RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CYP2U1Q7Z449 544 aa8.03□□□□□ -1.12
HMGXB4-208ENST00000498325 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
HMGXB4-208ENST00000498325 EDARADDQ8WWZ3 215 aa8.03□□□□□ -1.12
HMGXB4-208ENST00000498325 PTPRKQ15262 1439 aa8.03□□□□□ -1.12
HMGXB4-208ENST00000498325 PLA2R1Q13018 1463 aa8.02□□□□□ -1.13
HMGXB4-208ENST00000498325 SHANK2Q9UPX8 1470 aa8.02□□□□□ -1.13
HMGXB4-208ENST00000498325 CPS1P31327 1500 aa8.02□□□□□ -1.13
HMGXB4-208ENST00000498325 MAP3K1Q13233 1512 aa8.02□□□□□ -1.13
HMGXB4-208ENST00000498325 AMPD1P23109 780 aa8.01□□□□□ -1.13
HMGXB4-208ENST00000498325 GPAMQ9HCL2 828 aa8.01□□□□□ -1.13
HMGXB4-208ENST00000498325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.01□□□□□ -1.13
HMGXB4-208ENST00000498325 CASKIN1Q8WXD9 1431 aa8.01□□□□□ -1.13
HMGXB4-208ENST00000498325 CFAP74Q9C0B2 1584 aa8.01□□□□□ -1.13
HMGXB4-208ENST00000498325 FYCO1Q9BQS8 1478 aa8□□□□□ -1.13
HMGXB4-208ENST00000498325 RNF20Q5VTR2 975 aa8□□□□□ -1.13
HMGXB4-208ENST00000498325 GOLGA6L1Q8N7Z2 621 aa8□□□□□ -1.13
HMGXB4-208ENST00000498325 ARHGEF10LQ9HCE6 1279 aa8□□□□□ -1.13
HMGXB4-208ENST00000498325 ZBBXA8MT70 800 aa7.99□□□□□ -1.13
HMGXB4-208ENST00000498325 PIK3R2O00459 728 aa7.99□□□□□ -1.13
HMGXB4-208ENST00000498325 THBS1P07996 1170 aa7.99□□□□□ -1.13
HMGXB4-208ENST00000498325 NPATQ14207 1427 aa7.99□□□□□ -1.13
HMGXB4-208ENST00000498325 LINC00114Q6XXX2 140 aa7.99□□□□□ -1.13
HMGXB4-208ENST00000498325 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
HMGXB4-208ENST00000498325 SUV39H2Q9H5I1 410 aa7.99□□□□□ -1.13
HMGXB4-208ENST00000498325 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-208ENST00000498325 C1QTNF9BB2RNN3 333 aa7.98□□□□□ -1.13
HMGXB4-208ENST00000498325 AFAP1Q8N556 730 aa7.98□□□□□ -1.13
HMGXB4-208ENST00000498325 KRTAP9-2Q9BYQ4 174 aa7.98□□□□□ -1.13
HMGXB4-208ENST00000498325 TIAM1Q13009 1591 aa7.97□□□□□ -1.13
HMGXB4-208ENST00000498325 BMP4P12644 408 aa7.97□□□□□ -1.13
HMGXB4-208ENST00000498325 SCTRP47872 440 aa7.97□□□□□ -1.13
HMGXB4-208ENST00000498325 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
HMGXB4-208ENST00000498325 TRIM34Q9BYJ4 488 aa7.97□□□□□ -1.13
HMGXB4-208ENST00000498325 NUP153P49790 1475 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-208ENST00000498325 DIP2CQ9Y2E4 1556 aa7.97□□□□□ -1.13
HMGXB4-208ENST00000498325 ZMYM3Q14202 1370 aa7.97□□□□□ -1.13
HMGXB4-208ENST00000498325 A0A1B0GTH6 734 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 PLEKHD1A6NEE1 506 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 GNB5O14775 395 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 HOXB4P17483 251 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 PHKA2P46019 1235 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 CD163Q86VB7 1156 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 DDRGK1Q96HY6 314 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 OSBPL3Q9H4L5 887 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 AGLP35573 1532 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 VWDEQ8N2E2 1590 aa7.96□□□□□ -1.14
HMGXB4-208ENST00000498325 PLCH2O75038 1416 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 TRAK2O60296 914 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 CSB-PGBD3P0DP91 1061 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 LBRQ14739 615 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 SLCO4C1Q6ZQN7 724 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 PGBD3Q8N328 593 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 RAB6BQ9NRW1 208 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 GGA1Q9UJY5 639 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 ATXN7L1Q9ULK2 861 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 PCDHB11Q9Y5F2 797 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 NEURL4Q96JN8 1562 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 CEP170BQ9Y4F5 1589 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 MYO3AQ8NEV4 1616 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 CNTLNQ9NXG0 1405 aa7.95□□□□□ -1.14
HMGXB4-208ENST00000498325 CCDC18Q5T9S5 1454 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 LRRC9Q6ZRR7 1453 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 REREQ9P2R6 1566 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 RAPGEF6Q8TEU7 1601 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 KRTAP9-6A0A140TA67 174 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 C2CD2LO14523 706 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 RFC5P40937 340 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 CENPCQ03188 943 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 UBAP2LQ14157 1087 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 CNKSR1Q969H4 720 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 ESYT1Q9BSJ8 1104 aa7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 NOP53Q9NZM5 478 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 ZNF142P52746 1687 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-208ENST00000498325 LRRC7Q96NW7 1537 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 GNRH1P01148 92 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 CHRNA4P43681 627 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 EFHC2Q5JST6 749 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 BTBD6Q96KE9 485 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 ZSCAN10Q96SZ4 725 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 FAM117AQ9C073 453 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 SEMA6BQ9H3T3 888 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 RUBCNLQ9H714 662 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 MTUS2Q5JR59 1369 aa7.93□□□□□ -1.14
HMGXB4-208ENST00000498325 ABCA6Q8N139 1617 aa7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 IL2RAP01589 272 aa7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 ITGB7P26010 798 aa7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 GTF2E1P29083 439 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 GNASQ5JWF2 1037 aa7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 ABHD17AQ96GS6 310 aa7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 KDM4CQ9H3R0 1056 aa7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 CDK11AQ9UQ88 783 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 ZNF518AQ6AHZ1 1483 aa7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 KDM5CP41229 1560 aa7.92□□□□□ -1.14
HMGXB4-208ENST00000498325 EPXP11678 715 aa7.91□□□□□ -1.14
HMGXB4-208ENST00000498325 FGFR3P22607 806 aa7.91□□□□□ -1.14
HMGXB4-208ENST00000498325 CTBSQ01459 385 aa7.91□□□□□ -1.14
HMGXB4-208ENST00000498325 TMEM214Q6NUQ4 689 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-208ENST00000498325 MSX1P28360 303 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms