RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 NBPF6Q5VWK0 638 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 NME9Q86XW9 330 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.14□□□□□ -1.43
CPNE4-204ENST00000505331 SYNE4Q8N205 404 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 NBPF4Q96M43 638 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 SLC4A9Q96Q91 983 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 STXBP5LQ9Y2K9 1186 aa6.14□□□□□ -1.43
CPNE4-204ENST00000505331 CENPJQ9HC77 1338 aaPredicted RBP6.14□□□□□ -1.43
CPNE4-204ENST00000505331 HUNKP57058 714 aa6.13□□□□□ -1.43
CPNE4-204ENST00000505331 NFIXQ14938 502 aa6.13□□□□□ -1.43
CPNE4-204ENST00000505331 RGMBQ6NW40 437 aa6.13□□□□□ -1.43
CPNE4-204ENST00000505331 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
CPNE4-204ENST00000505331 ZNF296Q8WUU4 475 aaPredicted RBP6.13□□□□□ -1.43
CPNE4-204ENST00000505331 CNKSR1Q969H4 720 aa6.13□□□□□ -1.43
CPNE4-204ENST00000505331 KAT6BQ8WYB5 2073 aa6.13□□□□□ -1.43
CPNE4-204ENST00000505331 EPS15P42566 896 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 AMPHP49418 695 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 FKBP4Q02790 459 aaKnown RBP eCLIP6.12□□□□□ -1.43
CPNE4-204ENST00000505331 CCDC93Q567U6 631 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 NOM1Q5C9Z4 860 aaKnown RBP6.12□□□□□ -1.43
CPNE4-204ENST00000505331 USPL1Q5W0Q7 1092 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 EVC2Q86UK5 1308 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 CUL9Q8IWT3 2517 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 USHBP1Q8N6Y0 703 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 SNX27Q96L92 541 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 CSRNP1Q96S65 589 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 BRIP1Q9BX63 1249 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 ZNF408Q9H9D4 720 aa6.12□□□□□ -1.43
CPNE4-204ENST00000505331 MKI67P46013 3256 aaKnown RBP6.12□□□□□ -1.43
CPNE4-204ENST00000505331 MAP2P11137 1827 aaKnown RBP6.11□□□□□ -1.43
CPNE4-204ENST00000505331 FAM208AQ9UK61 1670 aaKnown RBP6.11□□□□□ -1.43
CPNE4-204ENST00000505331 ERBB4Q15303 1308 aa6.11□□□□□ -1.43
CPNE4-204ENST00000505331 A0A1W2PPC1 479 aa6.11□□□□□ -1.43
CPNE4-204ENST00000505331 EN2P19622 333 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-204ENST00000505331 CRKLP46109 303 aaKnown RBP6.11□□□□□ -1.43
CPNE4-204ENST00000505331 SCNN1DP51172 638 aa6.11□□□□□ -1.43
CPNE4-204ENST00000505331 LHX8Q68G74 356 aa6.11□□□□□ -1.43
CPNE4-204ENST00000505331 STYK1Q6J9G0 422 aa6.11□□□□□ -1.43
CPNE4-204ENST00000505331 PRPF40BQ6NWY9 871 aaKnown RBP6.11□□□□□ -1.43
CPNE4-204ENST00000505331 ZNF277Q9NRM2 450 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-204ENST00000505331 GJA3Q9Y6H8 435 aa6.11□□□□□ -1.43
CPNE4-204ENST00000505331 CARMIL3Q8ND23 1372 aa6.1□□□□□ -1.43
CPNE4-204ENST00000505331 ZNF157P51786 506 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-204ENST00000505331 EIF6P56537 245 aaKnown RBP6.1□□□□□ -1.43
CPNE4-204ENST00000505331 GPR153Q6NV75 609 aa6.1□□□□□ -1.43
CPNE4-204ENST00000505331 CDC37L1Q7L3B6 337 aa6.1□□□□□ -1.43
CPNE4-204ENST00000505331 CCDC24Q8N4L8 307 aa6.1□□□□□ -1.43
CPNE4-204ENST00000505331 JDP2Q8WYK2 163 aa6.1□□□□□ -1.43
CPNE4-204ENST00000505331 GLIS2Q9BZE0 524 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-204ENST00000505331 PRO3102Q9H379 93 aa6.1□□□□□ -1.43
CPNE4-204ENST00000505331 ADARB2Q9NS39 739 aaKnown RBP6.1□□□□□ -1.43
CPNE4-204ENST00000505331 PGAP2Q9UHJ9 254 aa6.1□□□□□ -1.43
CPNE4-204ENST00000505331 SPG7Q9UQ90 795 aa6.1□□□□□ -1.43
CPNE4-204ENST00000505331 SBNO2Q9Y2G9 1366 aa6.09□□□□□ -1.43
CPNE4-204ENST00000505331 IARSP41252 1262 aaKnown RBP6.09□□□□□ -1.43
CPNE4-204ENST00000505331 RTKN2Q8IZC4 609 aa6.09□□□□□ -1.43
CPNE4-204ENST00000505331 ZC3H15Q8WU90 426 aaKnown RBP6.09□□□□□ -1.43
CPNE4-204ENST00000505331 C7orf43Q8WVR3 580 aa6.09□□□□□ -1.43
CPNE4-204ENST00000505331 NARFQ9UHQ1 456 aa6.09□□□□□ -1.43
CPNE4-204ENST00000505331 RTL1A6NKG5 1358 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 GPR25O00155 361 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 SOX1O00570 391 aaPredicted RBP6.08□□□□□ -1.44
CPNE4-204ENST00000505331 TBC1D8O95759 1140 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 SLC10A3P09131 477 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 SRGNP10124 158 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 INTS5Q6P9B9 1019 aaKnown RBP6.08□□□□□ -1.44
CPNE4-204ENST00000505331 DEFB123Q8N688 67 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 C2orf69Q8N8R5 385 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 MASTLQ96GX5 879 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 LRCH3Q96II8 777 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 TMEM106CQ9BVX2 250 aa6.08□□□□□ -1.44
CPNE4-204ENST00000505331 FARP1Q9Y4F1 1045 aaPredicted RBP6.08□□□□□ -1.44
CPNE4-204ENST00000505331 LOC105371045A0A1W2PR82 267 aa6.07□□□□□ -1.44
CPNE4-204ENST00000505331 FKTNO75072 461 aa6.07□□□□□ -1.44
CPNE4-204ENST00000505331 CD44P16070 742 aaKnown RBP6.07□□□□□ -1.44
CPNE4-204ENST00000505331 IFNL2Q8IZJ0 200 aa6.07□□□□□ -1.44
CPNE4-204ENST00000505331 ARMC5Q96C12 935 aa6.07□□□□□ -1.44
CPNE4-204ENST00000505331 GBA2Q9HCG7 927 aaPredicted RBP6.07□□□□□ -1.44
CPNE4-204ENST00000505331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.07□□□□□ -1.44
CPNE4-204ENST00000505331 GPRC5DQ9NZD1 345 aa6.07□□□□□ -1.44
CPNE4-204ENST00000505331 RAPGEFL1Q9UHV5 662 aa6.07□□□□□ -1.44
CPNE4-204ENST00000505331 DLEC1Q9Y238 1755 aa6.07□□□□□ -1.44
CPNE4-204ENST00000505331 SOS1Q07889 1333 aaPredicted RBP6.06□□□□□ -1.44
CPNE4-204ENST00000505331 DICER1Q9UPY3 1922 aaKnown RBP6.06□□□□□ -1.44
CPNE4-204ENST00000505331 ERVV-2B6SEH9 535 aa6.06□□□□□ -1.44
CPNE4-204ENST00000505331 PHKG2P15735 406 aa6.06□□□□□ -1.44
CPNE4-204ENST00000505331 HDGFL2Q7Z4V5 671 aaPredicted RBP6.06□□□□□ -1.44
CPNE4-204ENST00000505331 BCL2L12Q9HB09 334 aa6.06□□□□□ -1.44
CPNE4-204ENST00000505331 FER1L6Q2WGJ9 1857 aa6.06□□□□□ -1.44
CPNE4-204ENST00000505331 LTN1O94822 1766 aa6.06□□□□□ -1.44
CPNE4-204ENST00000505331 UNC80Q8N2C7 3258 aa6.05□□□□□ -1.44
CPNE4-204ENST00000505331 NRXN2Q9P2S2 1712 aa6.05□□□□□ -1.44
CPNE4-204ENST00000505331 SYNGAP1Q96PV0 1343 aa6.05□□□□□ -1.44
CPNE4-204ENST00000505331 ZNF831Q5JPB2 1677 aa6.05□□□□□ -1.44
CPNE4-204ENST00000505331 PTCD1O75127 700 aaKnown RBP6.05□□□□□ -1.44
CPNE4-204ENST00000505331 PRR5LQ6MZQ0 368 aa6.05□□□□□ -1.44
CPNE4-204ENST00000505331 USP48Q86UV5 1035 aa6.05□□□□□ -1.44
CPNE4-204ENST00000505331 DPF3Q92784 378 aa6.05□□□□□ -1.44
CPNE4-204ENST00000505331 SYMPKQ92797 1274 aaKnown RBP6.05□□□□□ -1.44
CPNE4-204ENST00000505331 COG3Q96JB2 828 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms