RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 TNFRSF25Q93038 417 aa7.98□□□□□ -1.13
SMN2-205ENST00000505346 SLC4A9Q96Q91 983 aa7.98□□□□□ -1.13
SMN2-205ENST00000505346 ALBP02768 609 aa7.97□□□□□ -1.13
SMN2-205ENST00000505346 MTFR1Q15390 333 aa7.97□□□□□ -1.13
SMN2-205ENST00000505346 C8orf86Q6ZUL3 223 aa7.97□□□□□ -1.13
SMN2-205ENST00000505346 ZNF295-AS1Q8N0V1 137 aa7.97□□□□□ -1.13
SMN2-205ENST00000505346 IQSEC3Q9UPP2 1182 aaPredicted RBP7.97□□□□□ -1.13
SMN2-205ENST00000505346 STARD13Q9Y3M8 1113 aa7.97□□□□□ -1.13
SMN2-205ENST00000505346 NID1P14543 1247 aa7.96□□□□□ -1.14
SMN2-205ENST00000505346 ADGRE1Q14246 886 aa7.96□□□□□ -1.14
SMN2-205ENST00000505346 MAP7D1Q3KQU3 841 aa7.96□□□□□ -1.14
SMN2-205ENST00000505346 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.14
SMN2-205ENST00000505346 CHIC2Q9UKJ5 165 aa7.96□□□□□ -1.14
SMN2-205ENST00000505346 PARP3Q9Y6F1 533 aa7.96□□□□□ -1.14
SMN2-205ENST00000505346 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 LILRB5O75023 590 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 ELNP15502 786 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 ADH7P40394 386 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 MBTPS1Q14703 1052 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 TPRNQ4KMQ1 711 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 LRRC69Q6ZNQ3 347 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 TP53INP1Q96A56 240 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 PRM3Q9NNZ6 103 aa7.95□□□□□ -1.14
SMN2-205ENST00000505346 LENG1Q96BZ8 264 aaPredicted RBP7.94□□□□□ -1.14
SMN2-205ENST00000505346 SNRKQ9NRH2 765 aa7.94□□□□□ -1.14
SMN2-205ENST00000505346 TMEM229AB2RXF0 380 aa7.93□□□□□ -1.14
SMN2-205ENST00000505346 BACH1O14867 736 aa7.93□□□□□ -1.14
SMN2-205ENST00000505346 SELPP16109 830 aa7.93□□□□□ -1.14
SMN2-205ENST00000505346 RAC1P63000 192 aa7.93□□□□□ -1.14
SMN2-205ENST00000505346 SLC30A3Q99726 388 aa7.93□□□□□ -1.14
SMN2-205ENST00000505346 TXLNAP40222 546 aa7.92□□□□□ -1.14
SMN2-205ENST00000505346 SPEM2Q0P670 501 aa7.92□□□□□ -1.14
SMN2-205ENST00000505346 SFSWAPQ12872 951 aaKnown RBP7.92□□□□□ -1.14
SMN2-205ENST00000505346 L3MBTL2Q969R5 705 aa7.92□□□□□ -1.14
SMN2-205ENST00000505346 USP3Q9Y6I4 520 aa7.92□□□□□ -1.14
SMN2-205ENST00000505346 A0A0A0MRY4 1105 aa7.91□□□□□ -1.14
SMN2-205ENST00000505346 C20orf204Q6ZNR8 217 aa7.91□□□□□ -1.14
SMN2-205ENST00000505346 PLPP7Q8NBV4 271 aa7.91□□□□□ -1.14
SMN2-205ENST00000505346 USP21Q9UK80 565 aa7.91□□□□□ -1.14
SMN2-205ENST00000505346 MCTP1Q6DN14 999 aa7.9□□□□□ -1.14
SMN2-205ENST00000505346 GPC6Q9Y625 555 aaPredicted RBP7.9□□□□□ -1.14
SMN2-205ENST00000505346 PAX4O43316 350 aa7.89□□□□□ -1.15
SMN2-205ENST00000505346 ZNF232Q9UNY5 417 aa7.89□□□□□ -1.15
SMN2-205ENST00000505346 TBC1D2BQ9UPU7 963 aa7.89□□□□□ -1.15
SMN2-205ENST00000505346 EML1O00423 815 aa7.88□□□□□ -1.15
SMN2-205ENST00000505346 NOS2P35228 1153 aa7.88□□□□□ -1.15
SMN2-205ENST00000505346 TXKP42681 527 aa7.88□□□□□ -1.15
SMN2-205ENST00000505346 TEAD4Q15561 434 aa7.88□□□□□ -1.15
SMN2-205ENST00000505346 SHISA2Q6UWI4 295 aa7.88□□□□□ -1.15
SMN2-205ENST00000505346 RAB44Q7Z6P3 723 aaPredicted RBP7.88□□□□□ -1.15
SMN2-205ENST00000505346 SCHIP1Q9P0W5 487 aaPredicted RBP7.88□□□□□ -1.15
SMN2-205ENST00000505346 RNF112Q9ULX5 631 aa7.88□□□□□ -1.15
SMN2-205ENST00000505346 COBLO75128 1261 aa7.87□□□□□ -1.15
SMN2-205ENST00000505346 JPH1Q9HDC5 661 aaPredicted RBP7.87□□□□□ -1.15
SMN2-205ENST00000505346 ZDHHC1Q8WTX9 485 aa7.86□□□□□ -1.15
SMN2-205ENST00000505346 CEP63Q96MT8 703 aa7.86□□□□□ -1.15
SMN2-205ENST00000505346 ANKIB1Q9P2G1 1089 aa7.86□□□□□ -1.15
SMN2-205ENST00000505346 TBC1D8BQ0IIM8 1120 aa7.85□□□□□ -1.15
SMN2-205ENST00000505346 RHPN1Q8TCX5 695 aa7.85□□□□□ -1.15
SMN2-205ENST00000505346 IGFLR1Q9H665 355 aa7.85□□□□□ -1.15
SMN2-205ENST00000505346 BRD7Q9NPI1 651 aa7.85□□□□□ -1.15
SMN2-205ENST00000505346 PCDHGA11Q9Y5H2 935 aa7.85□□□□□ -1.15
SMN2-205ENST00000505346 COL17A1Q9UMD9 1497 aaPredicted RBP7.84□□□□□ -1.15
SMN2-205ENST00000505346 VAC14Q08AM6 782 aa7.84□□□□□ -1.15
SMN2-205ENST00000505346 SEMA3FQ13275 785 aa7.84□□□□□ -1.15
SMN2-205ENST00000505346 NUDT8Q8WV74 236 aa7.84□□□□□ -1.15
SMN2-205ENST00000505346 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
SMN2-205ENST00000505346 BHMTQ93088 406 aa7.84□□□□□ -1.15
SMN2-205ENST00000505346 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.15
SMN2-205ENST00000505346 UBE2OQ9C0C9 1292 aaKnown RBP7.84□□□□□ -1.15
SMN2-205ENST00000505346 PCMTD2Q9NV79 361 aa7.84□□□□□ -1.15
SMN2-205ENST00000505346 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
SMN2-205ENST00000505346 SERTM1A2A2V5 107 aa7.83□□□□□ -1.16
SMN2-205ENST00000505346 SFI1A8K8P3 1242 aa7.83□□□□□ -1.16
SMN2-205ENST00000505346 YBX3P16989 372 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMN2-205ENST00000505346 PSME1Q06323 249 aa7.83□□□□□ -1.16
SMN2-205ENST00000505346 IRF5Q13568 498 aa7.83□□□□□ -1.16
SMN2-205ENST00000505346 DMRTC2Q8IXT2 367 aaPredicted RBP7.83□□□□□ -1.16
SMN2-205ENST00000505346 FMR1NBQ8N0W7 255 aaPredicted RBP7.83□□□□□ -1.16
SMN2-205ENST00000505346 KCNQ4P56696 695 aa7.82□□□□□ -1.16
SMN2-205ENST00000505346 EML3Q32P44 896 aa7.82□□□□□ -1.16
SMN2-205ENST00000505346 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMN2-205ENST00000505346 NOD1Q9Y239 953 aa7.82□□□□□ -1.16
SMN2-205ENST00000505346 WASHC4Q2M389 1173 aa7.81□□□□□ -1.16
SMN2-205ENST00000505346 SLC9A9Q8IVB4 645 aa7.81□□□□□ -1.16
SMN2-205ENST00000505346 ZNF358Q9NW07 568 aa7.81□□□□□ -1.16
SMN2-205ENST00000505346 SLC6A14Q9UN76 642 aa7.81□□□□□ -1.16
SMN2-205ENST00000505346 RGS9O75916 674 aaPredicted RBP7.8□□□□□ -1.16
SMN2-205ENST00000505346 AFF1P51825 1210 aaKnown RBP7.8□□□□□ -1.16
SMN2-205ENST00000505346 TBCELQ5QJ74 424 aa7.8□□□□□ -1.16
SMN2-205ENST00000505346 C1orf53Q5VUE5 145 aa7.8□□□□□ -1.16
SMN2-205ENST00000505346 PSAPL1Q6NUJ1 521 aa7.8□□□□□ -1.16
SMN2-205ENST00000505346 SLC51AQ86UW1 340 aa7.8□□□□□ -1.16
SMN2-205ENST00000505346 WFDC12Q8WWY7 111 aa7.8□□□□□ -1.16
SMN2-205ENST00000505346 CHMP3Q9Y3E7 222 aa7.8□□□□□ -1.16
SMN2-205ENST00000505346 SOX11P35716 441 aa7.79□□□□□ -1.16
SMN2-205ENST00000505346 IREB2P48200 963 aaKnown RBP7.79□□□□□ -1.16
SMN2-205ENST00000505346 GTF2IP78347 998 aa7.79□□□□□ -1.16
SMN2-205ENST00000505346 EFCC1Q9HA90 598 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms