RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 ANO2Q9NQ90 1003 aa8.72□□□□□ -1.01
LYSMD3-203ENST00000500869 TSGA10IPQ3SY00 556 aa8.72□□□□□ -1.01
LYSMD3-203ENST00000500869 ZSCAN31Q96LW9 406 aaPredicted RBP8.72□□□□□ -1.01
LYSMD3-203ENST00000500869 ZSWIM6Q9HCJ5 1215 aa8.72□□□□□ -1.01
LYSMD3-203ENST00000500869 NSFL1CQ9UNZ2 370 aaKnown RBP8.72□□□□□ -1.01
LYSMD3-203ENST00000500869 ZKSCAN5Q9Y2L8 839 aa8.72□□□□□ -1.01
LYSMD3-203ENST00000500869 SH2B1Q9NRF2 756 aaPredicted RBP8.72□□□□□ -1.01
LYSMD3-203ENST00000500869 CHPF2Q9P2E5 772 aa8.72□□□□□ -1.01
LYSMD3-203ENST00000500869 LAMA4Q16363 1823 aa8.71□□□□□ -1.01
LYSMD3-203ENST00000500869 HIP1O00291 1037 aa8.71□□□□□ -1.01
LYSMD3-203ENST00000500869 KSR2Q6VAB6 950 aa8.71□□□□□ -1.01
LYSMD3-203ENST00000500869 CCDC39Q9UFE4 941 aa8.71□□□□□ -1.01
LYSMD3-203ENST00000500869 LIMCH1Q9UPQ0 1083 aa8.71□□□□□ -1.01
LYSMD3-203ENST00000500869 SHANK3Q9BYB0 1731 aa8.71□□□□□ -1.01
LYSMD3-203ENST00000500869 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.01
LYSMD3-203ENST00000500869 NUTM2FA1L443 756 aa8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 GIGYF1O75420 1035 aaPredicted RBP8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 NBPF7P0C2Y1 421 aaPredicted RBP8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 ZSCAN22P10073 491 aaPredicted RBP8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 TSHZ3Q63HK5 1081 aa8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 RUFY3Q7L099 469 aa8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 RUFY2Q8WXA3 655 aa8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 FUCA2Q9BTY2 467 aa8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 NECTIN1Q15223 517 aa8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 TSPY26PQ9H489 355 aa8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 HYPKQ9NX55 129 aa8.71□□□□□ -1.02
LYSMD3-203ENST00000500869 APBB1O00213 710 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 SRGAP3O43295 1099 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 EVI5LQ96CN4 794 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 RBM27Q9P2N5 1060 aaKnown RBP8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 SURF6O75683 361 aaKnown RBP8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 RILPL2Q969X0 211 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 LGR6Q9HBX8 967 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 ECHDC1Q9NTX5 307 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 CSPP1Q1MSJ5 1256 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 CCDC183Q5T5S1 534 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 LINS1Q8NG48 757 aa8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.7□□□□□ -1.02
LYSMD3-203ENST00000500869 C1orf167Q5SNV9 1468 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 ELP1O95163 1332 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 PI4KAP2A4QPH2 592 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 AK2P54819 239 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 UBE2HP62256 183 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 PDIA6Q15084 440 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 PI4KAP1Q8N8J0 262 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 F13A1P00488 732 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 NUTM1Q86Y26 1132 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 RASEFQ8IZ41 740 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 KAZALD1Q96I82 304 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 ABCA3Q99758 1704 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 COL22A1Q8NFW1 1626 aaPredicted RBP8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 ST3GAL1Q11201 340 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 USPL1Q5W0Q7 1092 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 LRP10Q7Z4F1 713 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 MAP4K1Q92918 833 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 GPATCH3Q96I76 525 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 DDX21Q9NR30 783 aaKnown RBP eCLIP8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 ATP6V1DQ9Y5K8 247 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 STRCP1A6NGW2 1772 aa8.69□□□□□ -1.02
LYSMD3-203ENST00000500869 SYCE3A1L190 88 aa8.68□□□□□ -1.02
LYSMD3-203ENST00000500869 USP48Q86UV5 1035 aa8.68□□□□□ -1.02
LYSMD3-203ENST00000500869 IL1RAPL2Q9NP60 686 aa8.68□□□□□ -1.02
LYSMD3-203ENST00000500869 ZNF530Q6P9A1 599 aaPredicted RBP8.68□□□□□ -1.02
LYSMD3-203ENST00000500869 ANKLE2Q86XL3 938 aa8.68□□□□□ -1.02
LYSMD3-203ENST00000500869 STX6O43752 255 aa8.68□□□□□ -1.02
LYSMD3-203ENST00000500869 MSNP26038 577 aaKnown RBP8.68□□□□□ -1.02
LYSMD3-203ENST00000500869 SOX12O15370 315 aa8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 KCNQ3O43525 872 aa8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 CLASRPQ8N2M8 674 aaKnown RBP8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 NAP1L5Q96NT1 182 aaPredicted RBP8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 SYT1P21579 422 aa8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 HMG20BQ9P0W2 317 aa8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 MTMR6Q9Y217 621 aa8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 GRM8O00222 908 aa8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 RABL6Q3YEC7 729 aaPredicted RBP8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 ARXQ96QS3 562 aa8.67□□□□□ -1.02
LYSMD3-203ENST00000500869 SASH1O94885 1247 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 TEFQ10587 303 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 UPF3BQ9BZI7 483 aaKnown RBP8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 MAP3K2Q9Y2U5 619 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 MEGF6O75095 1541 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 ERBB3P21860 1342 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 GADD45BO75293 160 aaPredicted RBP8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 GCP02774 474 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 KCPQ6ZWJ8 1503 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 XIRP1Q702N8 1843 aaKnown RBP8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 PTH1RQ03431 593 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 COPRSQ9NQ92 184 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 CPDO75976 1380 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 PALLDQ8WX93 1383 aa8.66□□□□□ -1.02
LYSMD3-203ENST00000500869 DDX58O95786 925 aaKnown RBP8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 RFX5P48382 616 aaPredicted RBP8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 ANKRD1Q15327 319 aa8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
LYSMD3-203ENST00000500869 SUCLG2Q96I99 432 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms