RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 HDGFL1Q5TGJ6 251 aa26.15■■□□□ 1.78
HERC6-205ENST00000504905 CAMTA2O94983 1202 aa26.14■■□□□ 1.78
HERC6-205ENST00000504905 KIAA1551Q9HCM1 1747 aa26.14■■□□□ 1.77
HERC6-205ENST00000504905 ELL2O00472 640 aaPredicted RBP26.12■■□□□ 1.77
HERC6-205ENST00000504905 TM4SF1P30408 202 aa26.12■■□□□ 1.77
HERC6-205ENST00000504905 C8orf58Q8NAV2 365 aa26.12■■□□□ 1.77
HERC6-205ENST00000504905 FANCIQ9NVI1 1328 aa26.12■■□□□ 1.77
HERC6-205ENST00000504905 NFIXQ14938 502 aa26.11■■□□□ 1.77
HERC6-205ENST00000504905 PDIA6Q15084 440 aa26.11■■□□□ 1.77
HERC6-205ENST00000504905 ZNF521Q96K83 1311 aa26.11■■□□□ 1.77
HERC6-205ENST00000504905 ANXA1P04083 346 aa26.1■■□□□ 1.77
HERC6-205ENST00000504905 DDR1Q08345 913 aa26.1■■□□□ 1.77
HERC6-205ENST00000504905 PROSER3Q2NL68 480 aa26.1■■□□□ 1.77
HERC6-205ENST00000504905 KIF6Q6ZMV9 814 aa26.1■■□□□ 1.77
HERC6-205ENST00000504905 DDX21Q9NR30 783 aaKnown RBP eCLIP26.1■■□□□ 1.77
HERC6-205ENST00000504905 ZNF652Q9Y2D9 606 aa26.1■■□□□ 1.77
HERC6-205ENST00000504905 C10orf71Q711Q0 1435 aa26.1■■□□□ 1.77
HERC6-205ENST00000504905 BICDL1Q6ZP65 573 aa26.09■■□□□ 1.77
HERC6-205ENST00000504905 MYH16Q9H6N6 1097 aa26.09■■□□□ 1.77
HERC6-205ENST00000504905 CHPF2Q9P2E5 772 aa26.09■■□□□ 1.77
HERC6-205ENST00000504905 N4BP2Q86UW6 1770 aaPredicted RBP26.09■■□□□ 1.77
HERC6-205ENST00000504905 A0A0G2JLW4 131 aa26.08■■□□□ 1.77
HERC6-205ENST00000504905 POLRMTO00411 1230 aaKnown RBP26.08■■□□□ 1.77
HERC6-205ENST00000504905 GOLGA2Q08379 1002 aa26.08■■□□□ 1.77
HERC6-205ENST00000504905 TBC1D9BQ66K14 1250 aa26.08■■□□□ 1.77
HERC6-205ENST00000504905 CLEC4GQ6UXB4 293 aa26.08■■□□□ 1.77
HERC6-205ENST00000504905 TTLL7Q6ZT98 887 aa26.08■■□□□ 1.77
HERC6-205ENST00000504905 CHMP4AQ9BY43 222 aa26.08■■□□□ 1.77
HERC6-205ENST00000504905 SPINK5Q9NQ38 1064 aaPredicted RBP26.08■■□□□ 1.77
HERC6-205ENST00000504905 BCS1LQ9Y276 419 aa26.08■■□□□ 1.77
HERC6-205ENST00000504905 AFDNP55196 1824 aaKnown RBP26.08■■□□□ 1.77
HERC6-205ENST00000504905 RGL2O15211 777 aa26.07■■□□□ 1.76
HERC6-205ENST00000504905 LRP10Q7Z4F1 713 aa26.07■■□□□ 1.76
HERC6-205ENST00000504905 TSPYL6Q8N831 410 aa26.07■■□□□ 1.76
HERC6-205ENST00000504905 DBF4Q9UBU7 674 aaPredicted RBP26.07■■□□□ 1.76
HERC6-205ENST00000504905 MAP3K15Q6ZN16 1313 aa26.07■■□□□ 1.76
HERC6-205ENST00000504905 NUP98P52948 1817 aa26.07■■□□□ 1.76
HERC6-205ENST00000504905 TOMM70O94826 608 aa26.06■■□□□ 1.76
HERC6-205ENST00000504905 APLP1P51693 650 aa26.06■■□□□ 1.76
HERC6-205ENST00000504905 ERVV-1B6SEH8 477 aa26.05■■□□□ 1.76
HERC6-205ENST00000504905 TWISTNBQ3B726 338 aaPredicted RBP26.05■■□□□ 1.76
HERC6-205ENST00000504905 SETDB2Q96T68 719 aa26.05■■□□□ 1.76
HERC6-205ENST00000504905 SERPINB2P05120 415 aa26.04■■□□□ 1.76
HERC6-205ENST00000504905 HLFQ16534 295 aa26.04■■□□□ 1.76
HERC6-205ENST00000504905 CCDC30Q5VVM6 783 aa26.04■■□□□ 1.76
HERC6-205ENST00000504905 ARHGAP27Q6ZUM4 889 aa26.04■■□□□ 1.76
HERC6-205ENST00000504905 ZBTB3Q9H5J0 574 aa26.04■■□□□ 1.76
HERC6-205ENST00000504905 NRXN2Q9P2S2 1712 aa26.04■■□□□ 1.76
HERC6-205ENST00000504905 CARMIL3Q8ND23 1372 aa26.04■■□□□ 1.76
HERC6-205ENST00000504905 DPEP1P16444 411 aa26.03■■□□□ 1.76
HERC6-205ENST00000504905 AIMP1Q12904 312 aaKnown RBP26.03■■□□□ 1.76
HERC6-205ENST00000504905 COPS6Q7L5N1 327 aa26.03■■□□□ 1.76
HERC6-205ENST00000504905 XAGE3Q8WTP9 111 aa26.03■■□□□ 1.76
HERC6-205ENST00000504905 HYPKQ9NX55 129 aa26.03■■□□□ 1.76
HERC6-205ENST00000504905 EXOSC9Q06265 439 aaKnown RBP26.02■■□□□ 1.76
HERC6-205ENST00000504905 BRCA1P38398 1863 aaKnown RBP26.02■■□□□ 1.76
HERC6-205ENST00000504905 NIP7Q9Y221 180 aaKnown RBP eCLIP26.01■■□□□ 1.75
HERC6-205ENST00000504905 E9PSI1 815 aa26■■□□□ 1.75
HERC6-205ENST00000504905 KCNA3P22001 575 aa26■■□□□ 1.75
HERC6-205ENST00000504905 DNAJC5GQ8N7S2 189 aa26■■□□□ 1.75
HERC6-205ENST00000504905 STK31Q9BXU1 1019 aa25.99■■□□□ 1.75
HERC6-205ENST00000504905 NPHP1O15259 732 aa25.98■■□□□ 1.75
HERC6-205ENST00000504905 GIGYF2Q6Y7W6 1299 aaKnown RBP25.98■■□□□ 1.75
HERC6-205ENST00000504905 NMRK2Q9NPI5 230 aa25.98■■□□□ 1.75
HERC6-205ENST00000504905 ARFGEF1Q9Y6D6 1849 aa25.96■■□□□ 1.75
HERC6-205ENST00000504905 VAMP4O75379 141 aa25.96■■□□□ 1.75
HERC6-205ENST00000504905 SLFN5Q08AF3 891 aa25.96■■□□□ 1.75
HERC6-205ENST00000504905 NBPF5PQ86XG9 351 aaPredicted RBP25.96■■□□□ 1.75
HERC6-205ENST00000504905 CNBD1Q8NA66 436 aa25.96■■□□□ 1.75
HERC6-205ENST00000504905 ANKRD36CQ5JPF3 1778 aa25.96■■□□□ 1.75
HERC6-205ENST00000504905 CACNA1FO60840 1977 aa25.95■■□□□ 1.75
HERC6-205ENST00000504905 TCERG1O14776 1098 aaKnown RBP25.95■■□□□ 1.74
HERC6-205ENST00000504905 HNRNPUQ00839 825 aaKnown RBP eCLIP25.95■■□□□ 1.74
HERC6-205ENST00000504905 PIM2Q9P1W9 311 aa25.95■■□□□ 1.74
HERC6-205ENST00000504905 GPTP24298 496 aa25.94■■□□□ 1.74
HERC6-205ENST00000504905 C9orf131Q5VYM1 1079 aa25.94■■□□□ 1.74
HERC6-205ENST00000504905 PRR5LQ6MZQ0 368 aa25.94■■□□□ 1.74
HERC6-205ENST00000504905 ANKRD13DQ6ZTN6 518 aa25.94■■□□□ 1.74
HERC6-205ENST00000504905 PLBD2Q8NHP8 589 aa25.94■■□□□ 1.74
HERC6-205ENST00000504905 CDCA7LQ96GN5 454 aa25.94■■□□□ 1.74
HERC6-205ENST00000504905 PHAXQ9H814 394 aaKnown RBP25.94■■□□□ 1.74
HERC6-205ENST00000504905 ARFGEF2Q9Y6D5 1785 aa25.93■■□□□ 1.74
HERC6-205ENST00000504905 ST5P78524 1137 aa25.93■■□□□ 1.74
HERC6-205ENST00000504905 HSP90AB3PQ58FF7 597 aa25.93■■□□□ 1.74
HERC6-205ENST00000504905 RBM46Q8TBY0 533 aaKnown RBP25.93■■□□□ 1.74
HERC6-205ENST00000504905 ANKRD31Q8N7Z5 1873 aa25.92■■□□□ 1.74
HERC6-205ENST00000504905 FAM177BA6PVY3 158 aa25.92■■□□□ 1.74
HERC6-205ENST00000504905 TPTE2Q6XPS3 522 aa25.92■■□□□ 1.74
HERC6-205ENST00000504905 ZNF34Q8IZ26 560 aa25.92■■□□□ 1.74
HERC6-205ENST00000504905 SLC4A2P04920 1241 aa25.91■■□□□ 1.74
HERC6-205ENST00000504905 CCDC24Q8N4L8 307 aa25.91■■□□□ 1.74
HERC6-205ENST00000504905 NYXQ9GZU5 481 aa25.91■■□□□ 1.74
HERC6-205ENST00000504905 UBN2Q6ZU65 1347 aa25.9■■□□□ 1.74
HERC6-205ENST00000504905 DALRD3Q5D0E6 543 aaKnown RBP25.9■■□□□ 1.74
HERC6-205ENST00000504905 RIC3Q7Z5B4 369 aa25.9■■□□□ 1.74
HERC6-205ENST00000504905 DDX58O95786 925 aaKnown RBP25.89■■□□□ 1.74
HERC6-205ENST00000504905 GTF2E1P29083 439 aaPredicted RBP25.89■■□□□ 1.74
HERC6-205ENST00000504905 TCIRG1Q13488 830 aa25.89■■□□□ 1.74
HERC6-205ENST00000504905 PARP10Q53GL7 1025 aa25.89■■□□□ 1.74
HERC6-205ENST00000504905 BRIP1Q9BX63 1249 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms