RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 SETDB2Q96T68 719 aa26.91■■□□□ 1.9
COL9A2-211ENST00000496215 NUP98P52948 1817 aa26.9■■□□□ 1.9
COL9A2-211ENST00000496215 ATP10DQ9P241 1426 aa26.9■■□□□ 1.9
COL9A2-211ENST00000496215 HLFQ16534 295 aa26.89■■□□□ 1.9
COL9A2-211ENST00000496215 KRT24Q2M2I5 525 aa26.89■■□□□ 1.9
COL9A2-211ENST00000496215 KIF6Q6ZMV9 814 aa26.89■■□□□ 1.9
COL9A2-211ENST00000496215 NGEFQ8N5V2 710 aa26.89■■□□□ 1.9
COL9A2-211ENST00000496215 NPHP1O15259 732 aa26.88■■□□□ 1.89
COL9A2-211ENST00000496215 EIF2S2P20042 333 aaKnown RBP26.88■■□□□ 1.89
COL9A2-211ENST00000496215 DALRD3Q5D0E6 543 aaKnown RBP26.88■■□□□ 1.89
COL9A2-211ENST00000496215 LRP10Q7Z4F1 713 aa26.88■■□□□ 1.89
COL9A2-211ENST00000496215 CNBD1Q8NA66 436 aa26.88■■□□□ 1.89
COL9A2-211ENST00000496215 PDIA6Q15084 440 aa26.87■■□□□ 1.89
COL9A2-211ENST00000496215 TTLL7Q6ZT98 887 aa26.87■■□□□ 1.89
COL9A2-211ENST00000496215 IFT57Q9NWB7 429 aa26.87■■□□□ 1.89
COL9A2-211ENST00000496215 MBIPQ9NS73 344 aa26.86■■□□□ 1.89
COL9A2-211ENST00000496215 MAP3K15Q6ZN16 1313 aa26.86■■□□□ 1.89
COL9A2-211ENST00000496215 GNAI1P63096 354 aa26.85■■□□□ 1.89
COL9A2-211ENST00000496215 PROSER3Q2NL68 480 aa26.85■■□□□ 1.89
COL9A2-211ENST00000496215 C2CD5Q86YS7 1000 aa26.85■■□□□ 1.89
COL9A2-211ENST00000496215 HOXB7P09629 217 aa26.84■■□□□ 1.89
COL9A2-211ENST00000496215 ZNF853P0CG23 659 aa26.84■■□□□ 1.89
COL9A2-211ENST00000496215 ST5P78524 1137 aa26.84■■□□□ 1.89
COL9A2-211ENST00000496215 ARHGAP27Q6ZUM4 889 aa26.84■■□□□ 1.89
COL9A2-211ENST00000496215 NIP7Q9Y221 180 aaKnown RBP eCLIP26.84■■□□□ 1.89
COL9A2-211ENST00000496215 ANKRD36CQ5JPF3 1778 aa26.84■■□□□ 1.89
COL9A2-211ENST00000496215 ERVV-1B6SEH8 477 aa26.83■■□□□ 1.89
COL9A2-211ENST00000496215 NBPF5PQ86XG9 351 aaPredicted RBP26.83■■□□□ 1.89
COL9A2-211ENST00000496215 NECTIN2Q92692 538 aa26.83■■□□□ 1.89
COL9A2-211ENST00000496215 BRIP1Q9BX63 1249 aa26.83■■□□□ 1.89
COL9A2-211ENST00000496215 ANXA1P04083 346 aa26.82■■□□□ 1.88
COL9A2-211ENST00000496215 ZBTB3Q9H5J0 574 aa26.82■■□□□ 1.88
COL9A2-211ENST00000496215 TNRC6CQ9HCJ0 1690 aaKnown RBP26.82■■□□□ 1.88
COL9A2-211ENST00000496215 SBF1O95248 1867 aa26.81■■□□□ 1.88
COL9A2-211ENST00000496215 CACNA1SQ13698 1873 aa26.81■■□□□ 1.88
COL9A2-211ENST00000496215 PDE6BP35913 854 aa26.81■■□□□ 1.88
COL9A2-211ENST00000496215 CCDC27Q2M243 656 aa26.81■■□□□ 1.88
COL9A2-211ENST00000496215 HDGFL1Q5TGJ6 251 aa26.81■■□□□ 1.88
COL9A2-211ENST00000496215 ARFGEF2Q9Y6D5 1785 aa26.8■■□□□ 1.88
COL9A2-211ENST00000496215 SENP3-EIF4A1A0A087X0R7 540 aa26.8■■□□□ 1.88
COL9A2-211ENST00000496215 H0YIN7 160 aa26.8■■□□□ 1.88
COL9A2-211ENST00000496215 PDZRN3Q9UPQ7 1066 aa26.8■■□□□ 1.88
COL9A2-211ENST00000496215 DDX21Q9NR30 783 aaKnown RBP eCLIP26.78■■□□□ 1.88
COL9A2-211ENST00000496215 CHPF2Q9P2E5 772 aa26.78■■□□□ 1.88
COL9A2-211ENST00000496215 SLX4Q8IY92 1834 aa26.77■■□□□ 1.88
COL9A2-211ENST00000496215 UBN2Q6ZU65 1347 aa26.77■■□□□ 1.88
COL9A2-211ENST00000496215 FAM177BA6PVY3 158 aa26.77■■□□□ 1.88
COL9A2-211ENST00000496215 DUSP27Q5VZP5 1158 aa26.77■■□□□ 1.88
COL9A2-211ENST00000496215 TTLL6Q8N841 843 aa26.77■■□□□ 1.88
COL9A2-211ENST00000496215 IBTKQ9P2D0 1353 aaPredicted RBP26.76■■□□□ 1.87
COL9A2-211ENST00000496215 PRELPP51888 382 aa26.76■■□□□ 1.87
COL9A2-211ENST00000496215 NCBP3Q53F19 620 aaKnown RBP26.76■■□□□ 1.87
COL9A2-211ENST00000496215 TPTE2Q6XPS3 522 aa26.76■■□□□ 1.87
COL9A2-211ENST00000496215 WWC1Q8IX03 1113 aa26.76■■□□□ 1.87
COL9A2-211ENST00000496215 FAM9BQ8IZU0 186 aa26.76■■□□□ 1.87
COL9A2-211ENST00000496215 ABCC12Q96J65 1359 aa26.75■■□□□ 1.87
COL9A2-211ENST00000496215 GIGYF2Q6Y7W6 1299 aaKnown RBP26.75■■□□□ 1.87
COL9A2-211ENST00000496215 ZNF526Q8TF50 670 aaPredicted RBP26.75■■□□□ 1.87
COL9A2-211ENST00000496215 SRGNP10124 158 aa26.74■■□□□ 1.87
COL9A2-211ENST00000496215 RASSF7Q02833 373 aa26.74■■□□□ 1.87
COL9A2-211ENST00000496215 XAGE3Q8WTP9 111 aa26.74■■□□□ 1.87
COL9A2-211ENST00000496215 ZNF622Q969S3 477 aaKnown RBP eCLIP26.74■■□□□ 1.87
COL9A2-211ENST00000496215 NYXQ9GZU5 481 aa26.74■■□□□ 1.87
COL9A2-211ENST00000496215 DBF4Q9UBU7 674 aaPredicted RBP26.74■■□□□ 1.87
COL9A2-211ENST00000496215 GPTP24298 496 aa26.73■■□□□ 1.87
COL9A2-211ENST00000496215 AIMP1Q12904 312 aaKnown RBP26.73■■□□□ 1.87
COL9A2-211ENST00000496215 C9orf131Q5VYM1 1079 aa26.73■■□□□ 1.87
COL9A2-211ENST00000496215 COPS6Q7L5N1 327 aa26.73■■□□□ 1.87
COL9A2-211ENST00000496215 FER1L6Q2WGJ9 1857 aa26.72■■□□□ 1.87
COL9A2-211ENST00000496215 IL16Q14005 1332 aa26.72■■□□□ 1.87
COL9A2-211ENST00000496215 GTF2E1P29083 439 aaPredicted RBP26.72■■□□□ 1.87
COL9A2-211ENST00000496215 ZNF34Q8IZ26 560 aa26.72■■□□□ 1.87
COL9A2-211ENST00000496215 KLRG2A4D1S0 409 aaPredicted RBP26.71■■□□□ 1.87
COL9A2-211ENST00000496215 NUTM1Q86Y26 1132 aa26.71■■□□□ 1.87
COL9A2-211ENST00000496215 TSR2Q969E8 191 aaKnown RBP26.71■■□□□ 1.87
COL9A2-211ENST00000496215 RIC1Q4ADV7 1423 aa26.71■■□□□ 1.87
COL9A2-211ENST00000496215 CCDC88AQ3V6T2 1871 aa26.7■■□□□ 1.87
COL9A2-211ENST00000496215 NFKBIEO00221 500 aa26.7■■□□□ 1.86
COL9A2-211ENST00000496215 STYK1Q6J9G0 422 aa26.7■■□□□ 1.86
COL9A2-211ENST00000496215 ELL2O00472 640 aaPredicted RBP26.69■■□□□ 1.86
COL9A2-211ENST00000496215 PARP10Q53GL7 1025 aa26.69■■□□□ 1.86
COL9A2-211ENST00000496215 SUSD4Q5VX71 490 aa26.69■■□□□ 1.86
COL9A2-211ENST00000496215 GPBP1L1Q9HC44 474 aaPredicted RBP26.69■■□□□ 1.86
COL9A2-211ENST00000496215 HYPKQ9NX55 129 aa26.69■■□□□ 1.86
COL9A2-211ENST00000496215 ZNF219Q9P2Y4 722 aaPredicted RBP26.69■■□□□ 1.86
COL9A2-211ENST00000496215 TIAM2Q8IVF5 1701 aa26.68■■□□□ 1.86
COL9A2-211ENST00000496215 C21orf2O43822 256 aa26.68■■□□□ 1.86
COL9A2-211ENST00000496215 ERFEQ4G0M1 354 aa26.68■■□□□ 1.86
COL9A2-211ENST00000496215 HSP90AB3PQ58FF7 597 aa26.68■■□□□ 1.86
COL9A2-211ENST00000496215 C8orf58Q8NAV2 365 aa26.68■■□□□ 1.86
COL9A2-211ENST00000496215 MASTLQ96GX5 879 aa26.68■■□□□ 1.86
COL9A2-211ENST00000496215 RNF181Q9P0P0 153 aa26.68■■□□□ 1.86
COL9A2-211ENST00000496215 SALL2Q9Y467 1007 aaPredicted RBP26.68■■□□□ 1.86
COL9A2-211ENST00000496215 NTSR2O95665 410 aa26.67■■□□□ 1.86
COL9A2-211ENST00000496215 PRPF40BQ6NWY9 871 aaKnown RBP26.67■■□□□ 1.86
COL9A2-211ENST00000496215 CNKSR1Q969H4 720 aa26.67■■□□□ 1.86
COL9A2-211ENST00000496215 C1QTNF8P60827 252 aa26.66■■□□□ 1.86
COL9A2-211ENST00000496215 PPP1R42Q7Z4L9 355 aa26.66■■□□□ 1.86
COL9A2-211ENST00000496215 CHMP4AQ9BY43 222 aa26.66■■□□□ 1.86
COL9A2-211ENST00000496215 NPR1P16066 1061 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms