RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
FN1-226ENST00000496542 PDZRN3Q9UPQ7 1066 aa17.11■□□□□ 0.33
FN1-226ENST00000496542 KDM2BQ8NHM5 1336 aa17.11■□□□□ 0.33
FN1-226ENST00000496542 TOMM70O94826 608 aa17.1■□□□□ 0.33
FN1-226ENST00000496542 LMNB1P20700 586 aa17.1■□□□□ 0.33
FN1-226ENST00000496542 CLEC4GQ6UXB4 293 aa17.1■□□□□ 0.33
FN1-226ENST00000496542 TIAM2Q8IVF5 1701 aa17.1■□□□□ 0.33
FN1-226ENST00000496542 NFKBIEO00221 500 aa17.09■□□□□ 0.33
FN1-226ENST00000496542 C16orf71Q8IYS4 520 aaPredicted RBP17.09■□□□□ 0.33
FN1-226ENST00000496542 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
FN1-226ENST00000496542 SLX4Q8IY92 1834 aa17.08■□□□□ 0.33
FN1-226ENST00000496542 C21orf2O43822 256 aa17.08■□□□□ 0.32
FN1-226ENST00000496542 PRELPP51888 382 aa17.08■□□□□ 0.32
FN1-226ENST00000496542 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.32
FN1-226ENST00000496542 NGEFQ8N5V2 710 aa17.08■□□□□ 0.32
FN1-226ENST00000496542 NIP7Q9Y221 180 aaKnown RBP eCLIP17.08■□□□□ 0.322e-32■□□□□ 10.2
FN1-226ENST00000496542 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
FN1-226ENST00000496542 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
FN1-226ENST00000496542 FER1L6Q2WGJ9 1857 aa17.07■□□□□ 0.32
FN1-226ENST00000496542 ARFGEF2Q9Y6D5 1785 aa17.07■□□□□ 0.32
FN1-226ENST00000496542 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
FN1-226ENST00000496542 SRGNP10124 158 aa17.06■□□□□ 0.32
FN1-226ENST00000496542 RIPK4P57078 832 aa17.06■□□□□ 0.32
FN1-226ENST00000496542 HLFQ16534 295 aa17.06■□□□□ 0.32
FN1-226ENST00000496542 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
FN1-226ENST00000496542 CNKSR1Q969H4 720 aa17.06■□□□□ 0.32
FN1-226ENST00000496542 MASTLQ96GX5 879 aa17.06■□□□□ 0.32
FN1-226ENST00000496542 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
FN1-226ENST00000496542 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
FN1-226ENST00000496542 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
FN1-226ENST00000496542 NUP98P52948 1817 aa17.05■□□□□ 0.32
FN1-226ENST00000496542 RGL2O15211 777 aa17.05■□□□□ 0.32
FN1-226ENST00000496542 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
FN1-226ENST00000496542 RBM46Q8TBY0 533 aaKnown RBP17.05■□□□□ 0.32
FN1-226ENST00000496542 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
FN1-226ENST00000496542 MYL6BP14649 208 aa17.04■□□□□ 0.32
FN1-226ENST00000496542 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
FN1-226ENST00000496542 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
FN1-226ENST00000496542 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
FN1-226ENST00000496542 TMPOP42166 694 aaKnown RBP17.03■□□□□ 0.32
FN1-226ENST00000496542 APLP1P51693 650 aa17.03■□□□□ 0.32
FN1-226ENST00000496542 CCDC146Q8IYE0 955 aa17.03■□□□□ 0.32
FN1-226ENST00000496542 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.32
FN1-226ENST00000496542 GLTPD2A6NH11 291 aa17.02■□□□□ 0.32
FN1-226ENST00000496542 NPR1P16066 1061 aa17.02■□□□□ 0.32
FN1-226ENST00000496542 LMOD3Q0VAK6 560 aa17.02■□□□□ 0.32
FN1-226ENST00000496542 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
FN1-226ENST00000496542 TAOK3Q9H2K8 898 aa17.02■□□□□ 0.32
FN1-226ENST00000496542 ERVV-1B6SEH8 477 aa17.01■□□□□ 0.31
FN1-226ENST00000496542 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
FN1-226ENST00000496542 NEUROD2Q15784 382 aa17.01■□□□□ 0.31
FN1-226ENST00000496542 ERFEQ4G0M1 354 aa17.01■□□□□ 0.31
FN1-226ENST00000496542 SOGA3Q5TF21 947 aa17.01■□□□□ 0.31
FN1-226ENST00000496542 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
FN1-226ENST00000496542 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
FN1-226ENST00000496542 GPTP24298 496 aa17■□□□□ 0.31
FN1-226ENST00000496542 ABCC12Q96J65 1359 aa17■□□□□ 0.31
FN1-226ENST00000496542 ERBB4Q15303 1308 aa16.99■□□□□ 0.31
FN1-226ENST00000496542 WDR90Q96KV7 1748 aa16.99■□□□□ 0.31
FN1-226ENST00000496542 KLRG2A4D1S0 409 aaPredicted RBP16.99■□□□□ 0.31
FN1-226ENST00000496542 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
FN1-226ENST00000496542 FSTL1Q12841 308 aa16.99■□□□□ 0.31
FN1-226ENST00000496542 NUTM1Q86Y26 1132 aa16.99■□□□□ 0.31
FN1-226ENST00000496542 NYXQ9GZU5 481 aa16.99■□□□□ 0.31
FN1-226ENST00000496542 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
FN1-226ENST00000496542 CCDC93Q567U6 631 aa16.98■□□□□ 0.31
FN1-226ENST00000496542 UBN2Q6ZU65 1347 aa16.97■□□□□ 0.31
FN1-226ENST00000496542 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
FN1-226ENST00000496542 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
FN1-226ENST00000496542 C7orf43Q8WVR3 580 aa16.97■□□□□ 0.31
FN1-226ENST00000496542 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
FN1-226ENST00000496542 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
FN1-226ENST00000496542 ANXA1P04083 346 aa16.96■□□□□ 0.31
FN1-226ENST00000496542 PROSER3Q2NL68 480 aa16.96■□□□□ 0.31
FN1-226ENST00000496542 OLFM4Q6UX06 510 aa16.96■□□□□ 0.31
FN1-226ENST00000496542 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
FN1-226ENST00000496542 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
FN1-226ENST00000496542 IBTKQ9P2D0 1353 aaPredicted RBP16.96■□□□□ 0.31
FN1-226ENST00000496542 HTRA3P83110 453 aa16.95■□□□□ 0.3
FN1-226ENST00000496542 PDIA6Q15084 440 aa16.95■□□□□ 0.3
FN1-226ENST00000496542 SUSD4Q5VX71 490 aa16.95■□□□□ 0.3
FN1-226ENST00000496542 GIGYF2Q6Y7W6 1299 aaKnown RBP16.95■□□□□ 0.3
FN1-226ENST00000496542 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
FN1-226ENST00000496542 ALDH1B1P30837 517 aa16.94■□□□□ 0.3
FN1-226ENST00000496542 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
FN1-226ENST00000496542 LRP10Q7Z4F1 713 aa16.94■□□□□ 0.3
FN1-226ENST00000496542 ZNF34Q8IZ26 560 aa16.94■□□□□ 0.3
FN1-226ENST00000496542 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
FN1-226ENST00000496542 ZNF277Q9NRM2 450 aaPredicted RBP16.94■□□□□ 0.3
FN1-226ENST00000496542 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
FN1-226ENST00000496542 POTECB2RU33 542 aa16.93■□□□□ 0.3
FN1-226ENST00000496542 NTSR2O95665 410 aa16.93■□□□□ 0.3
FN1-226ENST00000496542 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
FN1-226ENST00000496542 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
FN1-226ENST00000496542 RPGRQ92834 1020 aaKnown RBP16.93■□□□□ 0.3
FN1-226ENST00000496542 RIC1Q4ADV7 1423 aa16.93■□□□□ 0.3
FN1-226ENST00000496542 CHL1O00533 1208 aa16.92■□□□□ 0.3
FN1-226ENST00000496542 DDNO94850 711 aaPredicted RBP16.92■□□□□ 0.3
FN1-226ENST00000496542 AIMP1Q12904 312 aaKnown RBP16.92■□□□□ 0.3
FN1-226ENST00000496542 RTKN2Q8IZC4 609 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms