RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 SETDB2Q96T68 719 aa22.28■■□□□ 1.16
AP004609.1-201ENST00000498872 RNF181Q9P0P0 153 aa22.28■■□□□ 1.16
AP004609.1-201ENST00000498872 KIF3CO14782 793 aa22.28■■□□□ 1.16
AP004609.1-201ENST00000498872 NPHP1O15259 732 aa22.28■■□□□ 1.16
AP004609.1-201ENST00000498872 RASSF7Q02833 373 aa22.28■■□□□ 1.16
AP004609.1-201ENST00000498872 CCDC88AQ3V6T2 1871 aa22.27■■□□□ 1.16
AP004609.1-201ENST00000498872 TTLL6Q8N841 843 aa22.27■■□□□ 1.16
AP004609.1-201ENST00000498872 ZNF622Q969S3 477 aaKnown RBP eCLIP22.26■■□□□ 1.15
AP004609.1-201ENST00000498872 NMRK2Q9NPI5 230 aa22.26■■□□□ 1.15
AP004609.1-201ENST00000498872 CNBD1Q8NA66 436 aa22.25■■□□□ 1.15
AP004609.1-201ENST00000498872 ZNF219Q9P2Y4 722 aaPredicted RBP22.25■■□□□ 1.15
AP004609.1-201ENST00000498872 BRIP1Q9BX63 1249 aa22.24■■□□□ 1.15
AP004609.1-201ENST00000498872 PNNQ9H307 717 aaKnown RBP22.24■■□□□ 1.15
AP004609.1-201ENST00000498872 PDE6BP35913 854 aa22.24■■□□□ 1.15
AP004609.1-201ENST00000498872 NGEFQ8N5V2 710 aa22.24■■□□□ 1.15
AP004609.1-201ENST00000498872 PRELPP51888 382 aa22.22■■□□□ 1.15
AP004609.1-201ENST00000498872 EIF4A1P60842 406 aaKnown RBP22.22■■□□□ 1.15
AP004609.1-201ENST00000498872 FAM177BA6PVY3 158 aa22.21■■□□□ 1.15
AP004609.1-201ENST00000498872 RIPK4P57078 832 aa22.21■■□□□ 1.15
AP004609.1-201ENST00000498872 ST5P78524 1137 aa22.21■■□□□ 1.15
AP004609.1-201ENST00000498872 ZNF652Q9Y2D9 606 aa22.21■■□□□ 1.15
AP004609.1-201ENST00000498872 CLEC4GQ6UXB4 293 aa22.2■■□□□ 1.15
AP004609.1-201ENST00000498872 NBPF5PQ86XG9 351 aaPredicted RBP22.2■■□□□ 1.15
AP004609.1-201ENST00000498872 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.15
AP004609.1-201ENST00000498872 TIAM2Q8IVF5 1701 aa22.2■■□□□ 1.14
AP004609.1-201ENST00000498872 C21orf2O43822 256 aa22.2■■□□□ 1.14
AP004609.1-201ENST00000498872 HLFQ16534 295 aa22.2■■□□□ 1.14
AP004609.1-201ENST00000498872 NIP7Q9Y221 180 aaKnown RBP eCLIP22.2■■□□□ 1.14
AP004609.1-201ENST00000498872 RRP7AQ9Y3A4 280 aaKnown RBP22.2■■□□□ 1.14
AP004609.1-201ENST00000498872 SLX4Q8IY92 1834 aa22.19■■□□□ 1.14
AP004609.1-201ENST00000498872 MYL6BP14649 208 aa22.19■■□□□ 1.14
AP004609.1-201ENST00000498872 NUP98P52948 1817 aa22.18■■□□□ 1.14
AP004609.1-201ENST00000498872 NFKBIEO00221 500 aa22.18■■□□□ 1.14
AP004609.1-201ENST00000498872 NEUROD2Q15784 382 aa22.18■■□□□ 1.14
AP004609.1-201ENST00000498872 TSPYL4Q9UJ04 414 aa22.18■■□□□ 1.14
AP004609.1-201ENST00000498872 HSPA6P17066 643 aa22.17■■□□□ 1.14
AP004609.1-201ENST00000498872 TMPOP42166 694 aaKnown RBP22.17■■□□□ 1.14
AP004609.1-201ENST00000498872 FER1L6Q2WGJ9 1857 aa22.17■■□□□ 1.14
AP004609.1-201ENST00000498872 LMNB1P20700 586 aa22.17■■□□□ 1.14
AP004609.1-201ENST00000498872 KDM2BQ8NHM5 1336 aa22.16■■□□□ 1.14
AP004609.1-201ENST00000498872 TOMM70O94826 608 aa22.16■■□□□ 1.14
AP004609.1-201ENST00000498872 SRGNP10124 158 aa22.16■■□□□ 1.14
AP004609.1-201ENST00000498872 WDR43Q15061 677 aaKnown RBP eCLIP22.16■■□□□ 1.14
AP004609.1-201ENST00000498872 PDZRN3Q9UPQ7 1066 aa22.16■■□□□ 1.14
AP004609.1-201ENST00000498872 ARFGEF2Q9Y6D5 1785 aa22.16■■□□□ 1.14
AP004609.1-201ENST00000498872 TNRC6CQ9HCJ0 1690 aaKnown RBP22.15■■□□□ 1.14
AP004609.1-201ENST00000498872 TTLL7Q6ZT98 887 aa22.15■■□□□ 1.14
AP004609.1-201ENST00000498872 RRAGCQ9HB90 399 aa22.15■■□□□ 1.14
AP004609.1-201ENST00000498872 PRPF40BQ6NWY9 871 aaKnown RBP22.14■■□□□ 1.14
AP004609.1-201ENST00000498872 TPTE2Q6XPS3 522 aa22.13■■□□□ 1.13
AP004609.1-201ENST00000498872 MASTLQ96GX5 879 aa22.13■■□□□ 1.13
AP004609.1-201ENST00000498872 ZBTB3Q9H5J0 574 aa22.13■■□□□ 1.13
AP004609.1-201ENST00000498872 ADAMTS8Q9UP79 889 aa22.13■■□□□ 1.13
AP004609.1-201ENST00000498872 STYK1Q6J9G0 422 aa22.13■■□□□ 1.13
AP004609.1-201ENST00000498872 C16orf71Q8IYS4 520 aaPredicted RBP22.13■■□□□ 1.13
AP004609.1-201ENST00000498872 EIF2S2P20042 333 aaKnown RBP22.12■■□□□ 1.13
AP004609.1-201ENST00000498872 KIF6Q6ZMV9 814 aa22.12■■□□□ 1.13
AP004609.1-201ENST00000498872 CNKSR1Q969H4 720 aa22.12■■□□□ 1.13
AP004609.1-201ENST00000498872 MAP3K15Q6ZN16 1313 aa22.11■■□□□ 1.13
AP004609.1-201ENST00000498872 DICER1Q9UPY3 1922 aaKnown RBP22.11■■□□□ 1.13
AP004609.1-201ENST00000498872 GTF2E1P29083 439 aaPredicted RBP22.11■■□□□ 1.13
AP004609.1-201ENST00000498872 GPTP24298 496 aa22.1■■□□□ 1.13
AP004609.1-201ENST00000498872 LMOD3Q0VAK6 560 aa22.1■■□□□ 1.13
AP004609.1-201ENST00000498872 NUTM1Q86Y26 1132 aa22.1■■□□□ 1.13
AP004609.1-201ENST00000498872 RGL2O15211 777 aa22.09■■□□□ 1.13
AP004609.1-201ENST00000498872 ANXA1P04083 346 aa22.09■■□□□ 1.13
AP004609.1-201ENST00000498872 NECTIN2Q92692 538 aa22.09■■□□□ 1.13
AP004609.1-201ENST00000498872 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
AP004609.1-201ENST00000498872 LAS1LQ9Y4W2 734 aaKnown RBP22.09■■□□□ 1.13
AP004609.1-201ENST00000498872 ERVV-1B6SEH8 477 aa22.09■■□□□ 1.13
AP004609.1-201ENST00000498872 ERICH6BQ5W0A0 696 aa22.09■■□□□ 1.13
AP004609.1-201ENST00000498872 ZC3H4Q9UPT8 1303 aaKnown RBP22.08■■□□□ 1.13
AP004609.1-201ENST00000498872 NPR1P16066 1061 aa22.08■■□□□ 1.13
AP004609.1-201ENST00000498872 TAOK3Q9H2K8 898 aa22.08■■□□□ 1.13
AP004609.1-201ENST00000498872 ABCC12Q96J65 1359 aa22.07■■□□□ 1.12
AP004609.1-201ENST00000498872 GLTPD2A6NH11 291 aa22.07■■□□□ 1.12
AP004609.1-201ENST00000498872 KRT24Q2M2I5 525 aa22.07■■□□□ 1.12
AP004609.1-201ENST00000498872 PROSER3Q2NL68 480 aa22.07■■□□□ 1.12
AP004609.1-201ENST00000498872 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
AP004609.1-201ENST00000498872 OLFM4Q6UX06 510 aa22.07■■□□□ 1.12
AP004609.1-201ENST00000498872 TRIM35Q9UPQ4 493 aa22.07■■□□□ 1.12
AP004609.1-201ENST00000498872 UBN2Q6ZU65 1347 aa22.07■■□□□ 1.12
AP004609.1-201ENST00000498872 PDIA6Q15084 440 aa22.06■■□□□ 1.12
AP004609.1-201ENST00000498872 RBM46Q8TBY0 533 aaKnown RBP22.06■■□□□ 1.12
AP004609.1-201ENST00000498872 KLRG2A4D1S0 409 aaPredicted RBP22.06■■□□□ 1.12
AP004609.1-201ENST00000498872 ERBB4Q15303 1308 aa22.05■■□□□ 1.12
AP004609.1-201ENST00000498872 RNF123Q5XPI4 1314 aa22.05■■□□□ 1.12
AP004609.1-201ENST00000498872 SUSD4Q5VX71 490 aa22.04■■□□□ 1.12
AP004609.1-201ENST00000498872 LRP10Q7Z4F1 713 aa22.04■■□□□ 1.12
AP004609.1-201ENST00000498872 C7orf43Q8WVR3 580 aa22.04■■□□□ 1.12
AP004609.1-201ENST00000498872 NYXQ9GZU5 481 aa22.04■■□□□ 1.12
AP004609.1-201ENST00000498872 BABAM1Q9NWV8 329 aa22.04■■□□□ 1.12
AP004609.1-201ENST00000498872 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
AP004609.1-201ENST00000498872 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
AP004609.1-201ENST00000498872 WDR90Q96KV7 1748 aa22.03■■□□□ 1.12
AP004609.1-201ENST00000498872 LTBP3Q9NS15 1303 aa22.03■■□□□ 1.12
AP004609.1-201ENST00000498872 APLP1P51693 650 aa22.02■■□□□ 1.12
AP004609.1-201ENST00000498872 IRX6P78412 446 aaPredicted RBP22.02■■□□□ 1.12
AP004609.1-201ENST00000498872 CCDC93Q567U6 631 aa22.02■■□□□ 1.12
AP004609.1-201ENST00000498872 SOGA3Q5TF21 947 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms