RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 HSH2DQ96JZ2 352 aa10.52□□□□□ -0.73
TRAPPC13-207ENST00000505108 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
TRAPPC13-207ENST00000505108 ZNF787Q6DD87 383 aa10.51□□□□□ -0.73
TRAPPC13-207ENST00000505108 SUSD3Q96L08 255 aa10.51□□□□□ -0.73
TRAPPC13-207ENST00000505108 PATL2C9JE40 543 aaKnown RBP10.5□□□□□ -0.73
TRAPPC13-207ENST00000505108 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
TRAPPC13-207ENST00000505108 ITGA6P23229 1130 aa10.5□□□□□ -0.73
TRAPPC13-207ENST00000505108 DBN1Q16643 649 aa10.5□□□□□ -0.73
TRAPPC13-207ENST00000505108 C11orf91Q3C1V1 193 aa10.5□□□□□ -0.73
TRAPPC13-207ENST00000505108 LRRC69Q6ZNQ3 347 aa10.5□□□□□ -0.73
TRAPPC13-207ENST00000505108 EGFL7Q9UHF1 273 aa10.5□□□□□ -0.73
TRAPPC13-207ENST00000505108 SOWAHDA6NJG2 315 aa10.49□□□□□ -0.73
TRAPPC13-207ENST00000505108 ICMTO60725 284 aa10.49□□□□□ -0.73
TRAPPC13-207ENST00000505108 ECM1Q16610 540 aa10.49□□□□□ -0.73
TRAPPC13-207ENST00000505108 ETFBKMTQ8IXQ9 262 aa10.49□□□□□ -0.73
TRAPPC13-207ENST00000505108 PGBD3Q8N328 593 aa10.49□□□□□ -0.73
TRAPPC13-207ENST00000505108 IFT43Q96FT9 208 aa10.49□□□□□ -0.73
TRAPPC13-207ENST00000505108 GPC6Q9Y625 555 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC13-207ENST00000505108 ZBTB7CA1YPR0 619 aa10.48□□□□□ -0.73
TRAPPC13-207ENST00000505108 H3BRB1 525 aa10.48□□□□□ -0.73
TRAPPC13-207ENST00000505108 ZBTB39O15060 712 aa10.48□□□□□ -0.73
TRAPPC13-207ENST00000505108 FKBP4Q02790 459 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRAPPC13-207ENST00000505108 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC13-207ENST00000505108 TUT1Q9H6E5 874 aaKnown RBP10.48□□□□□ -0.73
TRAPPC13-207ENST00000505108 STIM2Q9P246 746 aa10.48□□□□□ -0.73
TRAPPC13-207ENST00000505108 VEGFBP49765 207 aa10.47□□□□□ -0.73
TRAPPC13-207ENST00000505108 UBAP2LQ14157 1087 aaKnown RBP10.47□□□□□ -0.73
TRAPPC13-207ENST00000505108 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
TRAPPC13-207ENST00000505108 DMGDHQ9UI17 866 aaKnown RBP10.47□□□□□ -0.73
TRAPPC13-207ENST00000505108 MPSTP25325 297 aa10.46□□□□□ -0.73
TRAPPC13-207ENST00000505108 SF3B2Q13435 895 aaKnown RBP10.46□□□□□ -0.73
TRAPPC13-207ENST00000505108 ZNF837Q96EG3 531 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC13-207ENST00000505108 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.73
TRAPPC13-207ENST00000505108 TGFBR3LH3BV60 316 aa10.45□□□□□ -0.74
TRAPPC13-207ENST00000505108 NPR3P17342 541 aa10.45□□□□□ -0.74
TRAPPC13-207ENST00000505108 BRD2P25440 801 aaKnown RBP10.45□□□□□ -0.74
TRAPPC13-207ENST00000505108 NLRP8Q86W28 1048 aa10.45□□□□□ -0.74
TRAPPC13-207ENST00000505108 ZCCHC2Q9C0B9 1178 aaKnown RBP10.45□□□□□ -0.74
TRAPPC13-207ENST00000505108 EFHC2Q5JST6 749 aa10.44□□□□□ -0.74
TRAPPC13-207ENST00000505108 TREML1Q86YW5 311 aa10.44□□□□□ -0.74
TRAPPC13-207ENST00000505108 GLYCTKQ8IVS8 523 aa10.44□□□□□ -0.74
TRAPPC13-207ENST00000505108 NEUROD4Q9HD90 331 aa10.44□□□□□ -0.74
TRAPPC13-207ENST00000505108 ANKIB1Q9P2G1 1089 aa10.44□□□□□ -0.74
TRAPPC13-207ENST00000505108 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
TRAPPC13-207ENST00000505108 GJA3Q9Y6H8 435 aa10.44□□□□□ -0.74
TRAPPC13-207ENST00000505108 H7C1W4 665 aa10.43□□□□□ -0.74
TRAPPC13-207ENST00000505108 MICAL2O94851 1124 aa10.43□□□□□ -0.74
TRAPPC13-207ENST00000505108 BTLAQ7Z6A9 289 aa10.43□□□□□ -0.74
TRAPPC13-207ENST00000505108 ATCAYQ86WG3 371 aa10.43□□□□□ -0.74
TRAPPC13-207ENST00000505108 VWA5B2Q8N398 1253 aa10.43□□□□□ -0.74
TRAPPC13-207ENST00000505108 HCN2Q9UL51 889 aa10.43□□□□□ -0.74
TRAPPC13-207ENST00000505108 CDC14CA4D256 554 aa10.42□□□□□ -0.74
TRAPPC13-207ENST00000505108 EIF1AXP47813 144 aaKnown RBP10.42□□□□□ -0.74
TRAPPC13-207ENST00000505108 ARHGAP4P98171 946 aa10.42□□□□□ -0.74
TRAPPC13-207ENST00000505108 LBRQ14739 615 aaKnown RBP10.42□□□□□ -0.74
TRAPPC13-207ENST00000505108 HIF1AQ16665 826 aa10.42□□□□□ -0.74
TRAPPC13-207ENST00000505108 IER5Q5VY09 327 aa10.42□□□□□ -0.74
TRAPPC13-207ENST00000505108 GTPBP3Q969Y2 492 aaKnown RBP10.42□□□□□ -0.74
TRAPPC13-207ENST00000505108 OPLAHO14841 1288 aa10.41□□□□□ -0.74
TRAPPC13-207ENST00000505108 FAM13AO94988 1023 aa10.41□□□□□ -0.74
TRAPPC13-207ENST00000505108 TYRO3Q06418 890 aa10.41□□□□□ -0.74
TRAPPC13-207ENST00000505108 SAMD5Q5TGI4 173 aa10.41□□□□□ -0.74
TRAPPC13-207ENST00000505108 SND1Q7KZF4 910 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRAPPC13-207ENST00000505108 NDFIP2Q9NV92 336 aa10.41□□□□□ -0.74
TRAPPC13-207ENST00000505108 GPR25O00155 361 aa10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 ATXN7O15265 892 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 BNIP3LO60238 219 aa10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 INPP5BP32019 993 aa10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 IDH3AP50213 366 aa10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 NOM1Q5C9Z4 860 aaKnown RBP10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 ABTB2Q8N961 1025 aa10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 CEP63Q96MT8 703 aa10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 BIN2Q9UBW5 565 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 PCDHGC4Q9Y5F7 938 aa10.4□□□□□ -0.74
TRAPPC13-207ENST00000505108 DCDC2BA2VCK2 349 aa10.39□□□□□ -0.75
TRAPPC13-207ENST00000505108 H3BM21 787 aa10.39□□□□□ -0.75
TRAPPC13-207ENST00000505108 GRNP28799 593 aaKnown RBP10.39□□□□□ -0.75
TRAPPC13-207ENST00000505108 ZAP70P43403 619 aa10.39□□□□□ -0.75
TRAPPC13-207ENST00000505108 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
TRAPPC13-207ENST00000505108 GMCL1Q96IK5 515 aa10.39□□□□□ -0.75
TRAPPC13-207ENST00000505108 USP20Q9Y2K6 914 aa10.39□□□□□ -0.75
TRAPPC13-207ENST00000505108 EFSO43281 561 aa10.38□□□□□ -0.75
TRAPPC13-207ENST00000505108 TNP2Q05952 138 aa10.38□□□□□ -0.75
TRAPPC13-207ENST00000505108 FIGNL1Q6PIW4 674 aa10.38□□□□□ -0.75
TRAPPC13-207ENST00000505108 STRN4Q9NRL3 753 aa10.38□□□□□ -0.75
TRAPPC13-207ENST00000505108 TERTO14746 1132 aaKnown RBP10.37□□□□□ -0.75
TRAPPC13-207ENST00000505108 KHNYNO15037 678 aaKnown RBP10.37□□□□□ -0.75
TRAPPC13-207ENST00000505108 FZD6O60353 706 aa10.37□□□□□ -0.75
TRAPPC13-207ENST00000505108 FAM157BP0CG42 384 aa10.37□□□□□ -0.75
TRAPPC13-207ENST00000505108 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
TRAPPC13-207ENST00000505108 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
TRAPPC13-207ENST00000505108 BRD7Q9NPI1 651 aa10.37□□□□□ -0.75
TRAPPC13-207ENST00000505108 CCDC87Q9NVE4 849 aa10.37□□□□□ -0.75
TRAPPC13-207ENST00000505108 MAPTP10636 758 aaKnown RBP10.36□□□□□ -0.75
TRAPPC13-207ENST00000505108 SFSWAPQ12872 951 aaKnown RBP10.36□□□□□ -0.75
TRAPPC13-207ENST00000505108 GRIN2CQ14957 1233 aa10.36□□□□□ -0.75
TRAPPC13-207ENST00000505108 NPAS3Q8IXF0 933 aa10.36□□□□□ -0.75
TRAPPC13-207ENST00000505108 GPR152Q8TDT2 470 aa10.36□□□□□ -0.75
TRAPPC13-207ENST00000505108 ERBB4Q15303 1308 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms