RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 RTCBQ9Y3I0 505 aaKnown RBP7.83□□□□□ -1.16
CSNK1E-214ENST00000498529 SOS1Q07889 1333 aaPredicted RBP7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 COL3A1P02461 1466 aaPredicted RBP7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 FCHSD2O94868 740 aa7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 TPRNQ4KMQ1 711 aa7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 ASTLQ6HA08 431 aaPredicted RBP7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 INTS5Q6P9B9 1019 aaKnown RBP7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 SNED1Q8TER0 1413 aa7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 TSPYL2Q9H2G4 693 aaPredicted RBP7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 BCL2L12Q9HB09 334 aa7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 SRP68Q9UHB9 627 aaKnown RBP7.82□□□□□ -1.16
CSNK1E-214ENST00000498529 NFKBIEO00221 500 aa7.81□□□□□ -1.16
CSNK1E-214ENST00000498529 CHRNA5P30532 468 aa7.81□□□□□ -1.16
CSNK1E-214ENST00000498529 CRKLP46109 303 aaKnown RBP7.81□□□□□ -1.16
CSNK1E-214ENST00000498529 RASSF7Q02833 373 aa7.81□□□□□ -1.16
CSNK1E-214ENST00000498529 MMRN1Q13201 1228 aa7.81□□□□□ -1.16
CSNK1E-214ENST00000498529 TRAPPC3LQ5T215 181 aa7.81□□□□□ -1.16
CSNK1E-214ENST00000498529 ARHGAP27Q6ZUM4 889 aa7.81□□□□□ -1.16
CSNK1E-214ENST00000498529 RNF181Q9P0P0 153 aa7.81□□□□□ -1.16
CSNK1E-214ENST00000498529 KDM2BQ8NHM5 1336 aa7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 HSPA1AP0DMV8 641 aaKnown RBP7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 HSPA1BP0DMV9 641 aaKnown RBP7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 SMC1BQ8NDV3 1235 aa7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 PIM2Q9P1W9 311 aa7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 COL15A1P39059 1388 aa7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 NUP98P52948 1817 aa7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 TNRC18O15417 2968 aaPredicted RBP7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 DLG5Q8TDM6 1919 aa7.8□□□□□ -1.16
CSNK1E-214ENST00000498529 KDM3BQ7LBC6 1761 aa7.79□□□□□ -1.16
CSNK1E-214ENST00000498529 DALRD3Q5D0E6 543 aaKnown RBP7.79□□□□□ -1.16
CSNK1E-214ENST00000498529 AEBP1Q8IUX7 1158 aa7.79□□□□□ -1.16
CSNK1E-214ENST00000498529 RRAGCQ9HB90 399 aa7.79□□□□□ -1.16
CSNK1E-214ENST00000498529 PARP3Q9Y6F1 533 aa7.79□□□□□ -1.16
CSNK1E-214ENST00000498529 COL4A5P29400 1685 aa7.79□□□□□ -1.16
CSNK1E-214ENST00000498529 LAMB2P55268 1798 aa7.79□□□□□ -1.16
CSNK1E-214ENST00000498529 GLTPD2A6NH11 291 aa7.78□□□□□ -1.16
CSNK1E-214ENST00000498529 ATMINO43313 823 aaPredicted RBP7.78□□□□□ -1.16
CSNK1E-214ENST00000498529 RFC4P35249 363 aa7.78□□□□□ -1.16
CSNK1E-214ENST00000498529 NBR1Q14596 966 aa7.78□□□□□ -1.16
CSNK1E-214ENST00000498529 TNS4Q8IZW8 715 aa7.78□□□□□ -1.16
CSNK1E-214ENST00000498529 KIF12Q96FN5 646 aa7.78□□□□□ -1.16
CSNK1E-214ENST00000498529 PASKQ96RG2 1323 aa7.78□□□□□ -1.16
CSNK1E-214ENST00000498529 LTBP3Q9NS15 1303 aa7.78□□□□□ -1.16
CSNK1E-214ENST00000498529 HSP90AB1P08238 724 aaKnown RBP7.77□□□□□ -1.17
CSNK1E-214ENST00000498529 CYP19A1P11511 503 aaPredicted RBP7.77□□□□□ -1.17
CSNK1E-214ENST00000498529 NFIXQ14938 502 aa7.77□□□□□ -1.17
CSNK1E-214ENST00000498529 CDCA8Q53HL2 280 aa7.77□□□□□ -1.17
CSNK1E-214ENST00000498529 ZNF530Q6P9A1 599 aaPredicted RBP7.77□□□□□ -1.17
CSNK1E-214ENST00000498529 PDE4DIPQ5VU43 2346 aa7.77□□□□□ -1.17
CSNK1E-214ENST00000498529 ANKRD36CQ5JPF3 1778 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 CNTNAP1P78357 1384 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 SLC34A2O95436 690 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 LMNB1P20700 586 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 PSEN1P49768 467 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 DNAJC10Q8IXB1 793 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 NARFQ9UHQ1 456 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 PCDHB8Q9UN66 801 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 ZBTB1Q9Y2K1 713 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 PCDHB13Q9Y5F0 798 aa7.76□□□□□ -1.17
CSNK1E-214ENST00000498529 LRRC37AA6NMS7 1700 aa7.75□□□□□ -1.17
CSNK1E-214ENST00000498529 IL13P35225 146 aa7.75□□□□□ -1.17
CSNK1E-214ENST00000498529 AMOTQ4VCS5 1084 aa7.75□□□□□ -1.17
CSNK1E-214ENST00000498529 USPL1Q5W0Q7 1092 aa7.75□□□□□ -1.17
CSNK1E-214ENST00000498529 SPNS2Q8IVW8 549 aa7.75□□□□□ -1.17
CSNK1E-214ENST00000498529 PPM1GO15355 546 aaPredicted RBP7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 PTCD1O75127 700 aaKnown RBP7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 VEGFAP15692 232 aaPredicted RBP7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 CABP4P57796 275 aa7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 PLEKHO1Q53GL0 409 aaPredicted RBP7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 IFNL1Q8IU54 200 aa7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 C16orf71Q8IYS4 520 aaPredicted RBP7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 NFATC2IPQ8NCF5 419 aa7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 SLC52A2Q9HAB3 445 aa7.74□□□□□ -1.17
CSNK1E-214ENST00000498529 ZNF646O15015 1829 aaPredicted RBP7.73□□□□□ -1.17
CSNK1E-214ENST00000498529 FOXN1O15353 648 aa7.73□□□□□ -1.17
CSNK1E-214ENST00000498529 EIF5P55010 431 aaKnown RBP7.73□□□□□ -1.17
CSNK1E-214ENST00000498529 L3MBTL3Q96JM7 780 aaPredicted RBP7.73□□□□□ -1.17
CSNK1E-214ENST00000498529 MFRPQ9BY79 579 aa7.73□□□□□ -1.17
CSNK1E-214ENST00000498529 CASP8AP2Q9UKL3 1982 aa7.73□□□□□ -1.17
CSNK1E-214ENST00000498529 PSME4Q14997 1843 aa7.73□□□□□ -1.17
CSNK1E-214ENST00000498529 CEMIPQ8WUJ3 1361 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 LAMB1P07942 1786 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 MAP3K13O43283 966 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 SERPINB2P05120 415 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 MTHFSP49914 203 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 AKAP4Q5JQC9 854 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 TTLL6Q8N841 843 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 C7orf43Q8WVR3 580 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 MS4A3Q96HJ5 214 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 LGR6Q9HBX8 967 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 PRDM10Q9NQV6 1147 aa7.72□□□□□ -1.17
CSNK1E-214ENST00000498529 TAF1P21675 1872 aa7.71□□□□□ -1.18
CSNK1E-214ENST00000498529 RNMTO43148 476 aaKnown RBP7.71□□□□□ -1.18
CSNK1E-214ENST00000498529 PRR5LQ6MZQ0 368 aa7.71□□□□□ -1.18
CSNK1E-214ENST00000498529 FBXO22Q8NEZ5 403 aa7.71□□□□□ -1.18
CSNK1E-214ENST00000498529 HEG1Q9ULI3 1381 aa7.71□□□□□ -1.18
CSNK1E-214ENST00000498529 RIC1Q4ADV7 1423 aa7.7□□□□□ -1.18
CSNK1E-214ENST00000498529 DDX60Q8IY21 1712 aaKnown RBP7.7□□□□□ -1.18
CSNK1E-214ENST00000498529 POLR2AP24928 1970 aaKnown RBP7.7□□□□□ -1.18
CSNK1E-214ENST00000498529 ITGBL1O95965 494 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms