RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 SLC16A10Q8TF71 515 aa14.24□□□□□ -0.13
CDK11A-222ENST00000498810 LARP6Q9BRS8 491 aaKnown RBP14.24□□□□□ -0.13
CDK11A-222ENST00000498810 TBC1D12O60347 775 aa14.23□□□□□ -0.13
CDK11A-222ENST00000498810 U2AF1L5P0DN76 240 aaPredicted RBP14.23□□□□□ -0.13
CDK11A-222ENST00000498810 ZEB1P37275 1124 aaPredicted RBP14.23□□□□□ -0.13
CDK11A-222ENST00000498810 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDK11A-222ENST00000498810 FLAD1Q8NFF5 587 aa14.23□□□□□ -0.13
CDK11A-222ENST00000498810 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
CDK11A-222ENST00000498810 ATG3Q9NT62 314 aa14.22□□□□□ -0.13
CDK11A-222ENST00000498810 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
CDK11A-222ENST00000498810 MRC1P22897 1456 aa14.21□□□□□ -0.13
CDK11A-222ENST00000498810 GNPATO15228 680 aa14.21□□□□□ -0.13
CDK11A-222ENST00000498810 PTCD1O75127 700 aaKnown RBP14.21□□□□□ -0.13
CDK11A-222ENST00000498810 DDX10Q13206 875 aaKnown RBP14.21□□□□□ -0.13
CDK11A-222ENST00000498810 MTHFSDQ2M296 383 aaKnown RBP14.21□□□□□ -0.13
CDK11A-222ENST00000498810 ARXQ96QS3 562 aa14.21□□□□□ -0.13
CDK11A-222ENST00000498810 TJP1Q07157 1748 aa14.21□□□□□ -0.14
CDK11A-222ENST00000498810 COL24A1Q17RW2 1714 aa14.21□□□□□ -0.14
CDK11A-222ENST00000498810 PRKAR2BP31323 418 aa14.2□□□□□ -0.14
CDK11A-222ENST00000498810 PTGER2P43116 358 aa14.2□□□□□ -0.14
CDK11A-222ENST00000498810 MSL1Q68DK7 614 aa14.2□□□□□ -0.14
CDK11A-222ENST00000498810 NFATC2IPQ8NCF5 419 aa14.2□□□□□ -0.14
CDK11A-222ENST00000498810 LINC00116Q8NCU8 138 aa14.2□□□□□ -0.14
CDK11A-222ENST00000498810 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
CDK11A-222ENST00000498810 ADAMTS7Q9UKP4 1686 aa14.2□□□□□ -0.14
CDK11A-222ENST00000498810 RNMTO43148 476 aaKnown RBP14.19□□□□□ -0.14
CDK11A-222ENST00000498810 TEFQ10587 303 aa14.19□□□□□ -0.14
CDK11A-222ENST00000498810 COL23A1Q86Y22 540 aaPredicted RBP14.19□□□□□ -0.14
CDK11A-222ENST00000498810 TTC5Q8N0Z6 440 aa14.19□□□□□ -0.14
CDK11A-222ENST00000498810 FHDC1Q9C0D6 1143 aaPredicted RBP14.19□□□□□ -0.14
CDK11A-222ENST00000498810 SLC52A2Q9HAB3 445 aa14.19□□□□□ -0.14
CDK11A-222ENST00000498810 SIPA1L3O60292 1781 aaPredicted RBP14.19□□□□□ -0.14
CDK11A-222ENST00000498810 C4AP0C0L4 1744 aa14.18□□□□□ -0.14
CDK11A-222ENST00000498810 DLG5Q8TDM6 1919 aa14.18□□□□□ -0.14
CDK11A-222ENST00000498810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.18□□□□□ -0.14
CDK11A-222ENST00000498810 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
CDK11A-222ENST00000498810 SSFA2P28290 1259 aa14.18□□□□□ -0.14
CDK11A-222ENST00000498810 POTEEQ6S8J3 1075 aa14.18□□□□□ -0.14
CDK11A-222ENST00000498810 CICQ96RK0 1608 aaPredicted RBP14.18□□□□□ -0.14
CDK11A-222ENST00000498810 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
CDK11A-222ENST00000498810 ITPK1Q13572 414 aa14.17□□□□□ -0.14
CDK11A-222ENST00000498810 RTF1Q92541 710 aaKnown RBP14.17□□□□□ -0.14
CDK11A-222ENST00000498810 RTCBQ9Y3I0 505 aaKnown RBP14.17□□□□□ -0.14
CDK11A-222ENST00000498810 RALBP1Q15311 655 aa14.16□□□□□ -0.14
CDK11A-222ENST00000498810 SPRYD3Q8NCJ5 442 aa14.16□□□□□ -0.14
CDK11A-222ENST00000498810 RSPH6AQ9H0K4 717 aa14.16□□□□□ -0.14
CDK11A-222ENST00000498810 LGR6Q9HBX8 967 aa14.16□□□□□ -0.14
CDK11A-222ENST00000498810 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.16□□□□□ -0.14
CDK11A-222ENST00000498810 MYH14Q7Z406 1995 aaKnown RBP14.16□□□□□ -0.14
CDK11A-222ENST00000498810 MAPK8IP3Q9UPT6 1336 aa14.15□□□□□ -0.14
CDK11A-222ENST00000498810 PBX2P40425 430 aa14.15□□□□□ -0.14
CDK11A-222ENST00000498810 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.15
CDK11A-222ENST00000498810 SLC39A6Q13433 755 aa14.14□□□□□ -0.15
CDK11A-222ENST00000498810 SYT17Q9BSW7 474 aa14.14□□□□□ -0.15
CDK11A-222ENST00000498810 PNNQ9H307 717 aaKnown RBP14.14□□□□□ -0.15
CDK11A-222ENST00000498810 CHD4Q14839 1912 aa14.13□□□□□ -0.15
CDK11A-222ENST00000498810 FCHSD2O94868 740 aa14.13□□□□□ -0.15
CDK11A-222ENST00000498810 RFC4P35249 363 aa14.13□□□□□ -0.15
CDK11A-222ENST00000498810 TRAPPC3LQ5T215 181 aa14.13□□□□□ -0.15
CDK11A-222ENST00000498810 SMIM5Q71RC9 77 aa14.13□□□□□ -0.15
CDK11A-222ENST00000498810 KCPQ6ZWJ8 1503 aa14.13□□□□□ -0.15
CDK11A-222ENST00000498810 MYBBP1AQ9BQG0 1328 aaKnown RBP14.13□□□□□ -0.15
CDK11A-222ENST00000498810 CRKLP46109 303 aaKnown RBP14.12□□□□□ -0.15
CDK11A-222ENST00000498810 LSM11P83369 360 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDK11A-222ENST00000498810 RC3H1Q5TC82 1133 aaKnown RBP14.11□□□□□ -0.15
CDK11A-222ENST00000498810 PHACTR3Q96KR7 559 aa14.11□□□□□ -0.15
CDK11A-222ENST00000498810 SLC4A9Q96Q91 983 aa14.11□□□□□ -0.15
CDK11A-222ENST00000498810 WDR43Q15061 677 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDK11A-222ENST00000498810 GPR162Q16538 588 aa14.1□□□□□ -0.15
CDK11A-222ENST00000498810 NPM2Q86SE8 214 aaKnown RBP14.1□□□□□ -0.15
CDK11A-222ENST00000498810 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
CDK11A-222ENST00000498810 DNAJC10Q8IXB1 793 aa14.1□□□□□ -0.15
CDK11A-222ENST00000498810 BTBD11A6QL63 1104 aa14.09□□□□□ -0.15
CDK11A-222ENST00000498810 RPS6KA4O75676 772 aa14.09□□□□□ -0.15
CDK11A-222ENST00000498810 EMILIN3Q9NT22 766 aa14.09□□□□□ -0.15
CDK11A-222ENST00000498810 CCDC87Q9NVE4 849 aa14.09□□□□□ -0.15
CDK11A-222ENST00000498810 ZNF330Q9Y3S2 320 aaPredicted RBP14.09□□□□□ -0.15
CDK11A-222ENST00000498810 ANKRD13DQ6ZTN6 518 aa14.08□□□□□ -0.16
CDK11A-222ENST00000498810 MCM10Q7L590 875 aa14.08□□□□□ -0.16
CDK11A-222ENST00000498810 IL17REQ8NFR9 667 aa14.08□□□□□ -0.16
CDK11A-222ENST00000498810 LAMB4A4D0S4 1761 aa14.08□□□□□ -0.16
CDK11A-222ENST00000498810 ZPR1O75312 459 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 STARD3NLO95772 234 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 MMP10P09238 476 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 ZNF790Q6PG37 636 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 ARHGEF1Q92888 912 aaKnown RBP14.07□□□□□ -0.16
CDK11A-222ENST00000498810 FMNL2Q96PY5 1086 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 COL15A1P39059 1388 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 CEMIPQ8WUJ3 1361 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 HEG1Q9ULI3 1381 aa14.07□□□□□ -0.16
CDK11A-222ENST00000498810 ARHGAP33O14559 1287 aa14.06□□□□□ -0.16
CDK11A-222ENST00000498810 YY1P25490 414 aa14.06□□□□□ -0.16
CDK11A-222ENST00000498810 VSIG10Q8N0Z9 540 aa14.06□□□□□ -0.16
CDK11A-222ENST00000498810 NLGN1Q8N2Q7 840 aa14.06□□□□□ -0.16
CDK11A-222ENST00000498810 NLGN2Q8NFZ4 835 aa14.06□□□□□ -0.16
CDK11A-222ENST00000498810 PARP3Q9Y6F1 533 aa14.06□□□□□ -0.16
CDK11A-222ENST00000498810 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
CDK11A-222ENST00000498810 SCN7AQ01118 1682 aa14.05□□□□□ -0.16
CDK11A-222ENST00000498810 N4BP2Q86UW6 1770 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms