RNA–Protein interactions for RNA: ENST00000498479.5

RC3H2-210, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 2

Gene RC3H2, Length 5,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-210ENST00000498479 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
RC3H2-210ENST00000498479 KDM5AP29375 1690 aaKnown RBP13.87□□□□□ -0.19
RC3H2-210ENST00000498479 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
RC3H2-210ENST00000498479 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
RC3H2-210ENST00000498479 TRIM22Q8IYM9 498 aa13.87□□□□□ -0.19
RC3H2-210ENST00000498479 TBC1D2BQ9UPU7 963 aa13.87□□□□□ -0.19
RC3H2-210ENST00000498479 ZNF530Q6P9A1 599 aaPredicted RBP13.86□□□□□ -0.19
RC3H2-210ENST00000498479 DNAJC25Q9H1X3 360 aa13.86□□□□□ -0.19
RC3H2-210ENST00000498479 PTPRTO14522 1441 aa13.86□□□□□ -0.19
RC3H2-210ENST00000498479 MCM3P25205 808 aa13.86□□□□□ -0.19
RC3H2-210ENST00000498479 NAP1L1P55209 391 aaKnown RBP13.86□□□□□ -0.19
RC3H2-210ENST00000498479 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.86□□□□□ -0.19
RC3H2-210ENST00000498479 MAGEC2Q9UBF1 373 aaPredicted RBP13.86□□□□□ -0.19
RC3H2-210ENST00000498479 BTBD11A6QL63 1104 aa13.86□□□□□ -0.19
RC3H2-210ENST00000498479 MARCH6O60337 910 aa13.86□□□□□ -0.19
RC3H2-210ENST00000498479 FAM107BQ9H098 131 aa13.86□□□□□ -0.19
RC3H2-210ENST00000498479 ERO1AQ96HE7 468 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 MAP9Q49MG5 647 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 NECAB1Q8N987 351 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 WDR7Q9Y4E6 1490 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 IDI1Q13907 227 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 ARHGEF5Q12774 1597 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 PRDM15P57071 1507 aaPredicted RBP13.85□□□□□ -0.19
RC3H2-210ENST00000498479 TTC39AQ5SRH9 613 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 CCDC148Q8NFR7 591 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 GPT2Q8TD30 523 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 WASF1Q92558 559 aa13.85□□□□□ -0.19
RC3H2-210ENST00000498479 A0A1W2PP64 1363 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 CEP170Q5SW79 1584 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 ATP2B1P20020 1258 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 TXLNAP40222 546 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 UTP14CQ5TAP6 766 aaKnown RBP13.84□□□□□ -0.19
RC3H2-210ENST00000498479 NEK1Q96PY6 1258 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 AOX1Q06278 1338 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 FANCAO15360 1455 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 CALRP27797 417 aaKnown RBP13.84□□□□□ -0.19
RC3H2-210ENST00000498479 TTC41PQ6P2S7 1318 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 DENND4BO75064 1496 aaPredicted RBP13.84□□□□□ -0.19
RC3H2-210ENST00000498479 IMMTQ16891 758 aaKnown RBP13.84□□□□□ -0.19
RC3H2-210ENST00000498479 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
RC3H2-210ENST00000498479 FAM177BA6PVY3 158 aa13.83□□□□□ -0.19
RC3H2-210ENST00000498479 ZSCAN25Q6NSZ9 544 aa13.83□□□□□ -0.19
RC3H2-210ENST00000498479 OTUD7AQ8TE49 926 aaPredicted RBP13.83□□□□□ -0.19
RC3H2-210ENST00000498479 CCDC69A6NI79 296 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 U2AF2P26368 475 aaKnown RBP eCLIP13.83□□□□□ -0.21e-5■□□□□ 9.3
RC3H2-210ENST00000498479 KIF4BQ2VIQ3 1234 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 CEP89Q96ST8 783 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 RBM8AQ9Y5S9 174 aaKnown RBP13.83□□□□□ -0.2
RC3H2-210ENST00000498479 SBNO2Q9Y2G9 1366 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 LUZP1Q86V48 1076 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 PHACTR3Q96KR7 559 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 ABCC4O15439 1325 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 GSPT1P15170 499 aaKnown RBP13.83□□□□□ -0.2
RC3H2-210ENST00000498479 CRACR2AQ9BSW2 395 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 CCDC8Q9H0W5 538 aaPredicted RBP13.83□□□□□ -0.2
RC3H2-210ENST00000498479 ARFGAP3Q9NP61 516 aa13.83□□□□□ -0.2
RC3H2-210ENST00000498479 GADD45BO75293 160 aaPredicted RBP13.82□□□□□ -0.2
RC3H2-210ENST00000498479 MSH6P52701 1360 aa13.82□□□□□ -0.2
RC3H2-210ENST00000498479 CEP131Q9UPN4 1083 aa13.82□□□□□ -0.2
RC3H2-210ENST00000498479 DMTNQ08495 405 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
RC3H2-210ENST00000498479 LARP1Q6PKG0 1096 aaKnown RBP13.81□□□□□ -0.2
RC3H2-210ENST00000498479 IVLP07476 585 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 LMAN1P49257 510 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 STIM1Q13586 685 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 DBF4Q9UBU7 674 aaPredicted RBP13.81□□□□□ -0.2
RC3H2-210ENST00000498479 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 C17orf53Q8N3J3 647 aaPredicted RBP13.81□□□□□ -0.2
RC3H2-210ENST00000498479 DNAI1Q9UI46 699 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 IGSF3O75054 1194 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 ERBB4Q15303 1308 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 GNG11P61952 73 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 MRPS27Q92552 414 aaKnown RBP13.81□□□□□ -0.2
RC3H2-210ENST00000498479 SSH2Q76I76 1423 aa13.81□□□□□ -0.2
RC3H2-210ENST00000498479 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
RC3H2-210ENST00000498479 SOS1Q07889 1333 aaPredicted RBP13.8□□□□□ -0.2
RC3H2-210ENST00000498479 ZNF75DP51815 510 aa13.8□□□□□ -0.2
RC3H2-210ENST00000498479 GUCY1B3Q02153 619 aa13.8□□□□□ -0.2
RC3H2-210ENST00000498479 SHTN1A0MZ66 631 aa13.8□□□□□ -0.2
RC3H2-210ENST00000498479 AOPEPQ8N6M6 819 aa13.8□□□□□ -0.2
RC3H2-210ENST00000498479 SKIDA1Q1XH10 827 aa13.8□□□□□ -0.2
RC3H2-210ENST00000498479 CCDC181Q5TID7 509 aa13.8□□□□□ -0.2
RC3H2-210ENST00000498479 KCNG4Q8TDN1 519 aa13.8□□□□□ -0.2
RC3H2-210ENST00000498479 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.8□□□□□ -0.21e-25■■■■□ 21.5
RC3H2-210ENST00000498479 V9GYY5 206 aaPredicted RBP13.8□□□□□ -0.2
RC3H2-210ENST00000498479 GOLGA6L10A6NI86 522 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 BIN1O00499 593 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 AMOTL1Q8IY63 956 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 LUC7LQ9NQ29 371 aaKnown RBP13.79□□□□□ -0.2
RC3H2-210ENST00000498479 RAPGEF3O95398 923 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 FBLN1P23142 703 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 TUBB4BP68371 445 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 PKP1Q13835 747 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 ATL3Q6DD88 541 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 CNNM3Q8NE01 707 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 MYO6Q9UM54 1294 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 RAD50Q92878 1312 aa13.79□□□□□ -0.2
RC3H2-210ENST00000498479 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms