RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 RFC4P35249 363 aa12.61□□□□□ -0.39
TRIM6-208ENST00000506134 NPM2Q86SE8 214 aaKnown RBP12.61□□□□□ -0.39
TRIM6-208ENST00000506134 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
TRIM6-208ENST00000506134 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
TRIM6-208ENST00000506134 FLAD1Q8NFF5 587 aa12.61□□□□□ -0.39
TRIM6-208ENST00000506134 ZNF428Q96B54 188 aa12.61□□□□□ -0.39
TRIM6-208ENST00000506134 SRP68Q9UHB9 627 aaKnown RBP12.61□□□□□ -0.39
TRIM6-208ENST00000506134 COL15A1P39059 1388 aa12.61□□□□□ -0.39
TRIM6-208ENST00000506134 BCAR3O75815 825 aa12.6□□□□□ -0.39
TRIM6-208ENST00000506134 ALDH1L2Q3SY69 923 aa12.6□□□□□ -0.39
TRIM6-208ENST00000506134 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
TRIM6-208ENST00000506134 USPL1Q5W0Q7 1092 aa12.59□□□□□ -0.39
TRIM6-208ENST00000506134 SMC4Q9NTJ3 1288 aa12.59□□□□□ -0.39
TRIM6-208ENST00000506134 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
TRIM6-208ENST00000506134 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
TRIM6-208ENST00000506134 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
TRIM6-208ENST00000506134 ZPR1O75312 459 aa12.58□□□□□ -0.4
TRIM6-208ENST00000506134 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
TRIM6-208ENST00000506134 HLFQ16534 295 aa12.58□□□□□ -0.4
TRIM6-208ENST00000506134 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
TRIM6-208ENST00000506134 ZBTB3Q9H5J0 574 aa12.58□□□□□ -0.4
TRIM6-208ENST00000506134 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
TRIM6-208ENST00000506134 FLIIQ13045 1269 aa12.57□□□□□ -0.4
TRIM6-208ENST00000506134 KIF6Q6ZMV9 814 aa12.57□□□□□ -0.4
TRIM6-208ENST00000506134 RCAN3Q9UKA8 241 aa12.57□□□□□ -0.4
TRIM6-208ENST00000506134 NOB1Q9ULX3 412 aaKnown RBP12.57□□□□□ -0.4
TRIM6-208ENST00000506134 MAP3K15Q6ZN16 1313 aa12.57□□□□□ -0.4
TRIM6-208ENST00000506134 USP42Q9H9J4 1324 aaKnown RBP12.57□□□□□ -0.4
TRIM6-208ENST00000506134 ERVV-1B6SEH8 477 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 GYS1P13807 737 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
TRIM6-208ENST00000506134 FKBP8Q14318 412 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 CACNA1FO60840 1977 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 QSER1Q2KHR3 1735 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 ZBTB7AO95365 584 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 FKBP5Q13451 457 aaPredicted RBP12.56□□□□□ -0.4
TRIM6-208ENST00000506134 MSL1Q68DK7 614 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
TRIM6-208ENST00000506134 F6X3S4 739 aa12.55□□□□□ -0.4
TRIM6-208ENST00000506134 DDX58O95786 925 aaKnown RBP12.55□□□□□ -0.4
TRIM6-208ENST00000506134 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
TRIM6-208ENST00000506134 BICDL1Q6ZP65 573 aa12.55□□□□□ -0.4
TRIM6-208ENST00000506134 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
TRIM6-208ENST00000506134 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
TRIM6-208ENST00000506134 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
TRIM6-208ENST00000506134 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
TRIM6-208ENST00000506134 TM4SF1P30408 202 aa12.54□□□□□ -0.4
TRIM6-208ENST00000506134 TCIRG1Q13488 830 aa12.54□□□□□ -0.4
TRIM6-208ENST00000506134 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
TRIM6-208ENST00000506134 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
TRIM6-208ENST00000506134 NLGN1Q8N2Q7 840 aa12.54□□□□□ -0.4
TRIM6-208ENST00000506134 ADCY9O60503 1353 aa12.54□□□□□ -0.4
TRIM6-208ENST00000506134 NFIXQ14938 502 aa12.53□□□□□ -0.4
TRIM6-208ENST00000506134 METTL22Q9BUU2 404 aaPredicted RBP12.53□□□□□ -0.4
TRIM6-208ENST00000506134 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
TRIM6-208ENST00000506134 CASZ1Q86V15 1759 aa12.52□□□□□ -0.4
TRIM6-208ENST00000506134 PTPRCP08575 1304 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 GPTP24298 496 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 ZNF34Q8IZ26 560 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 MYD88Q99836 296 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 MTFR1LQ9H019 292 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRIM6-208ENST00000506134 ZNF652Q9Y2D9 606 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 NUP98P52948 1817 aa12.52□□□□□ -0.41
TRIM6-208ENST00000506134 RGL2O15211 777 aa12.51□□□□□ -0.41
TRIM6-208ENST00000506134 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
TRIM6-208ENST00000506134 PLIN1O60240 522 aa12.51□□□□□ -0.41
TRIM6-208ENST00000506134 MMP10P09238 476 aa12.51□□□□□ -0.41
TRIM6-208ENST00000506134 ZKSCAN2Q63HK3 967 aa12.51□□□□□ -0.41
TRIM6-208ENST00000506134 SLC4A10Q6U841 1118 aa12.51□□□□□ -0.41
TRIM6-208ENST00000506134 ARHGAP45Q92619 1136 aa12.51□□□□□ -0.41
TRIM6-208ENST00000506134 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
TRIM6-208ENST00000506134 KIF16BQ96L93 1317 aa12.5□□□□□ -0.41
TRIM6-208ENST00000506134 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
TRIM6-208ENST00000506134 DDR1Q08345 913 aa12.5□□□□□ -0.41
TRIM6-208ENST00000506134 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
TRIM6-208ENST00000506134 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
TRIM6-208ENST00000506134 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
TRIM6-208ENST00000506134 ISCA1Q9BUE6 129 aa12.5□□□□□ -0.41
TRIM6-208ENST00000506134 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
TRIM6-208ENST00000506134 UBN2Q6ZU65 1347 aa12.49□□□□□ -0.41
TRIM6-208ENST00000506134 IGKV5-2P06315 115 aa12.49□□□□□ -0.41
TRIM6-208ENST00000506134 TRIM27P14373 513 aa12.49□□□□□ -0.41
TRIM6-208ENST00000506134 CWF19L2Q2TBE0 894 aaKnown RBP12.49□□□□□ -0.41
TRIM6-208ENST00000506134 BEND3Q5T5X7 828 aa12.49□□□□□ -0.41
TRIM6-208ENST00000506134 SUSD4Q5VX71 490 aa12.49□□□□□ -0.41
TRIM6-208ENST00000506134 NLRP10Q86W26 655 aa12.49□□□□□ -0.41
TRIM6-208ENST00000506134 CLUAP1Q96AJ1 413 aa12.49□□□□□ -0.41
TRIM6-208ENST00000506134 SCN7AQ01118 1682 aa12.49□□□□□ -0.41
TRIM6-208ENST00000506134 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
TRIM6-208ENST00000506134 POLRMTO00411 1230 aaKnown RBP12.48□□□□□ -0.41
TRIM6-208ENST00000506134 SERPINB2P05120 415 aa12.48□□□□□ -0.41
TRIM6-208ENST00000506134 PTGER2P43116 358 aa12.48□□□□□ -0.41
TRIM6-208ENST00000506134 NEXNQ0ZGT2 675 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms