RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 PCDHGC4Q9Y5F7 938 aa9.51□□□□□ -0.89
SNX13-211ENST00000496855 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
SNX13-211ENST00000496855 NEUROD4Q9HD90 331 aa9.5□□□□□ -0.89
SNX13-211ENST00000496855 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
SNX13-211ENST00000496855 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
SNX13-211ENST00000496855 ATXN7O15265 892 aaPredicted RBP9.49□□□□□ -0.89
SNX13-211ENST00000496855 BNIP3LO60238 219 aa9.49□□□□□ -0.89
SNX13-211ENST00000496855 SAMD5Q5TGI4 173 aa9.49□□□□□ -0.89
SNX13-211ENST00000496855 LRRC69Q6ZNQ3 347 aa9.49□□□□□ -0.89
SNX13-211ENST00000496855 ATXN7L1Q9ULK2 861 aaPredicted RBP9.49□□□□□ -0.89
SNX13-211ENST00000496855 RTN1Q16799 776 aa9.48□□□□□ -0.89
SNX13-211ENST00000496855 ABHD17AQ96GS6 310 aa9.48□□□□□ -0.89
SNX13-211ENST00000496855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.48□□□□□ -0.89
SNX13-211ENST00000496855 MBIPQ9NS73 344 aa9.48□□□□□ -0.89
SNX13-211ENST00000496855 ATP2B4P23634 1241 aa9.47□□□□□ -0.89
SNX13-211ENST00000496855 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
SNX13-211ENST00000496855 FAM157BP0CG42 384 aa9.47□□□□□ -0.89
SNX13-211ENST00000496855 MX2P20592 715 aa9.47□□□□□ -0.89
SNX13-211ENST00000496855 INSM1Q01101 510 aaPredicted RBP9.47□□□□□ -0.89
SNX13-211ENST00000496855 HSH2DQ96JZ2 352 aa9.47□□□□□ -0.89
SNX13-211ENST00000496855 SUSD3Q96L08 255 aa9.47□□□□□ -0.89
SNX13-211ENST00000496855 QTRT2Q9H974 415 aaKnown RBP9.47□□□□□ -0.89
SNX13-211ENST00000496855 DCDC2BA2VCK2 349 aa9.46□□□□□ -0.9
SNX13-211ENST00000496855 MAPTP10636 758 aaKnown RBP9.46□□□□□ -0.9
SNX13-211ENST00000496855 SRSF11Q05519 484 aaKnown RBP9.46□□□□□ -0.9
SNX13-211ENST00000496855 TNP2Q05952 138 aa9.46□□□□□ -0.9
SNX13-211ENST00000496855 HIF1AQ16665 826 aa9.46□□□□□ -0.9
SNX13-211ENST00000496855 ZNF280CQ8ND82 737 aa9.46□□□□□ -0.9
SNX13-211ENST00000496855 KHNYNO15037 678 aaKnown RBP9.45□□□□□ -0.9
SNX13-211ENST00000496855 FGFR3P22607 806 aa9.45□□□□□ -0.9
SNX13-211ENST00000496855 COL26A1Q96A83 441 aa9.45□□□□□ -0.9
SNX13-211ENST00000496855 MYO19Q96H55 970 aa9.45□□□□□ -0.9
SNX13-211ENST00000496855 USTQ9Y2C2 406 aa9.45□□□□□ -0.9
SNX13-211ENST00000496855 CARNS1A5YM72 827 aa9.44□□□□□ -0.9
SNX13-211ENST00000496855 ADAMTS2O95450 1211 aa9.44□□□□□ -0.9
SNX13-211ENST00000496855 SLURP2P0DP57 97 aa9.44□□□□□ -0.9
SNX13-211ENST00000496855 MKNK1Q9BUB5 465 aa9.44□□□□□ -0.9
SNX13-211ENST00000496855 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
SNX13-211ENST00000496855 IGF1RP08069 1367 aa9.43□□□□□ -0.9
SNX13-211ENST00000496855 EFSO43281 561 aa9.43□□□□□ -0.9
SNX13-211ENST00000496855 PTCD1O75127 700 aaKnown RBP9.43□□□□□ -0.9
SNX13-211ENST00000496855 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
SNX13-211ENST00000496855 HCN2Q9UL51 889 aa9.43□□□□□ -0.9
SNX13-211ENST00000496855 CTBSQ01459 385 aa9.42□□□□□ -0.9
SNX13-211ENST00000496855 DGKZQ13574 1117 aa9.42□□□□□ -0.9
SNX13-211ENST00000496855 CAPN12Q6ZSI9 719 aa9.42□□□□□ -0.9
SNX13-211ENST00000496855 ZSCAN1Q8NBB4 408 aa9.42□□□□□ -0.9
SNX13-211ENST00000496855 KLK14Q9P0G3 267 aa9.42□□□□□ -0.9
SNX13-211ENST00000496855 LRFN2Q9ULH4 789 aa9.42□□□□□ -0.9
SNX13-211ENST00000496855 TGFBR3LH3BV60 316 aa9.41□□□□□ -0.9
SNX13-211ENST00000496855 SSFA2P28290 1259 aa9.41□□□□□ -0.9
SNX13-211ENST00000496855 LAMC2Q13753 1193 aa9.41□□□□□ -0.9
SNX13-211ENST00000496855 COX20Q5RI15 118 aa9.41□□□□□ -0.9
SNX13-211ENST00000496855 IER5Q5VY09 327 aa9.41□□□□□ -0.9
SNX13-211ENST00000496855 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
SNX13-211ENST00000496855 CEP63Q96MT8 703 aa9.41□□□□□ -0.9
SNX13-211ENST00000496855 BCS1LQ9Y276 419 aa9.41□□□□□ -0.9
SNX13-211ENST00000496855 BMP4P12644 408 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 CD33P20138 364 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 MAP2K3P46734 347 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 TYRO3Q06418 890 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 C11orf91Q3C1V1 193 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 FAM182BQ5T319 152 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 BTLAQ7Z6A9 289 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 MARK1Q9P0L2 795 aa9.4□□□□□ -0.9
SNX13-211ENST00000496855 C2CD2LO14523 706 aa9.4□□□□□ -0.91
SNX13-211ENST00000496855 C16orf46Q6P387 395 aa9.4□□□□□ -0.91
SNX13-211ENST00000496855 SAP130Q9H0E3 1048 aa9.4□□□□□ -0.91
SNX13-211ENST00000496855 BRD7Q9NPI1 651 aa9.4□□□□□ -0.91
SNX13-211ENST00000496855 NAA30Q147X3 362 aaPredicted RBP9.39□□□□□ -0.91
SNX13-211ENST00000496855 DMGDHQ9UI17 866 aaKnown RBP9.39□□□□□ -0.91
SNX13-211ENST00000496855 SFSWAPQ12872 951 aaKnown RBP9.38□□□□□ -0.91
SNX13-211ENST00000496855 KCNQ4P56696 695 aa9.37□□□□□ -0.91
SNX13-211ENST00000496855 PHLDB3Q6NSJ2 640 aa9.37□□□□□ -0.91
SNX13-211ENST00000496855 WHAMMQ8TF30 809 aa9.37□□□□□ -0.91
SNX13-211ENST00000496855 ACDQ96AP0 544 aa9.37□□□□□ -0.91
SNX13-211ENST00000496855 IFT43Q96FT9 208 aa9.37□□□□□ -0.91
SNX13-211ENST00000496855 SEPT3Q9UH03 358 aa9.37□□□□□ -0.91
SNX13-211ENST00000496855 SCNN1AP37088 669 aa9.36□□□□□ -0.91
SNX13-211ENST00000496855 PDE4CQ08493 712 aa9.36□□□□□ -0.91
SNX13-211ENST00000496855 ZNF385CQ66K41 422 aaPredicted RBP9.36□□□□□ -0.91
SNX13-211ENST00000496855 OXCT2Q9BYC2 517 aaPredicted RBP9.36□□□□□ -0.91
SNX13-211ENST00000496855 GRIN2CQ14957 1233 aa9.35□□□□□ -0.91
SNX13-211ENST00000496855 LYPD4Q6UWN0 246 aa9.35□□□□□ -0.91
SNX13-211ENST00000496855 KCNH4Q9UQ05 1017 aa9.35□□□□□ -0.91
SNX13-211ENST00000496855 TNFRSF10BO14763 440 aa9.34□□□□□ -0.91
SNX13-211ENST00000496855 MICAL2O94851 1124 aa9.34□□□□□ -0.91
SNX13-211ENST00000496855 CELA2BP08218 269 aaPredicted RBP9.34□□□□□ -0.91
SNX13-211ENST00000496855 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
SNX13-211ENST00000496855 INPP5BP32019 993 aa9.34□□□□□ -0.91
SNX13-211ENST00000496855 IDH3AP50213 366 aa9.34□□□□□ -0.91
SNX13-211ENST00000496855 SVOPQ8N4V2 548 aa9.34□□□□□ -0.91
SNX13-211ENST00000496855 ARAFP10398 606 aa9.34□□□□□ -0.91
SNX13-211ENST00000496855 B4GALNT3Q6L9W6 998 aa9.34□□□□□ -0.91
SNX13-211ENST00000496855 GDF2Q9UK05 429 aaPredicted RBP9.34□□□□□ -0.91
SNX13-211ENST00000496855 PRR12Q9ULL5 1215 aa9.34□□□□□ -0.91
SNX13-211ENST00000496855 TREML1Q86YW5 311 aa9.33□□□□□ -0.92
SNX13-211ENST00000496855 ETFBKMTQ8IXQ9 262 aa9.33□□□□□ -0.92
SNX13-211ENST00000496855 GOLGA6L1Q8N7Z2 621 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms