RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 CLEC4GQ6UXB4 293 aa17.1■□□□□ 0.33
ITGA3-206ENST00000505612 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
ITGA3-206ENST00000505612 TM4SF1P30408 202 aa17.09■□□□□ 0.33
ITGA3-206ENST00000505612 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
ITGA3-206ENST00000505612 KLHL34Q8N239 644 aa17.09■□□□□ 0.33
ITGA3-206ENST00000505612 SIPA1L3O60292 1781 aaPredicted RBP17.09■□□□□ 0.33
ITGA3-206ENST00000505612 UBR3Q6ZT12 1888 aa17.08■□□□□ 0.33
ITGA3-206ENST00000505612 UBR2Q8IWV8 1755 aa17.08■□□□□ 0.33
ITGA3-206ENST00000505612 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
ITGA3-206ENST00000505612 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
ITGA3-206ENST00000505612 ATF7IPQ6VMQ6 1270 aa17.08■□□□□ 0.32
ITGA3-206ENST00000505612 TBC1D2BQ9UPU7 963 aa17.08■□□□□ 0.32
ITGA3-206ENST00000505612 TGFB2P61812 414 aa17.07■□□□□ 0.32
ITGA3-206ENST00000505612 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
ITGA3-206ENST00000505612 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
ITGA3-206ENST00000505612 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
ITGA3-206ENST00000505612 TJP1Q07157 1748 aa17.07■□□□□ 0.32
ITGA3-206ENST00000505612 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
ITGA3-206ENST00000505612 ERVV-1B6SEH8 477 aa17.06■□□□□ 0.32
ITGA3-206ENST00000505612 EIF2S2P20042 333 aaKnown RBP17.06■□□□□ 0.32
ITGA3-206ENST00000505612 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
ITGA3-206ENST00000505612 KIF6Q6ZMV9 814 aa17.06■□□□□ 0.32
ITGA3-206ENST00000505612 MRPL50Q8N5N7 158 aaKnown RBP17.06■□□□□ 0.32
ITGA3-206ENST00000505612 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
ITGA3-206ENST00000505612 TSPYL6Q8N831 410 aa17.06■□□□□ 0.32
ITGA3-206ENST00000505612 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
ITGA3-206ENST00000505612 CAMTA2O94983 1202 aa17.04■□□□□ 0.32
ITGA3-206ENST00000505612 TRIM27P14373 513 aa17.04■□□□□ 0.32
ITGA3-206ENST00000505612 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
ITGA3-206ENST00000505612 NFIXQ14938 502 aa17.04■□□□□ 0.32
ITGA3-206ENST00000505612 PANK1Q8TE04 598 aa17.04■□□□□ 0.32
ITGA3-206ENST00000505612 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
ITGA3-206ENST00000505612 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
ITGA3-206ENST00000505612 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
ITGA3-206ENST00000505612 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
ITGA3-206ENST00000505612 MYH14Q7Z406 1995 aaKnown RBP17.03■□□□□ 0.32
ITGA3-206ENST00000505612 POLRMTO00411 1230 aaKnown RBP17.03■□□□□ 0.32
ITGA3-206ENST00000505612 HDGFL1Q5TGJ6 251 aa17.03■□□□□ 0.32
ITGA3-206ENST00000505612 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
ITGA3-206ENST00000505612 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
ITGA3-206ENST00000505612 BCL2L13Q9BXK5 485 aa17.03■□□□□ 0.32
ITGA3-206ENST00000505612 BCL2L12Q9HB09 334 aa17.03■□□□□ 0.32
ITGA3-206ENST00000505612 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
ITGA3-206ENST00000505612 PDZRN3Q9UPQ7 1066 aa17.03■□□□□ 0.32
ITGA3-206ENST00000505612 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.32
ITGA3-206ENST00000505612 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
ITGA3-206ENST00000505612 SERPINB2P05120 415 aa17.02■□□□□ 0.32
ITGA3-206ENST00000505612 RLBP1P12271 317 aa17.02■□□□□ 0.32
ITGA3-206ENST00000505612 MYL6BP14649 208 aa17.02■□□□□ 0.32
ITGA3-206ENST00000505612 GPR162Q16538 588 aa17.02■□□□□ 0.32
ITGA3-206ENST00000505612 FTSJ3Q8IY81 847 aaKnown RBP17.02■□□□□ 0.32
ITGA3-206ENST00000505612 API5Q9BZZ5 524 aaKnown RBP17.02■□□□□ 0.32
ITGA3-206ENST00000505612 HYPKQ9NX55 129 aa17.02■□□□□ 0.32
ITGA3-206ENST00000505612 DDX19BQ9UMR2 479 aa17.02■□□□□ 0.32
ITGA3-206ENST00000505612 TUBGCP6Q96RT7 1819 aa17.02■□□□□ 0.31
ITGA3-206ENST00000505612 NPHP1O15259 732 aa17.01■□□□□ 0.31
ITGA3-206ENST00000505612 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
ITGA3-206ENST00000505612 DDR1Q08345 913 aa17.01■□□□□ 0.31
ITGA3-206ENST00000505612 COG6Q9Y2V7 657 aa17.01■□□□□ 0.31
ITGA3-206ENST00000505612 COL24A1Q17RW2 1714 aa17.01■□□□□ 0.31
ITGA3-206ENST00000505612 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
ITGA3-206ENST00000505612 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
ITGA3-206ENST00000505612 TPTE2Q6XPS3 522 aa17■□□□□ 0.31
ITGA3-206ENST00000505612 BICDL1Q6ZP65 573 aa17■□□□□ 0.31
ITGA3-206ENST00000505612 CARMIL3Q8ND23 1372 aa17■□□□□ 0.31
ITGA3-206ENST00000505612 PTPRCP08575 1304 aa16.99■□□□□ 0.31
ITGA3-206ENST00000505612 CACNA1FO60840 1977 aa16.99■□□□□ 0.31
ITGA3-206ENST00000505612 PDIA6Q15084 440 aa16.99■□□□□ 0.31
ITGA3-206ENST00000505612 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
ITGA3-206ENST00000505612 TBC1D9BQ66K14 1250 aa16.99■□□□□ 0.31
ITGA3-206ENST00000505612 KDM3BQ7LBC6 1761 aa16.99■□□□□ 0.31
ITGA3-206ENST00000505612 ST5P78524 1137 aa16.98■□□□□ 0.31
ITGA3-206ENST00000505612 NLGN2Q8NFZ4 835 aa16.98■□□□□ 0.31
ITGA3-206ENST00000505612 BRIP1Q9BX63 1249 aa16.98■□□□□ 0.31
ITGA3-206ENST00000505612 NYXQ9GZU5 481 aa16.98■□□□□ 0.31
ITGA3-206ENST00000505612 NIP7Q9Y221 180 aaKnown RBP eCLIP16.98■□□□□ 0.31
ITGA3-206ENST00000505612 ABCC4O15439 1325 aa16.97■□□□□ 0.31
ITGA3-206ENST00000505612 PDE6BP35913 854 aa16.97■□□□□ 0.31
ITGA3-206ENST00000505612 KRT24Q2M2I5 525 aa16.97■□□□□ 0.31
ITGA3-206ENST00000505612 COPS6Q7L5N1 327 aa16.97■□□□□ 0.31
ITGA3-206ENST00000505612 NBPF5PQ86XG9 351 aaPredicted RBP16.97■□□□□ 0.31
ITGA3-206ENST00000505612 CNBD1Q8NA66 436 aa16.97■□□□□ 0.31
ITGA3-206ENST00000505612 NECTIN2Q92692 538 aa16.97■□□□□ 0.31
ITGA3-206ENST00000505612 STK31Q9BXU1 1019 aa16.97■□□□□ 0.31
ITGA3-206ENST00000505612 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
ITGA3-206ENST00000505612 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.31
ITGA3-206ENST00000505612 GIGYF2Q6Y7W6 1299 aaKnown RBP16.96■□□□□ 0.31
ITGA3-206ENST00000505612 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
ITGA3-206ENST00000505612 PIM2Q9P1W9 311 aa16.96■□□□□ 0.31
ITGA3-206ENST00000505612 CHPF2Q9P2E5 772 aa16.96■□□□□ 0.31
ITGA3-206ENST00000505612 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.3
ITGA3-206ENST00000505612 H0YIN7 160 aa16.95■□□□□ 0.3
ITGA3-206ENST00000505612 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
ITGA3-206ENST00000505612 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
ITGA3-206ENST00000505612 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
ITGA3-206ENST00000505612 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
ITGA3-206ENST00000505612 TNNQ9UQP3 1299 aa16.95■□□□□ 0.3
ITGA3-206ENST00000505612 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
ITGA3-206ENST00000505612 TCERG1O14776 1098 aaKnown RBP16.94■□□□□ 0.3
ITGA3-206ENST00000505612 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms