RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 USP42Q9H9J4 1324 aaKnown RBP24.47■■□□□ 1.51
LYSMD4-209ENST00000496108 CASTP20810 708 aaKnown RBP24.47■■□□□ 1.51
LYSMD4-209ENST00000496108 SPC24Q8NBT2 197 aa24.47■■□□□ 1.51
LYSMD4-209ENST00000496108 CCDC171Q6TFL3 1326 aa24.47■■□□□ 1.51
LYSMD4-209ENST00000496108 CACNA1FO60840 1977 aa24.46■■□□□ 1.51
LYSMD4-209ENST00000496108 LARGE1O95461 756 aa24.46■■□□□ 1.51
LYSMD4-209ENST00000496108 KCNB2Q92953 911 aa24.46■■□□□ 1.51
LYSMD4-209ENST00000496108 MAP3K11Q16584 847 aa24.46■■□□□ 1.51
LYSMD4-209ENST00000496108 CCDC83Q8IWF9 413 aa24.46■■□□□ 1.51
LYSMD4-209ENST00000496108 SURF6O75683 361 aaKnown RBP24.45■■□□□ 1.5
LYSMD4-209ENST00000496108 SETD1BQ9UPS6 1966 aaKnown RBP24.45■■□□□ 1.5
LYSMD4-209ENST00000496108 TOPAZ1Q8N9V7 1692 aa24.45■■□□□ 1.5
LYSMD4-209ENST00000496108 USP6P35125 1406 aa24.45■■□□□ 1.5
LYSMD4-209ENST00000496108 TPRNQ4KMQ1 711 aa24.45■■□□□ 1.5
LYSMD4-209ENST00000496108 MAP4K4O95819 1239 aaPredicted RBP24.44■■□□□ 1.5
LYSMD4-209ENST00000496108 RUFY2Q8WXA3 655 aa24.44■■□□□ 1.5
LYSMD4-209ENST00000496108 NUP62CLQ9H1M0 184 aa24.44■■□□□ 1.5
LYSMD4-209ENST00000496108 ZSWIM6Q9HCJ5 1215 aa24.44■■□□□ 1.5
LYSMD4-209ENST00000496108 PDRG1Q9NUG6 133 aa24.44■■□□□ 1.5
LYSMD4-209ENST00000496108 KRT85P78386 507 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 PPP1R42Q7Z4L9 355 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 BABAM1Q9NWV8 329 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 MRVI1Q9Y6F6 885 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 TTC41PQ6P2S7 1318 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 FMN2Q9NZ56 1722 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 PLEKHG3A1L390 1219 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 SMTNL1A8MU46 457 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 PTGS1P23219 599 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 TYRO3Q06418 890 aa24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 LARP6Q9BRS8 491 aaKnown RBP24.43■■□□□ 1.5
LYSMD4-209ENST00000496108 U2AF2P26368 475 aaKnown RBP eCLIP24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 OGFRQ9NZT2 677 aa24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 NCBP1Q09161 790 aaKnown RBP24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 CWC27Q6UX04 472 aaKnown RBP24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 CYP46A1Q9Y6A2 500 aa24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 ACEP12821 1306 aa24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 IGSF1Q8N6C5 1336 aa24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 SBNO1A3KN83 1393 aa24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 FLT4P35916 1363 aa24.42■■□□□ 1.5
LYSMD4-209ENST00000496108 HSP90AB4PQ58FF6 505 aa24.41■■□□□ 1.5
LYSMD4-209ENST00000496108 SPDYE4A6NLX3 237 aa24.41■■□□□ 1.5
LYSMD4-209ENST00000496108 GLRX3O76003 335 aaKnown RBP24.41■■□□□ 1.5
LYSMD4-209ENST00000496108 TTC6Q86TZ1 520 aa24.41■■□□□ 1.5
LYSMD4-209ENST00000496108 SPG7Q9UQ90 795 aa24.41■■□□□ 1.5
LYSMD4-209ENST00000496108 VPS37CA5D8V6 355 aaPredicted RBP24.4■■□□□ 1.5
LYSMD4-209ENST00000496108 ST3GAL1Q11201 340 aa24.4■■□□□ 1.5
LYSMD4-209ENST00000496108 JAKMIP1Q96N16 626 aaKnown RBP24.4■■□□□ 1.5
LYSMD4-209ENST00000496108 LMTK3Q96Q04 1460 aa24.4■■□□□ 1.5
LYSMD4-209ENST00000496108 ADGRL3Q9HAR2 1447 aa24.39■■□□□ 1.5
LYSMD4-209ENST00000496108 CPA1P15085 419 aa24.39■■□□□ 1.5
LYSMD4-209ENST00000496108 RBM43Q6ZSC3 357 aaKnown RBP24.39■■□□□ 1.5
LYSMD4-209ENST00000496108 TTC21AQ8NDW8 1320 aa24.39■■□□□ 1.49
LYSMD4-209ENST00000496108 PAXBP1Q9Y5B6 917 aa24.39■■□□□ 1.49
LYSMD4-209ENST00000496108 PDCP20941 246 aa24.38■■□□□ 1.49
LYSMD4-209ENST00000496108 PLA2G4DQ86XP0 818 aa24.38■■□□□ 1.49
LYSMD4-209ENST00000496108 CHD2O14647 1828 aaKnown RBP24.38■■□□□ 1.49
LYSMD4-209ENST00000496108 CEP170BQ9Y4F5 1589 aaPredicted RBP24.38■■□□□ 1.49
LYSMD4-209ENST00000496108 CCDC186Q7Z3E2 898 aa24.38■■□□□ 1.49
LYSMD4-209ENST00000496108 DDX19AQ9NUU7 478 aaKnown RBP24.38■■□□□ 1.49
LYSMD4-209ENST00000496108 SRGAP3O43295 1099 aa24.37■■□□□ 1.49
LYSMD4-209ENST00000496108 ME3Q16798 604 aa24.37■■□□□ 1.49
LYSMD4-209ENST00000496108 ADCK5Q3MIX3 580 aa24.37■■□□□ 1.49
LYSMD4-209ENST00000496108 LUZP1Q86V48 1076 aa24.37■■□□□ 1.49
LYSMD4-209ENST00000496108 TDRD7Q8NHU6 1098 aaKnown RBP24.37■■□□□ 1.49
LYSMD4-209ENST00000496108 CBX8Q9HC52 389 aa24.37■■□□□ 1.49
LYSMD4-209ENST00000496108 PODXL2Q9NZ53 605 aa24.37■■□□□ 1.49
LYSMD4-209ENST00000496108 GNAT3A8MTJ3 354 aa24.37■■□□□ 1.49
LYSMD4-209ENST00000496108 LIG1P18858 919 aa24.36■■□□□ 1.49
LYSMD4-209ENST00000496108 ZNF75DP51815 510 aa24.36■■□□□ 1.49
LYSMD4-209ENST00000496108 LARP1BQ659C4 914 aaKnown RBP24.36■■□□□ 1.49
LYSMD4-209ENST00000496108 SCAND2PQ9GZW5 306 aaPredicted RBP24.36■■□□□ 1.49
LYSMD4-209ENST00000496108 TNMDQ9H2S6 317 aa24.36■■□□□ 1.49
LYSMD4-209ENST00000496108 CGNQ9P2M7 1197 aaKnown RBP24.36■■□□□ 1.49
LYSMD4-209ENST00000496108 PTH1RQ03431 593 aa24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 PRPF40BQ6NWY9 871 aaKnown RBP24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 NECTIN2Q92692 538 aa24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 CTNNA3Q9UI47 895 aa24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 NPHP3Q7Z494 1330 aa24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 GABPB1Q06547 395 aaPredicted RBP24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 NECTIN1Q15223 517 aa24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 ZSCAN25Q6NSZ9 544 aa24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 EYA1Q99502 592 aa24.35■■□□□ 1.49
LYSMD4-209ENST00000496108 ZKSCAN1P17029 563 aaPredicted RBP24.34■■□□□ 1.49
LYSMD4-209ENST00000496108 ANO6Q4KMQ2 910 aa24.34■■□□□ 1.49
LYSMD4-209ENST00000496108 CDC25BP30305 580 aa24.34■■□□□ 1.49
LYSMD4-209ENST00000496108 TAF3Q5VWG9 929 aa24.34■■□□□ 1.49
LYSMD4-209ENST00000496108 CLSTN2Q9H4D0 955 aa24.34■■□□□ 1.49
LYSMD4-209ENST00000496108 CAVIN2O95810 425 aa24.33■■□□□ 1.49
LYSMD4-209ENST00000496108 TNNT1P13805 278 aa24.33■■□□□ 1.49
LYSMD4-209ENST00000496108 ROBO2Q9HCK4 1378 aa24.33■■□□□ 1.48
LYSMD4-209ENST00000496108 CDC37L1Q7L3B6 337 aa24.33■■□□□ 1.48
LYSMD4-209ENST00000496108 C16orf45Q96MC5 204 aaPredicted RBP24.33■■□□□ 1.48
LYSMD4-209ENST00000496108 DACT1Q9NYF0 836 aa24.33■■□□□ 1.48
LYSMD4-209ENST00000496108 LRMPQ12912 555 aa24.32■■□□□ 1.48
LYSMD4-209ENST00000496108 TAF7Q15545 349 aaPredicted RBP24.32■■□□□ 1.48
LYSMD4-209ENST00000496108 CAMK4Q16566 473 aa24.32■■□□□ 1.48
LYSMD4-209ENST00000496108 HDGFL1Q5TGJ6 251 aa24.32■■□□□ 1.48
LYSMD4-209ENST00000496108 DRC7Q8IY82 874 aa24.32■■□□□ 1.48
LYSMD4-209ENST00000496108 TRIM5Q9C035 493 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms