RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
USP17L28-201ENST00000504543 NBPF15Q8N660 670 aa12.97□□□□□ -0.33
USP17L28-201ENST00000504543 ZPR1O75312 459 aa12.96□□□□□ -0.33
USP17L28-201ENST00000504543 PHF14O94880 888 aa12.96□□□□□ -0.33
USP17L28-201ENST00000504543 CENPQQ7L2Z9 268 aaPredicted RBP12.96□□□□□ -0.33
USP17L28-201ENST00000504543 FRAT1Q92837 279 aaPredicted RBP12.96□□□□□ -0.33
USP17L28-201ENST00000504543 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
USP17L28-201ENST00000504543 SCN7AQ01118 1682 aa12.96□□□□□ -0.33
USP17L28-201ENST00000504543 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
USP17L28-201ENST00000504543 PDIA6Q15084 440 aa12.95□□□□□ -0.34
USP17L28-201ENST00000504543 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
USP17L28-201ENST00000504543 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
USP17L28-201ENST00000504543 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
USP17L28-201ENST00000504543 DBF4Q9UBU7 674 aaPredicted RBP12.95□□□□□ -0.34
USP17L28-201ENST00000504543 BCORQ6W2J9 1755 aa12.95□□□□□ -0.34
USP17L28-201ENST00000504543 IPO8O15397 1037 aaKnown RBP12.94□□□□□ -0.34
USP17L28-201ENST00000504543 VAMP4O75379 141 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 ATF7IPQ6VMQ6 1270 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 DZIP1LQ8IYY4 767 aaKnown RBP12.94□□□□□ -0.34
USP17L28-201ENST00000504543 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
USP17L28-201ENST00000504543 CAMTA2O94983 1202 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 TM4SF1P30408 202 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 MVPQ14764 893 aaKnown RBP12.94□□□□□ -0.34
USP17L28-201ENST00000504543 TWISTNBQ3B726 338 aaPredicted RBP12.94□□□□□ -0.34
USP17L28-201ENST00000504543 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
USP17L28-201ENST00000504543 FTSJ3Q8IY81 847 aaKnown RBP12.94□□□□□ -0.34
USP17L28-201ENST00000504543 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 ARHGAP45Q92619 1136 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 HYPKQ9NX55 129 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
USP17L28-201ENST00000504543 RLBP1P12271 317 aa12.93□□□□□ -0.34
USP17L28-201ENST00000504543 TRIM27P14373 513 aa12.93□□□□□ -0.34
USP17L28-201ENST00000504543 CCDC30Q5VVM6 783 aa12.93□□□□□ -0.34
USP17L28-201ENST00000504543 ARXQ96QS3 562 aa12.93□□□□□ -0.34
USP17L28-201ENST00000504543 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
USP17L28-201ENST00000504543 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
USP17L28-201ENST00000504543 EIF2S2P20042 333 aaKnown RBP12.92□□□□□ -0.34
USP17L28-201ENST00000504543 KRT24Q2M2I5 525 aa12.92□□□□□ -0.34
USP17L28-201ENST00000504543 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
USP17L28-201ENST00000504543 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
USP17L28-201ENST00000504543 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
USP17L28-201ENST00000504543 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
USP17L28-201ENST00000504543 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
USP17L28-201ENST00000504543 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
USP17L28-201ENST00000504543 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
USP17L28-201ENST00000504543 CD2APQ9Y5K6 639 aa12.91□□□□□ -0.34
USP17L28-201ENST00000504543 KIF13BQ9NQT8 1826 aa12.91□□□□□ -0.34
USP17L28-201ENST00000504543 TCERG1O14776 1098 aaKnown RBP12.9□□□□□ -0.34
USP17L28-201ENST00000504543 MMP10P09238 476 aa12.9□□□□□ -0.34
USP17L28-201ENST00000504543 TSPYL6Q8N831 410 aa12.9□□□□□ -0.34
USP17L28-201ENST00000504543 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
USP17L28-201ENST00000504543 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
USP17L28-201ENST00000504543 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
USP17L28-201ENST00000504543 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.35
USP17L28-201ENST00000504543 CHPF2Q9P2E5 772 aa12.9□□□□□ -0.35
USP17L28-201ENST00000504543 PPP1R1BQ9UD71 204 aaPredicted RBP12.9□□□□□ -0.35
USP17L28-201ENST00000504543 TNNQ9UQP3 1299 aa12.9□□□□□ -0.35
USP17L28-201ENST00000504543 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.35
USP17L28-201ENST00000504543 NUP98P52948 1817 aa12.89□□□□□ -0.35
USP17L28-201ENST00000504543 ABCC4O15439 1325 aa12.89□□□□□ -0.35
USP17L28-201ENST00000504543 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
USP17L28-201ENST00000504543 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
USP17L28-201ENST00000504543 NFIXQ14938 502 aa12.89□□□□□ -0.35
USP17L28-201ENST00000504543 HSP90AB3PQ58FF7 597 aa12.89□□□□□ -0.35
USP17L28-201ENST00000504543 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
USP17L28-201ENST00000504543 GIGYF2Q6Y7W6 1299 aaKnown RBP12.89□□□□□ -0.35
USP17L28-201ENST00000504543 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
USP17L28-201ENST00000504543 MYL6BP14649 208 aa12.88□□□□□ -0.35
USP17L28-201ENST00000504543 PROSER3Q2NL68 480 aa12.88□□□□□ -0.35
USP17L28-201ENST00000504543 STK31Q9BXU1 1019 aa12.88□□□□□ -0.35
USP17L28-201ENST00000504543 CHMP4BQ9H444 224 aaKnown RBP12.88□□□□□ -0.35
USP17L28-201ENST00000504543 PDZRN3Q9UPQ7 1066 aa12.88□□□□□ -0.35
USP17L28-201ENST00000504543 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
USP17L28-201ENST00000504543 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
USP17L28-201ENST00000504543 DDR1Q08345 913 aa12.87□□□□□ -0.35
USP17L28-201ENST00000504543 TTLL7Q6ZT98 887 aa12.87□□□□□ -0.35
USP17L28-201ENST00000504543 COPS6Q7L5N1 327 aa12.87□□□□□ -0.35
USP17L28-201ENST00000504543 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
USP17L28-201ENST00000504543 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
USP17L28-201ENST00000504543 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
USP17L28-201ENST00000504543 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
USP17L28-201ENST00000504543 TGFB2P61812 414 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 TBC1D9BQ66K14 1250 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 ZNF34Q8IZ26 560 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 XAGE3Q8WTP9 111 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 SETDB2Q96T68 719 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 SYT17Q9BSW7 474 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 PTPRCP08575 1304 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 AFDNP55196 1824 aaKnown RBP12.86□□□□□ -0.35
USP17L28-201ENST00000504543 SERPINB2P05120 415 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 TRIM28Q13263 835 aaKnown RBP12.86□□□□□ -0.35
USP17L28-201ENST00000504543 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
USP17L28-201ENST00000504543 FHDC1Q9C0D6 1143 aaPredicted RBP12.86□□□□□ -0.35
USP17L28-201ENST00000504543 RBM19Q9Y4C8 960 aaKnown RBP12.86□□□□□ -0.35
USP17L28-201ENST00000504543 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
USP17L28-201ENST00000504543 ANKRD36CQ5JPF3 1778 aa12.85□□□□□ -0.35
USP17L28-201ENST00000504543 RIC1Q4ADV7 1423 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms