RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 BRIP1Q9BX63 1249 aa28.7■■■□□ 2.18
CCHCR1-217ENST00000503420 NIP7Q9Y221 180 aaKnown RBP eCLIP28.7■■■□□ 2.18
CCHCR1-217ENST00000503420 ERVV-1B6SEH8 477 aa28.69■■■□□ 2.18
CCHCR1-217ENST00000503420 PRR5LQ6MZQ0 368 aa28.69■■■□□ 2.18
CCHCR1-217ENST00000503420 SCN7AQ01118 1682 aa28.69■■■□□ 2.18
CCHCR1-217ENST00000503420 LAMB4A4D0S4 1761 aa28.68■■■□□ 2.18
CCHCR1-217ENST00000503420 TPTE2Q6XPS3 522 aa28.68■■■□□ 2.18
CCHCR1-217ENST00000503420 AFDNP55196 1824 aaKnown RBP28.67■■■□□ 2.18
CCHCR1-217ENST00000503420 HLFQ16534 295 aa28.67■■■□□ 2.18
CCHCR1-217ENST00000503420 CCDC24Q8N4L8 307 aa28.67■■■□□ 2.18
CCHCR1-217ENST00000503420 MAP3K15Q6ZN16 1313 aa28.67■■■□□ 2.18
CCHCR1-217ENST00000503420 GTF2E1P29083 439 aaPredicted RBP28.66■■■□□ 2.18
CCHCR1-217ENST00000503420 GNAI1P63096 354 aa28.66■■■□□ 2.18
CCHCR1-217ENST00000503420 TTLL7Q6ZT98 887 aa28.66■■■□□ 2.18
CCHCR1-217ENST00000503420 NECTIN2Q92692 538 aa28.66■■■□□ 2.18
CCHCR1-217ENST00000503420 TTLL6Q8N841 843 aa28.65■■■□□ 2.18
CCHCR1-217ENST00000503420 ZNF622Q969S3 477 aaKnown RBP eCLIP28.65■■■□□ 2.18
CCHCR1-217ENST00000503420 IFT57Q9NWB7 429 aa28.65■■■□□ 2.18
CCHCR1-217ENST00000503420 KIAA1551Q9HCM1 1747 aa28.65■■■□□ 2.18
CCHCR1-217ENST00000503420 NRXN2Q9P2S2 1712 aa28.64■■■□□ 2.18
CCHCR1-217ENST00000503420 ZBTB3Q9H5J0 574 aa28.64■■■□□ 2.18
CCHCR1-217ENST00000503420 FAM177BA6PVY3 158 aa28.63■■■□□ 2.17
CCHCR1-217ENST00000503420 MBIPQ9NS73 344 aa28.63■■■□□ 2.17
CCHCR1-217ENST00000503420 HOXB7P09629 217 aa28.62■■■□□ 2.17
CCHCR1-217ENST00000503420 KRT24Q2M2I5 525 aa28.62■■■□□ 2.17
CCHCR1-217ENST00000503420 BCORQ6W2J9 1755 aa28.61■■■□□ 2.17
CCHCR1-217ENST00000503420 PDIA6Q15084 440 aa28.61■■■□□ 2.17
CCHCR1-217ENST00000503420 HDGFL1Q5TGJ6 251 aa28.61■■■□□ 2.17
CCHCR1-217ENST00000503420 NYXQ9GZU5 481 aa28.61■■■□□ 2.17
CCHCR1-217ENST00000503420 ZNF853P0CG23 659 aa28.6■■■□□ 2.17
CCHCR1-217ENST00000503420 DDX21Q9NR30 783 aaKnown RBP eCLIP28.6■■■□□ 2.17
CCHCR1-217ENST00000503420 ANXA1P04083 346 aa28.59■■■□□ 2.17
CCHCR1-217ENST00000503420 DUSP27Q5VZP5 1158 aa28.59■■■□□ 2.17
CCHCR1-217ENST00000503420 AIMP1Q12904 312 aaKnown RBP28.58■■■□□ 2.17
CCHCR1-217ENST00000503420 PROSER3Q2NL68 480 aa28.58■■■□□ 2.17
CCHCR1-217ENST00000503420 GPTP24298 496 aa28.57■■■□□ 2.16
CCHCR1-217ENST00000503420 CCDC27Q2M243 656 aa28.57■■■□□ 2.16
CCHCR1-217ENST00000503420 GIGYF2Q6Y7W6 1299 aaKnown RBP28.57■■■□□ 2.16
CCHCR1-217ENST00000503420 COPS6Q7L5N1 327 aa28.57■■■□□ 2.16
CCHCR1-217ENST00000503420 CNKSR1Q969H4 720 aa28.57■■■□□ 2.16
CCHCR1-217ENST00000503420 SENP3-EIF4A1A0A087X0R7 540 aa28.56■■■□□ 2.16
CCHCR1-217ENST00000503420 XAGE3Q8WTP9 111 aa28.56■■■□□ 2.16
CCHCR1-217ENST00000503420 MASTLQ96GX5 879 aa28.56■■■□□ 2.16
CCHCR1-217ENST00000503420 CHMP4AQ9BY43 222 aa28.56■■■□□ 2.16
CCHCR1-217ENST00000503420 DBF4Q9UBU7 674 aaPredicted RBP28.56■■■□□ 2.16
CCHCR1-217ENST00000503420 BRCA1P38398 1863 aaKnown RBP28.55■■■□□ 2.16
CCHCR1-217ENST00000503420 STYK1Q6J9G0 422 aa28.55■■■□□ 2.16
CCHCR1-217ENST00000503420 CHPF2Q9P2E5 772 aa28.55■■■□□ 2.16
CCHCR1-217ENST00000503420 ATP10DQ9P241 1426 aa28.54■■■□□ 2.16
CCHCR1-217ENST00000503420 HSP90AB3PQ58FF7 597 aa28.54■■■□□ 2.16
CCHCR1-217ENST00000503420 LRP10Q7Z4F1 713 aa28.54■■■□□ 2.16
CCHCR1-217ENST00000503420 FAM9BQ8IZU0 186 aa28.54■■■□□ 2.16
CCHCR1-217ENST00000503420 GPBP1L1Q9HC44 474 aaPredicted RBP28.54■■■□□ 2.16
CCHCR1-217ENST00000503420 SRGNP10124 158 aa28.53■■■□□ 2.16
CCHCR1-217ENST00000503420 NCBP3Q53F19 620 aaKnown RBP28.53■■■□□ 2.16
CCHCR1-217ENST00000503420 PARP10Q53GL7 1025 aa28.53■■■□□ 2.16
CCHCR1-217ENST00000503420 PPP1R42Q7Z4L9 355 aa28.53■■■□□ 2.16
CCHCR1-217ENST00000503420 WWC1Q8IX03 1113 aa28.53■■■□□ 2.16
CCHCR1-217ENST00000503420 ELL2O00472 640 aaPredicted RBP28.52■■■□□ 2.16
CCHCR1-217ENST00000503420 C9orf131Q5VYM1 1079 aa28.52■■■□□ 2.16
CCHCR1-217ENST00000503420 ZNF34Q8IZ26 560 aa28.52■■■□□ 2.16
CCHCR1-217ENST00000503420 ZNF526Q8TF50 670 aaPredicted RBP28.52■■■□□ 2.16
CCHCR1-217ENST00000503420 HYPKQ9NX55 129 aa28.52■■■□□ 2.16
CCHCR1-217ENST00000503420 ARFGEF1Q9Y6D6 1849 aa28.52■■■□□ 2.16
CCHCR1-217ENST00000503420 NPR1P16066 1061 aa28.51■■■□□ 2.15
CCHCR1-217ENST00000503420 ZNF219Q9P2Y4 722 aaPredicted RBP28.51■■■□□ 2.15
CCHCR1-217ENST00000503420 SUSD4Q5VX71 490 aa28.5■■■□□ 2.15
CCHCR1-217ENST00000503420 NUTM1Q86Y26 1132 aa28.5■■■□□ 2.15
CCHCR1-217ENST00000503420 SALL2Q9Y467 1007 aaPredicted RBP28.5■■■□□ 2.15
CCHCR1-217ENST00000503420 ADCY9O60503 1353 aa28.5■■■□□ 2.15
CCHCR1-217ENST00000503420 C21orf2O43822 256 aa28.49■■■□□ 2.15
CCHCR1-217ENST00000503420 RNF181Q9P0P0 153 aa28.49■■■□□ 2.15
CCHCR1-217ENST00000503420 ERFEQ4G0M1 354 aa28.48■■■□□ 2.15
CCHCR1-217ENST00000503420 UTP14AQ9BVJ6 771 aaKnown RBP28.48■■■□□ 2.15
CCHCR1-217ENST00000503420 ANKRD31Q8N7Z5 1873 aa28.48■■■□□ 2.15
CCHCR1-217ENST00000503420 NUP98P52948 1817 aa28.48■■■□□ 2.15
CCHCR1-217ENST00000503420 UBN2Q6ZU65 1347 aa28.47■■■□□ 2.15
CCHCR1-217ENST00000503420 KLRG2A4D1S0 409 aaPredicted RBP28.47■■■□□ 2.15
CCHCR1-217ENST00000503420 SOGA3Q5TF21 947 aa28.47■■■□□ 2.15
CCHCR1-217ENST00000503420 ANKRD13DQ6ZTN6 518 aa28.47■■■□□ 2.15
CCHCR1-217ENST00000503420 C8orf58Q8NAV2 365 aa28.47■■■□□ 2.15
CCHCR1-217ENST00000503420 IL16Q14005 1332 aa28.46■■■□□ 2.15
CCHCR1-217ENST00000503420 ALDH1B1P30837 517 aa28.46■■■□□ 2.15
CCHCR1-217ENST00000503420 TCIRG1Q13488 830 aa28.46■■■□□ 2.15
CCHCR1-217ENST00000503420 PRPF40BQ6NWY9 871 aaKnown RBP28.46■■■□□ 2.15
CCHCR1-217ENST00000503420 PLBD2Q8NHP8 589 aa28.46■■■□□ 2.15
CCHCR1-217ENST00000503420 IBTKQ9P2D0 1353 aaPredicted RBP28.46■■■□□ 2.15
CCHCR1-217ENST00000503420 CCDC30Q5VVM6 783 aa28.45■■■□□ 2.14
CCHCR1-217ENST00000503420 TSR2Q969E8 191 aaKnown RBP28.45■■■□□ 2.14
CCHCR1-217ENST00000503420 DLEC1Q9Y238 1755 aa28.45■■■□□ 2.14
CCHCR1-217ENST00000503420 LMNB1P20700 586 aa28.44■■■□□ 2.14
CCHCR1-217ENST00000503420 RASSF7Q02833 373 aa28.44■■■□□ 2.14
CCHCR1-217ENST00000503420 RPGRQ92834 1020 aaKnown RBP28.44■■■□□ 2.14
CCHCR1-217ENST00000503420 NTSR2O95665 410 aa28.43■■■□□ 2.14
CCHCR1-217ENST00000503420 WDR63Q8IWG1 891 aa28.43■■■□□ 2.14
CCHCR1-217ENST00000503420 GOLGA2Q08379 1002 aa28.42■■■□□ 2.14
CCHCR1-217ENST00000503420 RIC3Q7Z5B4 369 aa28.41■■■□□ 2.14
CCHCR1-217ENST00000503420 NLRP3Q96P20 1036 aa28.41■■■□□ 2.14
CCHCR1-217ENST00000503420 ABCC12Q96J65 1359 aa28.4■■■□□ 2.14
CCHCR1-217ENST00000503420 NLRP10Q86W26 655 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms