RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 MIER1Q8N108 512 aa26.78■■□□□ 1.88
PDGFRA-203ENST00000503856 ZNF652Q9Y2D9 606 aa26.78■■□□□ 1.88
PDGFRA-203ENST00000503856 HLFQ16534 295 aa26.77■■□□□ 1.88
PDGFRA-203ENST00000503856 GPR162Q16538 588 aa26.77■■□□□ 1.88
PDGFRA-203ENST00000503856 WDR63Q8IWG1 891 aa26.77■■□□□ 1.88
PDGFRA-203ENST00000503856 C8orf58Q8NAV2 365 aa26.77■■□□□ 1.88
PDGFRA-203ENST00000503856 SETDB2Q96T68 719 aa26.77■■□□□ 1.88
PDGFRA-203ENST00000503856 TGFB2P61812 414 aa26.76■■□□□ 1.87
PDGFRA-203ENST00000503856 KIF6Q6ZMV9 814 aa26.76■■□□□ 1.87
PDGFRA-203ENST00000503856 DDX21Q9NR30 783 aaKnown RBP eCLIP26.76■■□□□ 1.87
PDGFRA-203ENST00000503856 PXDNLA1KZ92 1463 aa26.75■■□□□ 1.87
PDGFRA-203ENST00000503856 CARMIL3Q8ND23 1372 aa26.75■■□□□ 1.87
PDGFRA-203ENST00000503856 MAP3K15Q6ZN16 1313 aa26.75■■□□□ 1.87
PDGFRA-203ENST00000503856 RGL2O15211 777 aa26.75■■□□□ 1.87
PDGFRA-203ENST00000503856 CHPF2Q9P2E5 772 aa26.75■■□□□ 1.87
PDGFRA-203ENST00000503856 BRCA1P38398 1863 aaKnown RBP26.74■■□□□ 1.87
PDGFRA-203ENST00000503856 A0A0G2JLW4 131 aa26.74■■□□□ 1.87
PDGFRA-203ENST00000503856 ERVV-1B6SEH8 477 aa26.74■■□□□ 1.87
PDGFRA-203ENST00000503856 WWC3Q9ULE0 1092 aa26.74■■□□□ 1.87
PDGFRA-203ENST00000503856 CHD4Q14839 1912 aa26.73■■□□□ 1.87
PDGFRA-203ENST00000503856 ANKRD31Q8N7Z5 1873 aa26.73■■□□□ 1.87
PDGFRA-203ENST00000503856 TSPYL6Q8N831 410 aa26.73■■□□□ 1.87
PDGFRA-203ENST00000503856 ZBTB3Q9H5J0 574 aa26.73■■□□□ 1.87
PDGFRA-203ENST00000503856 DPEP1P16444 411 aa26.72■■□□□ 1.87
PDGFRA-203ENST00000503856 YBX3P16989 372 aaKnown RBP eCLIP26.72■■□□□ 1.87
PDGFRA-203ENST00000503856 COPS6Q7L5N1 327 aa26.72■■□□□ 1.87
PDGFRA-203ENST00000503856 DBF4Q9UBU7 674 aaPredicted RBP26.72■■□□□ 1.87
PDGFRA-203ENST00000503856 NIP7Q9Y221 180 aaKnown RBP eCLIP26.72■■□□□ 1.87
PDGFRA-203ENST00000503856 AIMP1Q12904 312 aaKnown RBP26.71■■□□□ 1.87
PDGFRA-203ENST00000503856 XAGE3Q8WTP9 111 aa26.71■■□□□ 1.87
PDGFRA-203ENST00000503856 SPINK5Q9NQ38 1064 aaPredicted RBP26.71■■□□□ 1.87
PDGFRA-203ENST00000503856 PRR5LQ6MZQ0 368 aa26.7■■□□□ 1.86
PDGFRA-203ENST00000503856 CCDC24Q8N4L8 307 aa26.7■■□□□ 1.86
PDGFRA-203ENST00000503856 FANCIQ9NVI1 1328 aa26.69■■□□□ 1.86
PDGFRA-203ENST00000503856 KCNA3P22001 575 aa26.68■■□□□ 1.86
PDGFRA-203ENST00000503856 CHRNA5P30532 468 aa26.68■■□□□ 1.86
PDGFRA-203ENST00000503856 GIGYF2Q6Y7W6 1299 aaKnown RBP26.68■■□□□ 1.86
PDGFRA-203ENST00000503856 ZNF521Q96K83 1311 aa26.67■■□□□ 1.86
PDGFRA-203ENST00000503856 ANKRD36CQ5JPF3 1778 aa26.67■■□□□ 1.86
PDGFRA-203ENST00000503856 NBPF5PQ86XG9 351 aaPredicted RBP26.67■■□□□ 1.86
PDGFRA-203ENST00000503856 CNBD1Q8NA66 436 aa26.67■■□□□ 1.86
PDGFRA-203ENST00000503856 HYPKQ9NX55 129 aa26.67■■□□□ 1.86
PDGFRA-203ENST00000503856 GOLGB1Q14789 3259 aaKnown RBP26.66■■□□□ 1.86
PDGFRA-203ENST00000503856 ATP10DQ9P241 1426 aa26.66■■□□□ 1.86
PDGFRA-203ENST00000503856 FAM177BA6PVY3 158 aa26.66■■□□□ 1.86
PDGFRA-203ENST00000503856 NPHP1O15259 732 aa26.66■■□□□ 1.86
PDGFRA-203ENST00000503856 DLEC1Q9Y238 1755 aa26.66■■□□□ 1.86
PDGFRA-203ENST00000503856 GPTP24298 496 aa26.65■■□□□ 1.86
PDGFRA-203ENST00000503856 TWISTNBQ3B726 338 aaPredicted RBP26.65■■□□□ 1.86
PDGFRA-203ENST00000503856 CCDC30Q5VVM6 783 aa26.65■■□□□ 1.86
PDGFRA-203ENST00000503856 CACNA1FO60840 1977 aa26.65■■□□□ 1.86
PDGFRA-203ENST00000503856 GOLGA2Q08379 1002 aa26.64■■□□□ 1.86
PDGFRA-203ENST00000503856 ZNF34Q8IZ26 560 aa26.64■■□□□ 1.86
PDGFRA-203ENST00000503856 BRIP1Q9BX63 1249 aa26.64■■□□□ 1.86
PDGFRA-203ENST00000503856 CHMP4AQ9BY43 222 aa26.64■■□□□ 1.86
PDGFRA-203ENST00000503856 ARFGEF1Q9Y6D6 1849 aa26.63■■□□□ 1.85
PDGFRA-203ENST00000503856 GRIN3BO60391 1043 aa26.63■■□□□ 1.85
PDGFRA-203ENST00000503856 ST5P78524 1137 aa26.63■■□□□ 1.85
PDGFRA-203ENST00000503856 EXOSC9Q06265 439 aaKnown RBP26.63■■□□□ 1.85
PDGFRA-203ENST00000503856 TPTE2Q6XPS3 522 aa26.63■■□□□ 1.85
PDGFRA-203ENST00000503856 PIM2Q9P1W9 311 aa26.63■■□□□ 1.85
PDGFRA-203ENST00000503856 MYH16Q9H6N6 1097 aa26.62■■□□□ 1.85
PDGFRA-203ENST00000503856 PHAXQ9H814 394 aaKnown RBP26.62■■□□□ 1.85
PDGFRA-203ENST00000503856 BCS1LQ9Y276 419 aa26.62■■□□□ 1.85
PDGFRA-203ENST00000503856 UTRNP46939 3433 aa26.62■■□□□ 1.85
PDGFRA-203ENST00000503856 UBN2Q6ZU65 1347 aa26.62■■□□□ 1.85
PDGFRA-203ENST00000503856 TCERG1O14776 1098 aaKnown RBP26.61■■□□□ 1.85
PDGFRA-203ENST00000503856 ANKRD13DQ6ZTN6 518 aa26.61■■□□□ 1.85
PDGFRA-203ENST00000503856 C2CD5Q86YS7 1000 aa26.61■■□□□ 1.85
PDGFRA-203ENST00000503856 COL11A2P13942 1736 aaPredicted RBP26.61■■□□□ 1.85
PDGFRA-203ENST00000503856 ARFGEF2Q9Y6D5 1785 aa26.61■■□□□ 1.85
PDGFRA-203ENST00000503856 PDE6BP35913 854 aa26.6■■□□□ 1.85
PDGFRA-203ENST00000503856 PLBD2Q8NHP8 589 aa26.6■■□□□ 1.85
PDGFRA-203ENST00000503856 H0YIN7 160 aa26.59■■□□□ 1.85
PDGFRA-203ENST00000503856 SUSD4Q5VX71 490 aa26.59■■□□□ 1.85
PDGFRA-203ENST00000503856 CACNA1SQ13698 1873 aa26.58■■□□□ 1.85
PDGFRA-203ENST00000503856 VAMP4O75379 141 aa26.58■■□□□ 1.85
PDGFRA-203ENST00000503856 GTF2E1P29083 439 aaPredicted RBP26.58■■□□□ 1.85
PDGFRA-203ENST00000503856 TCIRG1Q13488 830 aa26.58■■□□□ 1.85
PDGFRA-203ENST00000503856 HSP90AB3PQ58FF7 597 aa26.58■■□□□ 1.85
PDGFRA-203ENST00000503856 NYXQ9GZU5 481 aa26.58■■□□□ 1.85
PDGFRA-203ENST00000503856 DALRD3Q5D0E6 543 aaKnown RBP26.57■■□□□ 1.84
PDGFRA-203ENST00000503856 NUTM1Q86Y26 1132 aa26.57■■□□□ 1.84
PDGFRA-203ENST00000503856 STK31Q9BXU1 1019 aa26.57■■□□□ 1.84
PDGFRA-203ENST00000503856 PARP10Q53GL7 1025 aa26.56■■□□□ 1.84
PDGFRA-203ENST00000503856 PDZRN3Q9UPQ7 1066 aa26.56■■□□□ 1.84
PDGFRA-203ENST00000503856 PPP1R42Q7Z4L9 355 aa26.55■■□□□ 1.84
PDGFRA-203ENST00000503856 IBTKQ9P2D0 1353 aaPredicted RBP26.55■■□□□ 1.84
PDGFRA-203ENST00000503856 NTSR2O95665 410 aa26.54■■□□□ 1.84
PDGFRA-203ENST00000503856 YY1P25490 414 aa26.54■■□□□ 1.84
PDGFRA-203ENST00000503856 ERFEQ4G0M1 354 aa26.54■■□□□ 1.84
PDGFRA-203ENST00000503856 ZNF622Q969S3 477 aaKnown RBP eCLIP26.54■■□□□ 1.84
PDGFRA-203ENST00000503856 TNRC6CQ9HCJ0 1690 aaKnown RBP26.54■■□□□ 1.84
PDGFRA-203ENST00000503856 E9PSI1 815 aa26.53■■□□□ 1.84
PDGFRA-203ENST00000503856 SLC4A2P04920 1241 aa26.53■■□□□ 1.84
PDGFRA-203ENST00000503856 RIC3Q7Z5B4 369 aa26.53■■□□□ 1.84
PDGFRA-203ENST00000503856 NLRP10Q86W26 655 aa26.53■■□□□ 1.84
PDGFRA-203ENST00000503856 TTLL6Q8N841 843 aa26.53■■□□□ 1.84
PDGFRA-203ENST00000503856 ABCC12Q96J65 1359 aa26.53■■□□□ 1.84
PDGFRA-203ENST00000503856 SRGNP10124 158 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms