RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 MAP3K15Q6ZN16 1313 aa23.28■■□□□ 1.32
NFKB1-204ENST00000504044 GTF2E1P29083 439 aaPredicted RBP23.27■■□□□ 1.32
NFKB1-204ENST00000504044 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
NFKB1-204ENST00000504044 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
NFKB1-204ENST00000504044 PRR5LQ6MZQ0 368 aa23.27■■□□□ 1.32
NFKB1-204ENST00000504044 C2CD5Q86YS7 1000 aa23.27■■□□□ 1.32
NFKB1-204ENST00000504044 KCNA3P22001 575 aa23.26■■□□□ 1.31
NFKB1-204ENST00000504044 CHRNA5P30532 468 aa23.26■■□□□ 1.31
NFKB1-204ENST00000504044 CCDC27Q2M243 656 aa23.26■■□□□ 1.31
NFKB1-204ENST00000504044 NYXQ9GZU5 481 aa23.26■■□□□ 1.31
NFKB1-204ENST00000504044 HDGFL1Q5TGJ6 251 aa23.25■■□□□ 1.31
NFKB1-204ENST00000504044 ARHGAP27Q6ZUM4 889 aa23.25■■□□□ 1.31
NFKB1-204ENST00000504044 MBIPQ9NS73 344 aa23.25■■□□□ 1.31
NFKB1-204ENST00000504044 TTLL6Q8N841 843 aa23.24■■□□□ 1.31
NFKB1-204ENST00000504044 ZNF784Q8NCA9 323 aaPredicted RBP23.24■■□□□ 1.31
NFKB1-204ENST00000504044 CHD4Q14839 1912 aa23.23■■□□□ 1.31
NFKB1-204ENST00000504044 NRXN2Q9P2S2 1712 aa23.23■■□□□ 1.31
NFKB1-204ENST00000504044 DDX21Q9NR30 783 aaKnown RBP eCLIP23.23■■□□□ 1.31
NFKB1-204ENST00000504044 BCORQ6W2J9 1755 aa23.22■■□□□ 1.31
NFKB1-204ENST00000504044 ZNF853P0CG23 659 aa23.22■■□□□ 1.31
NFKB1-204ENST00000504044 HSP90AB3PQ58FF7 597 aa23.22■■□□□ 1.31
NFKB1-204ENST00000504044 ZBTB3Q9H5J0 574 aa23.22■■□□□ 1.31
NFKB1-204ENST00000504044 DBF4Q9UBU7 674 aaPredicted RBP23.22■■□□□ 1.31
NFKB1-204ENST00000504044 HLFQ16534 295 aa23.21■■□□□ 1.31
NFKB1-204ENST00000504044 DUSP27Q5VZP5 1158 aa23.21■■□□□ 1.31
NFKB1-204ENST00000504044 GIGYF2Q6Y7W6 1299 aaKnown RBP23.21■■□□□ 1.31
NFKB1-204ENST00000504044 TTLL7Q6ZT98 887 aa23.21■■□□□ 1.31
NFKB1-204ENST00000504044 NECTIN2Q92692 538 aa23.21■■□□□ 1.31
NFKB1-204ENST00000504044 ZNF622Q969S3 477 aaKnown RBP eCLIP23.21■■□□□ 1.31
NFKB1-204ENST00000504044 N4BP2Q86UW6 1770 aaPredicted RBP23.2■■□□□ 1.3
NFKB1-204ENST00000504044 ATP10DQ9P241 1426 aa23.2■■□□□ 1.3
NFKB1-204ENST00000504044 PARP10Q53GL7 1025 aa23.2■■□□□ 1.3
NFKB1-204ENST00000504044 CNKSR1Q969H4 720 aa23.2■■□□□ 1.3
NFKB1-204ENST00000504044 PDIA6Q15084 440 aa23.19■■□□□ 1.3
NFKB1-204ENST00000504044 PPP1R42Q7Z4L9 355 aa23.19■■□□□ 1.3
NFKB1-204ENST00000504044 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
NFKB1-204ENST00000504044 FAM177BA6PVY3 158 aa23.18■■□□□ 1.3
NFKB1-204ENST00000504044 KRT24Q2M2I5 525 aa23.18■■□□□ 1.3
NFKB1-204ENST00000504044 STYK1Q6J9G0 422 aa23.18■■□□□ 1.3
NFKB1-204ENST00000504044 COPS6Q7L5N1 327 aa23.18■■□□□ 1.3
NFKB1-204ENST00000504044 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
NFKB1-204ENST00000504044 FAM9BQ8IZU0 186 aa23.18■■□□□ 1.3
NFKB1-204ENST00000504044 MASTLQ96GX5 879 aa23.18■■□□□ 1.3
NFKB1-204ENST00000504044 HYPKQ9NX55 129 aa23.18■■□□□ 1.3
NFKB1-204ENST00000504044 IBTKQ9P2D0 1353 aaPredicted RBP23.17■■□□□ 1.3
NFKB1-204ENST00000504044 IL16Q14005 1332 aa23.17■■□□□ 1.3
NFKB1-204ENST00000504044 AIMP1Q12904 312 aaKnown RBP23.17■■□□□ 1.3
NFKB1-204ENST00000504044 CCDC24Q8N4L8 307 aa23.17■■□□□ 1.3
NFKB1-204ENST00000504044 XAGE3Q8WTP9 111 aa23.17■■□□□ 1.3
NFKB1-204ENST00000504044 CHPF2Q9P2E5 772 aa23.17■■□□□ 1.3
NFKB1-204ENST00000504044 AFDNP55196 1824 aaKnown RBP23.17■■□□□ 1.3
NFKB1-204ENST00000504044 SOGA3Q5TF21 947 aa23.16■■□□□ 1.3
NFKB1-204ENST00000504044 ANXA1P04083 346 aa23.15■■□□□ 1.3
NFKB1-204ENST00000504044 GPTP24298 496 aa23.15■■□□□ 1.3
NFKB1-204ENST00000504044 PROSER3Q2NL68 480 aa23.15■■□□□ 1.3
NFKB1-204ENST00000504044 LRP10Q7Z4F1 713 aa23.15■■□□□ 1.3
NFKB1-204ENST00000504044 SRGNP10124 158 aa23.14■■□□□ 1.29
NFKB1-204ENST00000504044 NPR1P16066 1061 aa23.14■■□□□ 1.29
NFKB1-204ENST00000504044 CCDC30Q5VVM6 783 aa23.14■■□□□ 1.29
NFKB1-204ENST00000504044 ZNF34Q8IZ26 560 aa23.14■■□□□ 1.29
NFKB1-204ENST00000504044 RNF123Q5XPI4 1314 aa23.13■■□□□ 1.29
NFKB1-204ENST00000504044 WDR63Q8IWG1 891 aa23.13■■□□□ 1.29
NFKB1-204ENST00000504044 GPBP1L1Q9HC44 474 aaPredicted RBP23.13■■□□□ 1.29
NFKB1-204ENST00000504044 PLBD2Q8NHP8 589 aa23.12■■□□□ 1.29
NFKB1-204ENST00000504044 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
NFKB1-204ENST00000504044 ELL2O00472 640 aaPredicted RBP23.11■■□□□ 1.29
NFKB1-204ENST00000504044 ALDH1B1P30837 517 aa23.11■■□□□ 1.29
NFKB1-204ENST00000504044 GOLGA2Q08379 1002 aa23.11■■□□□ 1.29
NFKB1-204ENST00000504044 ANKRD13DQ6ZTN6 518 aa23.11■■□□□ 1.29
NFKB1-204ENST00000504044 ADCY9O60503 1353 aa23.11■■□□□ 1.29
NFKB1-204ENST00000504044 KLRG2A4D1S0 409 aaPredicted RBP23.1■■□□□ 1.29
NFKB1-204ENST00000504044 TCIRG1Q13488 830 aa23.1■■□□□ 1.29
NFKB1-204ENST00000504044 C9orf131Q5VYM1 1079 aa23.1■■□□□ 1.29
NFKB1-204ENST00000504044 STK31Q9BXU1 1019 aa23.1■■□□□ 1.29
NFKB1-204ENST00000504044 BRCA1P38398 1863 aaKnown RBP23.1■■□□□ 1.29
NFKB1-204ENST00000504044 UBN2Q6ZU65 1347 aa23.09■■□□□ 1.29
NFKB1-204ENST00000504044 DDX58O95786 925 aaKnown RBP23.09■■□□□ 1.29
NFKB1-204ENST00000504044 SUSD4Q5VX71 490 aa23.09■■□□□ 1.29
NFKB1-204ENST00000504044 NUTM1Q86Y26 1132 aa23.09■■□□□ 1.29
NFKB1-204ENST00000504044 RPGRQ92834 1020 aaKnown RBP23.09■■□□□ 1.29
NFKB1-204ENST00000504044 RNF181Q9P0P0 153 aa23.09■■□□□ 1.29
NFKB1-204ENST00000504044 SALL2Q9Y467 1007 aaPredicted RBP23.09■■□□□ 1.29
NFKB1-204ENST00000504044 ARFGEF1Q9Y6D6 1849 aa23.09■■□□□ 1.29
NFKB1-204ENST00000504044 RIC1Q4ADV7 1423 aa23.08■■□□□ 1.29
NFKB1-204ENST00000504044 ERFEQ4G0M1 354 aa23.08■■□□□ 1.29
NFKB1-204ENST00000504044 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
NFKB1-204ENST00000504044 C8orf58Q8NAV2 365 aa23.08■■□□□ 1.29
NFKB1-204ENST00000504044 C21orf2O43822 256 aa23.07■■□□□ 1.28
NFKB1-204ENST00000504044 NTSR2O95665 410 aa23.07■■□□□ 1.28
NFKB1-204ENST00000504044 LMNB1P20700 586 aa23.07■■□□□ 1.28
NFKB1-204ENST00000504044 RIC3Q7Z5B4 369 aa23.07■■□□□ 1.28
NFKB1-204ENST00000504044 TSR2Q969E8 191 aaKnown RBP23.07■■□□□ 1.28
NFKB1-204ENST00000504044 NLRP3Q96P20 1036 aa23.07■■□□□ 1.28
NFKB1-204ENST00000504044 MYH16Q9H6N6 1097 aa23.07■■□□□ 1.28
NFKB1-204ENST00000504044 ZC3H4Q9UPT8 1303 aaKnown RBP23.07■■□□□ 1.28
NFKB1-204ENST00000504044 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
NFKB1-204ENST00000504044 TWISTNBQ3B726 338 aaPredicted RBP23.06■■□□□ 1.28
NFKB1-204ENST00000504044 ZNF219Q9P2Y4 722 aaPredicted RBP23.06■■□□□ 1.28
NFKB1-204ENST00000504044 DLEC1Q9Y238 1755 aa23.06■■□□□ 1.28
NFKB1-204ENST00000504044 ZNF526Q8TF50 670 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms