RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 TNRC6CQ9HCJ0 1690 aaKnown RBP13.01□□□□□ -0.33
TSPAN1-209ENST00000498443 UBR2Q8IWV8 1755 aa13.01□□□□□ -0.33
TSPAN1-209ENST00000498443 C4AP0C0L4 1744 aa13□□□□□ -0.33
TSPAN1-209ENST00000498443 RPS6KA4O75676 772 aa13□□□□□ -0.33
TSPAN1-209ENST00000498443 ANXA1P04083 346 aa13□□□□□ -0.33
TSPAN1-209ENST00000498443 RFC4P35249 363 aa13□□□□□ -0.33
TSPAN1-209ENST00000498443 GOLGA2Q08379 1002 aa13□□□□□ -0.33
TSPAN1-209ENST00000498443 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
TSPAN1-209ENST00000498443 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
TSPAN1-209ENST00000498443 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
TSPAN1-209ENST00000498443 BRCA1P38398 1863 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 CHL1O00533 1208 aa12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 TCERG1O14776 1098 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 CHRNA5P30532 468 aa12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 RC3H1Q5TC82 1133 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 MBIPQ9NS73 344 aa12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 ARFGEF1Q9Y6D6 1849 aa12.99□□□□□ -0.33
TSPAN1-209ENST00000498443 RASSF7Q02833 373 aa12.98□□□□□ -0.33
TSPAN1-209ENST00000498443 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
TSPAN1-209ENST00000498443 BCL2L12Q9HB09 334 aa12.98□□□□□ -0.33
TSPAN1-209ENST00000498443 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
TSPAN1-209ENST00000498443 KDM3BQ7LBC6 1761 aa12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 SOS1Q07889 1333 aaPredicted RBP12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 MS4A1P11836 297 aa12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 GYS1P13807 737 aa12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 EIF2S2P20042 333 aaKnown RBP12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 KCNA3P22001 575 aa12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 PROSER3Q2NL68 480 aa12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 MKRN1Q9UHC7 482 aaKnown RBP12.97□□□□□ -0.33
TSPAN1-209ENST00000498443 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
TSPAN1-209ENST00000498443 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
TSPAN1-209ENST00000498443 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
TSPAN1-209ENST00000498443 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
TSPAN1-209ENST00000498443 C8orf58Q8NAV2 365 aa12.96□□□□□ -0.33
TSPAN1-209ENST00000498443 ZNF428Q96B54 188 aa12.96□□□□□ -0.33
TSPAN1-209ENST00000498443 E9PSI1 815 aa12.95□□□□□ -0.34
TSPAN1-209ENST00000498443 MYL6BP14649 208 aa12.95□□□□□ -0.34
TSPAN1-209ENST00000498443 EIF5P55010 431 aaKnown RBP12.95□□□□□ -0.34
TSPAN1-209ENST00000498443 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
TSPAN1-209ENST00000498443 ZNF521Q96K83 1311 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 SBF1O95248 1867 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 SLC34A2O95436 690 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 STARD3NLO95772 234 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 VEGFAP15692 232 aaPredicted RBP12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 ANP32AP39687 249 aaKnown RBP12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 PDIA6Q15084 440 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 TTLL7Q6ZT98 887 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 CCDC24Q8N4L8 307 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 CDCA7LQ96GN5 454 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
TSPAN1-209ENST00000498443 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
TSPAN1-209ENST00000498443 DDR1Q08345 913 aa12.92□□□□□ -0.34
TSPAN1-209ENST00000498443 SLFN5Q08AF3 891 aa12.92□□□□□ -0.34
TSPAN1-209ENST00000498443 HLFQ16534 295 aa12.92□□□□□ -0.34
TSPAN1-209ENST00000498443 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
TSPAN1-209ENST00000498443 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
TSPAN1-209ENST00000498443 COL15A1P39059 1388 aa12.92□□□□□ -0.34
TSPAN1-209ENST00000498443 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
TSPAN1-209ENST00000498443 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
TSPAN1-209ENST00000498443 FOXN1O15353 648 aa12.91□□□□□ -0.34
TSPAN1-209ENST00000498443 ADRA2BP18089 450 aa12.91□□□□□ -0.34
TSPAN1-209ENST00000498443 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
TSPAN1-209ENST00000498443 LRP10Q7Z4F1 713 aa12.91□□□□□ -0.34
TSPAN1-209ENST00000498443 IFT57Q9NWB7 429 aa12.91□□□□□ -0.34
TSPAN1-209ENST00000498443 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
TSPAN1-209ENST00000498443 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 LMNB1P20700 586 aa12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 AAMPQ13685 434 aa12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 NFIXQ14938 502 aa12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 TEX13AQ9BXU3 409 aaPredicted RBP12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
TSPAN1-209ENST00000498443 CCDC88AQ3V6T2 1871 aa12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 TM4SF1P30408 202 aa12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 GNAI1P63096 354 aa12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 AIMP1Q12904 312 aaKnown RBP12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 CHPF2Q9P2E5 772 aa12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 ZNF219Q9P2Y4 722 aaPredicted RBP12.89□□□□□ -0.35
TSPAN1-209ENST00000498443 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
TSPAN1-209ENST00000498443 ZPR1O75312 459 aa12.88□□□□□ -0.35
TSPAN1-209ENST00000498443 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
TSPAN1-209ENST00000498443 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
TSPAN1-209ENST00000498443 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
TSPAN1-209ENST00000498443 G2E3Q7L622 706 aa12.87□□□□□ -0.35
TSPAN1-209ENST00000498443 WDR63Q8IWG1 891 aa12.87□□□□□ -0.35
TSPAN1-209ENST00000498443 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
TSPAN1-209ENST00000498443 XAGE3Q8WTP9 111 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms