA-209ENST00000506244 LRP10Q7Z4F1 713 aa21.55■■□□□ 1.04
SNCA-209ENST00000506244 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
SNCA-209ENST00000506244 HYPKQ9NX55 129 aa21.55■■□□□ 1.04
SNCA-209ENST00000506244 ST5P78524 1137 aa21.54■■□□□ 1.04
SNCA-209ENST00000506244 ZBTB3Q9H5J0 574 aa21.54■■□□□ 1.04
SNCA-209ENST00000506244 NIP7Q9Y221 180 aaKnown RBP eCLIP21.54■■□□□ 1.04
SNCA-209ENST00000506244 NUP98P52948 1817 aa21.54■■□□□ 1.04
SNCA-209ENST00000506244 ELL2O00472 640 aaPredicted RBP21.53■■□□□ 1.04
SNCA-209ENST00000506244 ANXA1P04083 346 aa21.53■■□□□ 1.04
SNCA-209ENST00000506244 CCDC30Q5VVM6 783 aa21.53■■□□□ 1.04
SNCA-209ENST00000506244 NBPF5PQ86XG9 351 aaPredicted RBP21.53■■□□□ 1.04
SNCA-209ENST00000506244 C8orf58Q8NAV2 365 aa21.53■■□□□ 1.04
SNCA-209ENST00000506244 N4BP2Q86UW6 1770 aaPredicted RBP21.53■■□□□ 1.04
SNCA-209ENST00000506244 IBTKQ9P2D0 1353 aaPredicted RBP21.52■■□□□ 1.04
SNCA-209ENST00000506244 GRIN3BO60391 1043 aa21.52■■□□□ 1.04
SNCA-209ENST00000506244 GOLGA2Q08379 1002 aa21.52■■□□□ 1.04
SNCA-209ENST00000506244 HLFQ16534 295 aa21.52■■□□□ 1.04
SNCA-209ENST00000506244 GIGYF2Q6Y7W6 1299 aaKnown RBP21.52■■□□□ 1.04
SNCA-209ENST00000506244 MIER1Q8N108 512 aa21.52■■□□□ 1.04
SNCA-209ENST00000506244 XAGE3Q8WTP9 111 aa21.52■■□□□ 1.04
SNCA-209ENST00000506244 ZNF521Q96K83 1311 aa21.52■■□□□ 1.03
SNCA-209ENST00000506244 TWISTNBQ3B726 338 aaPredicted RBP21.51■■□□□ 1.03
SNCA-209ENST00000506244 HSP90AB3PQ58FF7 597 aa21.51■■□□□ 1.03
SNCA-209ENST00000506244 PRR5LQ6MZQ0 368 aa21.51■■□□□ 1.03
SNCA-209ENST00000506244 COPS6Q7L5N1 327 aa21.51■■□□□ 1.03
SNCA-209ENST00000506244 PDZRN3Q9UPQ7 1066 aa21.51■■□□□ 1.03
SNCA-209ENST00000506244 AIMP1Q12904 312 aaKnown RBP21.5■■□□□ 1.03
SNCA-209ENST00000506244 STK31Q9BXU1 1019 aa21.5■■□□□ 1.03
SNCA-209ENST00000506244 NYXQ9GZU5 481 aa21.5■■□□□ 1.03
SNCA-209ENST00000506244 ANKRD36CQ5JPF3 1778 aa21.5■■□□□ 1.03
SNCA-209ENST00000506244 BRCA1P38398 1863 aaKnown RBP21.49■■□□□ 1.03
SNCA-209ENST00000506244 DLEC1Q9Y238 1755 aa21.49■■□□□ 1.03
SNCA-209ENST00000506244 A0A0G2JLW4 131 aa21.49■■□□□ 1.03
SNCA-209ENST00000506244 DPEP1P16444 411 aa21.49■■□□□ 1.03
SNCA-209ENST00000506244 PDE6BP35913 854 aa21.49■■□□□ 1.03
SNCA-209ENST00000506244 TPTE2Q6XPS3 522 aa21.49■■□□□ 1.03
SNCA-209ENST00000506244 BRIP1Q9BX63 1249 aa21.49■■□□□ 1.03
SNCA-209ENST00000506244 PARP10Q53GL7 1025 aa21.48■■□□□ 1.03
SNCA-209ENST00000506244 TSPYL6Q8N831 410 aa21.48■■□□□ 1.03
SNCA-209ENST00000506244 YBX3P16989 372 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNCA-209ENST00000506244 PLBD2Q8NHP8 589 aa21.47■■□□□ 1.03
SNCA-209ENST00000506244 PIM2Q9P1W9 311 aa21.47■■□□□ 1.03
SNCA-209ENST00000506244 ANKRD31Q8N7Z5 1873 aa21.47■■□□□ 1.03
SNCA-209ENST00000506244 E9PSI1 815 aa21.46■■□□□ 1.03
SNCA-209ENST00000506244 H0YIN7 160 aa21.46■■□□□ 1.03
SNCA-209ENST00000506244 GTF2E1P29083 439 aaPredicted RBP21.46■■□□□ 1.03
SNCA-209ENST00000506244 DDX58O95786 925 aaKnown RBP21.45■■□□□ 1.02
SNCA-209ENST00000506244 GPTP24298 496 aa21.45■■□□□ 1.02
SNCA-209ENST00000506244 ANKRD13DQ6ZTN6 518 aa21.45■■□□□ 1.02
SNCA-209ENST00000506244 PPP1R42Q7Z4L9 355 aa21.45■■□□□ 1.02
SNCA-209ENST00000506244 ZNF34Q8IZ26 560 aa21.45■■□□□ 1.02
SNCA-209ENST00000506244 RNF123Q5XPI4 1314 aa21.45■■□□□ 1.02
SNCA-209ENST00000506244 ARFGEF2Q9Y6D5 1785 aa21.44■■□□□ 1.02
SNCA-209ENST00000506244 CHRNA5P30532 468 aa21.44■■□□□ 1.02
SNCA-209ENST00000506244 EXOSC9Q06265 439 aaKnown RBP21.44■■□□□ 1.02
SNCA-209ENST00000506244 DALRD3Q5D0E6 543 aaKnown RBP21.44■■□□□ 1.02
SNCA-209ENST00000506244 C2CD5Q86YS7 1000 aa21.44■■□□□ 1.02
SNCA-209ENST00000506244 SPINK5Q9NQ38 1064 aaPredicted RBP21.44■■□□□ 1.02
SNCA-209ENST00000506244 BCS1LQ9Y276 419 aa21.44■■□□□ 1.02
SNCA-209ENST00000506244 UBN2Q6ZU65 1347 aa21.44■■□□□ 1.02
SNCA-209ENST00000506244 RIC1Q4ADV7 1423 aa21.44■■□□□ 1.02
SNCA-209ENST00000506244 ARFGEF1Q9Y6D6 1849 aa21.43■■□□□ 1.02
SNCA-209ENST00000506244 CHD4Q14839 1912 aa21.43■■□□□ 1.02
SNCA-209ENST00000506244 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
SNCA-209ENST00000506244 WWC3Q9ULE0 1092 aa21.43■■□□□ 1.02
SNCA-209ENST00000506244 COL11A2P13942 1736 aaPredicted RBP21.43■■□□□ 1.02
SNCA-209ENST00000506244 KCNA3P22001 575 aa21.42■■□□□ 1.02
SNCA-209ENST00000506244 TCIRG1Q13488 830 aa21.42■■□□□ 1.02
SNCA-209ENST00000506244 GOLGB1Q14789 3259 aaKnown RBP21.42■■□□□ 1.02
SNCA-209ENST00000506244 CACNA1FO60840 1977 aa21.41■■□□□ 1.02
SNCA-209ENST00000506244 RIC3Q7Z5B4 369 aa21.41■■□□□ 1.02
SNCA-209ENST00000506244 CCDC24Q8N4L8 307 aa21.41■■□□□ 1.02
SNCA-209ENST00000506244 UTRNP46939 3433 aa21.41■■□□□ 1.02
SNCA-209ENST00000506244 NTSR2O95665 410 aa21.4■■□□□ 1.02
SNCA-209ENST00000506244 UTP14AQ9BVJ6 771 aaKnown RBP21.4■■□□□ 1.02
SNCA-209ENST00000506244 PHAXQ9H814 394 aaKnown RBP21.4■■□□□ 1.02
SNCA-209ENST00000506244 ABCC12Q96J65 1359 aa21.39■■□□□ 1.02
SNCA-209ENST00000506244 VAMP4O75379 141 aa21.39■■□□□ 1.01
SNCA-209ENST00000506244 SUSD4Q5VX71 490 aa21.39■■□□□ 1.01
SNCA-209ENST00000506244 TTLL6Q8N841 843 aa21.39■■□□□ 1.01
SNCA-209ENST00000506244 STYK1Q6J9G0 422 aa21.38■■□□□ 1.01
SNCA-209ENST00000506244 NLRP10Q86W26 655 aa21.38■■□□□ 1.01
SNCA-209ENST00000506244 NUTM1Q86Y26 1132 aa21.38■■□□□ 1.01
SNCA-209ENST00000506244 MASTLQ96GX5 879 aa21.38■■□□□ 1.01
SNCA-209ENST00000506244 TNRC6CQ9HCJ0 1690 aaKnown RBP21.37■■□□□ 1.01
SNCA-209ENST00000506244 KLRG2A4D1S0 409 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms