RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 TOMM70O94826 608 aa16.67■□□□□ 0.26
PPM1F-209ENST00000497072 HSPA6P17066 643 aa16.67■□□□□ 0.26
PPM1F-209ENST00000497072 EIF4A1P60842 406 aaKnown RBP16.67■□□□□ 0.26
PPM1F-209ENST00000497072 RASSF7Q02833 373 aa16.67■□□□□ 0.26
PPM1F-209ENST00000497072 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
PPM1F-209ENST00000497072 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
PPM1F-209ENST00000497072 NGEFQ8N5V2 710 aa16.67■□□□□ 0.26
PPM1F-209ENST00000497072 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
PPM1F-209ENST00000497072 THUMPD2Q9BTF0 503 aaKnown RBP16.67■□□□□ 0.26
PPM1F-209ENST00000497072 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
PPM1F-209ENST00000497072 ZC3H4Q9UPT8 1303 aaKnown RBP16.67■□□□□ 0.26
PPM1F-209ENST00000497072 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
PPM1F-209ENST00000497072 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
PPM1F-209ENST00000497072 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
PPM1F-209ENST00000497072 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
PPM1F-209ENST00000497072 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
PPM1F-209ENST00000497072 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
PPM1F-209ENST00000497072 KDM3BQ7LBC6 1761 aa16.65■□□□□ 0.26
PPM1F-209ENST00000497072 C21orf2O43822 256 aa16.65■□□□□ 0.26
PPM1F-209ENST00000497072 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
PPM1F-209ENST00000497072 MYL6BP14649 208 aa16.64■□□□□ 0.25
PPM1F-209ENST00000497072 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.25
PPM1F-209ENST00000497072 NYXQ9GZU5 481 aa16.64■□□□□ 0.25
PPM1F-209ENST00000497072 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
PPM1F-209ENST00000497072 ANKRD31Q8N7Z5 1873 aa16.64■□□□□ 0.25
PPM1F-209ENST00000497072 SBF1O95248 1867 aa16.63■□□□□ 0.25
PPM1F-209ENST00000497072 ERVV-1B6SEH8 477 aa16.63■□□□□ 0.25
PPM1F-209ENST00000497072 SRGNP10124 158 aa16.63■□□□□ 0.25
PPM1F-209ENST00000497072 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
PPM1F-209ENST00000497072 ERBB4Q15303 1308 aa16.63■□□□□ 0.25
PPM1F-209ENST00000497072 DPY19L2Q6NUT2 758 aa16.62■□□□□ 0.25
PPM1F-209ENST00000497072 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
PPM1F-209ENST00000497072 RRAGCQ9HB90 399 aa16.62■□□□□ 0.25
PPM1F-209ENST00000497072 MAP3K15Q6ZN16 1313 aa16.62■□□□□ 0.25
PPM1F-209ENST00000497072 NPR1P16066 1061 aa16.61■□□□□ 0.25
PPM1F-209ENST00000497072 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
PPM1F-209ENST00000497072 HLFQ16534 295 aa16.61■□□□□ 0.25
PPM1F-209ENST00000497072 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
PPM1F-209ENST00000497072 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
PPM1F-209ENST00000497072 RBM46Q8TBY0 533 aaKnown RBP16.61■□□□□ 0.25
PPM1F-209ENST00000497072 TAOK3Q9H2K8 898 aa16.61■□□□□ 0.25
PPM1F-209ENST00000497072 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
PPM1F-209ENST00000497072 GLTPD2A6NH11 291 aa16.6■□□□□ 0.25
PPM1F-209ENST00000497072 NFKBIEO00221 500 aa16.6■□□□□ 0.25
PPM1F-209ENST00000497072 APLP1P51693 650 aa16.6■□□□□ 0.25
PPM1F-209ENST00000497072 ALDH1B1P30837 517 aa16.59■□□□□ 0.25
PPM1F-209ENST00000497072 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
PPM1F-209ENST00000497072 ZBTB3Q9H5J0 574 aa16.59■□□□□ 0.25
PPM1F-209ENST00000497072 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
PPM1F-209ENST00000497072 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
PPM1F-209ENST00000497072 VEGFAP15692 232 aaPredicted RBP16.58■□□□□ 0.24
PPM1F-209ENST00000497072 FSTL1Q12841 308 aa16.58■□□□□ 0.24
PPM1F-209ENST00000497072 CCDC93Q567U6 631 aa16.58■□□□□ 0.24
PPM1F-209ENST00000497072 TTLL7Q6ZT98 887 aa16.58■□□□□ 0.24
PPM1F-209ENST00000497072 CACNA1SQ13698 1873 aa16.57■□□□□ 0.24
PPM1F-209ENST00000497072 CCDC88AQ3V6T2 1871 aa16.57■□□□□ 0.24
PPM1F-209ENST00000497072 LTBP3Q9NS15 1303 aa16.57■□□□□ 0.24
PPM1F-209ENST00000497072 PPP1R42Q7Z4L9 355 aa16.57■□□□□ 0.24
PPM1F-209ENST00000497072 PRKRIP1Q9H875 184 aaPredicted RBP16.57■□□□□ 0.24
PPM1F-209ENST00000497072 KLRG2A4D1S0 409 aaPredicted RBP16.56■□□□□ 0.24
PPM1F-209ENST00000497072 GPTP24298 496 aa16.56■□□□□ 0.24
PPM1F-209ENST00000497072 SMC1BQ8NDV3 1235 aa16.56■□□□□ 0.24
PPM1F-209ENST00000497072 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
PPM1F-209ENST00000497072 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
PPM1F-209ENST00000497072 TIAM2Q8IVF5 1701 aa16.56■□□□□ 0.24
PPM1F-209ENST00000497072 FER1L6Q2WGJ9 1857 aa16.55■□□□□ 0.24
PPM1F-209ENST00000497072 NUP98P52948 1817 aa16.55■□□□□ 0.24
PPM1F-209ENST00000497072 PRELPP51888 382 aa16.55■□□□□ 0.24
PPM1F-209ENST00000497072 PARP10Q53GL7 1025 aa16.55■□□□□ 0.24
PPM1F-209ENST00000497072 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
PPM1F-209ENST00000497072 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
PPM1F-209ENST00000497072 RTKN2Q8IZC4 609 aa16.55■□□□□ 0.24
PPM1F-209ENST00000497072 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
PPM1F-209ENST00000497072 ARFGEF2Q9Y6D5 1785 aa16.55■□□□□ 0.24
PPM1F-209ENST00000497072 IBTKQ9P2D0 1353 aaPredicted RBP16.54■□□□□ 0.24
PPM1F-209ENST00000497072 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
PPM1F-209ENST00000497072 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
PPM1F-209ENST00000497072 NECTIN2Q92692 538 aa16.54■□□□□ 0.24
PPM1F-209ENST00000497072 CHL1O00533 1208 aa16.53■□□□□ 0.24
PPM1F-209ENST00000497072 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
PPM1F-209ENST00000497072 FKBP4Q02790 459 aaKnown RBP eCLIP16.52■□□□□ 0.24
PPM1F-209ENST00000497072 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
PPM1F-209ENST00000497072 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
PPM1F-209ENST00000497072 SUSD4Q5VX71 490 aa16.52■□□□□ 0.24
PPM1F-209ENST00000497072 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
PPM1F-209ENST00000497072 RBM17Q96I25 401 aaKnown RBP16.52■□□□□ 0.24
PPM1F-209ENST00000497072 TRIM35Q9UPQ4 493 aa16.52■□□□□ 0.24
PPM1F-209ENST00000497072 DICER1Q9UPY3 1922 aaKnown RBP16.52■□□□□ 0.23
PPM1F-209ENST00000497072 UBN2Q6ZU65 1347 aa16.51■□□□□ 0.23
PPM1F-209ENST00000497072 ANXA1P04083 346 aa16.51■□□□□ 0.23
PPM1F-209ENST00000497072 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
PPM1F-209ENST00000497072 CC2D2BQ6DHV5 1058 aa16.51■□□□□ 0.23
PPM1F-209ENST00000497072 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
PPM1F-209ENST00000497072 C7orf43Q8WVR3 580 aa16.51■□□□□ 0.23
PPM1F-209ENST00000497072 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
PPM1F-209ENST00000497072 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
PPM1F-209ENST00000497072 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
PPM1F-209ENST00000497072 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
PPM1F-209ENST00000497072 HOXB7P09629 217 aa16.5■□□□□ 0.23
PPM1F-209ENST00000497072 PDIA6Q15084 440 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms