RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	C10orf71	Q711Q0	1435 aa		10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	MAP3K15	Q6ZN16	1313 aa		10.4	□□□□□ -0.74
EFNA1-205	ENST00000497282		E9PSI1	815 aa		10.4	□□□□□ -0.74
EFNA1-205	ENST00000497282	POLRMT	O00411	1230 aa	Known RBP	10.4	□□□□□ -0.74
EFNA1-205	ENST00000497282	TCERG1	O14776	1098 aa	Known RBP	10.4	□□□□□ -0.74
EFNA1-205	ENST00000497282	TM4SF1	P30408	202 aa		10.4	□□□□□ -0.74
EFNA1-205	ENST00000497282	HLF	Q16534	295 aa		10.4	□□□□□ -0.74
EFNA1-205	ENST00000497282	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.4	□□□□□ -0.74
EFNA1-205	ENST00000497282	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.4	□□□□□ -0.74
EFNA1-205	ENST00000497282	ATP10D	Q9P241	1426 aa		10.4	□□□□□ -0.75
EFNA1-205	ENST00000497282	CARMIL3	Q8ND23	1372 aa		10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	COL11A2	P13942	1736 aa	Predicted RBP	10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	VAMP4	O75379	141 aa		10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	BICDL1	Q6ZP65	573 aa		10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	NPM2	Q86SE8	214 aa	Known RBP	10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	TRMT2A	Q8IZ69	625 aa	Known RBP	10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	XAGE3	Q8WTP9	111 aa		10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	ZBTB3	Q9H5J0	574 aa		10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	PHAX	Q9H814	394 aa	Known RBP	10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	DBF4	Q9UBU7	674 aa	Predicted RBP	10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	DLEC1	Q9Y238	1755 aa		10.39	□□□□□ -0.75
EFNA1-205	ENST00000497282	BRCA1	P38398	1863 aa	Known RBP	10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	AIMP1	Q12904	312 aa	Known RBP	10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	CCDC30	Q5VVM6	783 aa		10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	KIF6	Q6ZMV9	814 aa		10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	COPS6	Q7L5N1	327 aa		10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	KLHL34	Q8N239	644 aa		10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	NLGN2	Q8NFZ4	835 aa		10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	SYT17	Q9BSW7	474 aa		10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	PARP3	Q9Y6F1	533 aa		10.38	□□□□□ -0.75
EFNA1-205	ENST00000497282	UBN2	Q6ZU65	1347 aa		10.37	□□□□□ -0.75
EFNA1-205	ENST00000497282	PXDNL	A1KZ92	1463 aa		10.37	□□□□□ -0.75
EFNA1-205	ENST00000497282	ERVV-1	B6SEH8	477 aa		10.37	□□□□□ -0.75
EFNA1-205	ENST00000497282	RGL2	O15211	777 aa		10.37	□□□□□ -0.75
EFNA1-205	ENST00000497282	CLEC4G	Q6UXB4	293 aa		10.37	□□□□□ -0.75
EFNA1-205	ENST00000497282	HYPK	Q9NX55	129 aa		10.37	□□□□□ -0.75
EFNA1-205	ENST00000497282	CACNA1F	O60840	1977 aa		10.37	□□□□□ -0.75
EFNA1-205	ENST00000497282	ZBED9	Q6R2W3	1325 aa		10.36	□□□□□ -0.75
EFNA1-205	ENST00000497282	SERPINB2	P05120	415 aa		10.36	□□□□□ -0.75
EFNA1-205	ENST00000497282	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.36	□□□□□ -0.75
EFNA1-205	ENST00000497282	G2E3	Q7L622	706 aa		10.36	□□□□□ -0.75
EFNA1-205	ENST00000497282	ZNF652	Q9Y2D9	606 aa		10.36	□□□□□ -0.75
EFNA1-205	ENST00000497282	GPT	P24298	496 aa		10.35	□□□□□ -0.75
EFNA1-205	ENST00000497282	PRR5L	Q6MZQ0	368 aa		10.35	□□□□□ -0.75
EFNA1-205	ENST00000497282	PLBD2	Q8NHP8	589 aa		10.35	□□□□□ -0.75
EFNA1-205	ENST00000497282	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
EFNA1-205	ENST00000497282	ADCY9	O60503	1353 aa		10.35	□□□□□ -0.75
EFNA1-205	ENST00000497282	LAMB2	P55268	1798 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	DDX60	Q8IY21	1712 aa	Known RBP	10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	SLC4A2	P04920	1241 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	ZNF34	Q8IZ26	560 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	CCDC24	Q8N4L8	307 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	SETDB2	Q96T68	719 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	STK31	Q9BXU1	1019 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	CD2AP	Q9Y5K6	639 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	ABCC12	Q96J65	1359 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	CACNA1S	Q13698	1873 aa		10.34	□□□□□ -0.75
EFNA1-205	ENST00000497282	FAM177B	A6PVY3	158 aa		10.33	□□□□□ -0.76
EFNA1-205	ENST00000497282	FLII	Q13045	1269 aa		10.33	□□□□□ -0.76
EFNA1-205	ENST00000497282	ANKRD13D	Q6ZTN6	518 aa		10.33	□□□□□ -0.76
EFNA1-205	ENST00000497282	NTSR2	O95665	410 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	TCIRG1	Q13488	830 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	SUSD4	Q5VX71	490 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	NLRP10	Q86W26	655 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	CNBD1	Q8NA66	436 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	ZNF428	Q96B54	188 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	ISCA1	Q9BUE6	129 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	BCL2L13	Q9BXK5	485 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	CHMP4A	Q9BY43	222 aa		10.32	□□□□□ -0.76
EFNA1-205	ENST00000497282	PI4KAP2	A4QPH2	592 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	ATP5J2-PTCD1	G3V325	749 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	DPEP1	P16444	411 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	CHRNA5	P30532	468 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	HSP90AB3P	Q58FF7	597 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	RIC3	Q7Z5B4	369 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	NUTM1	Q86Y26	1132 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	MRPL50	Q8N5N7	158 aa	Known RBP	10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	PI4KAP1	Q8N8J0	262 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	SSH1	Q8WYL5	1049 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	WWC3	Q9ULE0	1092 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	MAP3K2	Q9Y2U5	619 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	RIC1	Q4ADV7	1423 aa		10.31	□□□□□ -0.76
EFNA1-205	ENST00000497282	ARFGEF1	Q9Y6D6	1849 aa		10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282		A0A0G2JLW4	131 aa		10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	DDX58	O95786	925 aa	Known RBP	10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	KCNA3	P22001	575 aa		10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	TGFB2	P61812	414 aa		10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	FKBP5	Q13451	457 aa	Predicted RBP	10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	ERFE	Q4G0M1	354 aa		10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	PARP10	Q53GL7	1025 aa		10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	KSR2	Q6VAB6	950 aa		10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	MYD88	Q99836	296 aa		10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	METTL22	Q9BUU2	404 aa	Predicted RBP	10.3	□□□□□ -0.76
EFNA1-205	ENST00000497282	COL4A1	P02462	1669 aa		10.29	□□□□□ -0.76
EFNA1-205	ENST00000497282		F6X3S4	739 aa		10.29	□□□□□ -0.76

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