RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 DDX21Q9NR30 783 aaKnown RBP eCLIP25.96■■□□□ 1.75
COL9A2-210ENST00000495948 ERVV-1B6SEH8 477 aa25.95■■□□□ 1.74
COL9A2-210ENST00000495948 PROSER3Q2NL68 480 aa25.95■■□□□ 1.74
COL9A2-210ENST00000495948 NECTIN2Q92692 538 aa25.94■■□□□ 1.74
COL9A2-210ENST00000495948 CHPF2Q9P2E5 772 aa25.94■■□□□ 1.74
COL9A2-210ENST00000495948 SERPINB2P05120 415 aa25.93■■□□□ 1.74
COL9A2-210ENST00000495948 BICDL1Q6ZP65 573 aa25.93■■□□□ 1.74
COL9A2-210ENST00000495948 TTLL7Q6ZT98 887 aa25.93■■□□□ 1.74
COL9A2-210ENST00000495948 DBF4Q9UBU7 674 aaPredicted RBP25.93■■□□□ 1.74
COL9A2-210ENST00000495948 NUP98P52948 1817 aa25.93■■□□□ 1.74
COL9A2-210ENST00000495948 ANXA1P04083 346 aa25.92■■□□□ 1.74
COL9A2-210ENST00000495948 TGFB2P61812 414 aa25.92■■□□□ 1.74
COL9A2-210ENST00000495948 C8orf58Q8NAV2 365 aa25.92■■□□□ 1.74
COL9A2-210ENST00000495948 CHMP4AQ9BY43 222 aa25.92■■□□□ 1.74
COL9A2-210ENST00000495948 DCAF8L1A6NGE4 600 aa25.91■■□□□ 1.74
COL9A2-210ENST00000495948 SETDB2Q96T68 719 aa25.91■■□□□ 1.74
COL9A2-210ENST00000495948 N4BP2Q86UW6 1770 aaPredicted RBP25.91■■□□□ 1.74
COL9A2-210ENST00000495948 ANKRD36CQ5JPF3 1778 aa25.9■■□□□ 1.74
COL9A2-210ENST00000495948 BRCA1P38398 1863 aaKnown RBP25.9■■□□□ 1.74
COL9A2-210ENST00000495948 HLFQ16534 295 aa25.9■■□□□ 1.74
COL9A2-210ENST00000495948 MYH16Q9H6N6 1097 aa25.9■■□□□ 1.74
COL9A2-210ENST00000495948 DLEC1Q9Y238 1755 aa25.9■■□□□ 1.74
COL9A2-210ENST00000495948 TSPYL6Q8N831 410 aa25.89■■□□□ 1.74
COL9A2-210ENST00000495948 ZBTB3Q9H5J0 574 aa25.89■■□□□ 1.74
COL9A2-210ENST00000495948 ANKRD31Q8N7Z5 1873 aa25.88■■□□□ 1.73
COL9A2-210ENST00000495948 IBTKQ9P2D0 1353 aaPredicted RBP25.88■■□□□ 1.73
COL9A2-210ENST00000495948 ELL2O00472 640 aaPredicted RBP25.88■■□□□ 1.73
COL9A2-210ENST00000495948 GIGYF2Q6Y7W6 1299 aaKnown RBP25.88■■□□□ 1.73
COL9A2-210ENST00000495948 XAGE3Q8WTP9 111 aa25.88■■□□□ 1.73
COL9A2-210ENST00000495948 SPINK5Q9NQ38 1064 aaPredicted RBP25.88■■□□□ 1.73
COL9A2-210ENST00000495948 HYPKQ9NX55 129 aa25.88■■□□□ 1.73
COL9A2-210ENST00000495948 NIP7Q9Y221 180 aaKnown RBP eCLIP25.88■■□□□ 1.73
COL9A2-210ENST00000495948 TWISTNBQ3B726 338 aaPredicted RBP25.87■■□□□ 1.73
COL9A2-210ENST00000495948 CCDC30Q5VVM6 783 aa25.87■■□□□ 1.73
COL9A2-210ENST00000495948 PRR5LQ6MZQ0 368 aa25.87■■□□□ 1.73
COL9A2-210ENST00000495948 CNBD1Q8NA66 436 aa25.87■■□□□ 1.73
COL9A2-210ENST00000495948 GOLGA2Q08379 1002 aa25.86■■□□□ 1.73
COL9A2-210ENST00000495948 COPS6Q7L5N1 327 aa25.86■■□□□ 1.73
COL9A2-210ENST00000495948 ARFGEF2Q9Y6D5 1785 aa25.84■■□□□ 1.73
COL9A2-210ENST00000495948 COL11A2P13942 1736 aaPredicted RBP25.84■■□□□ 1.73
COL9A2-210ENST00000495948 ST5P78524 1137 aa25.83■■□□□ 1.73
COL9A2-210ENST00000495948 AIMP1Q12904 312 aaKnown RBP25.83■■□□□ 1.73
COL9A2-210ENST00000495948 GPR162Q16538 588 aa25.83■■□□□ 1.73
COL9A2-210ENST00000495948 NBPF5PQ86XG9 351 aaPredicted RBP25.83■■□□□ 1.73
COL9A2-210ENST00000495948 UBN2Q6ZU65 1347 aa25.83■■□□□ 1.73
COL9A2-210ENST00000495948 DPEP1P16444 411 aa25.82■■□□□ 1.72
COL9A2-210ENST00000495948 HSP90AB3PQ58FF7 597 aa25.82■■□□□ 1.72
COL9A2-210ENST00000495948 RIC1Q4ADV7 1423 aa25.81■■□□□ 1.72
COL9A2-210ENST00000495948 E9PSI1 815 aa25.81■■□□□ 1.72
COL9A2-210ENST00000495948 YBX3P16989 372 aaKnown RBP eCLIP25.81■■□□□ 1.72
COL9A2-210ENST00000495948 ZNF34Q8IZ26 560 aa25.81■■□□□ 1.72
COL9A2-210ENST00000495948 PELP1Q8IZL8 1130 aaKnown RBP25.81■■□□□ 1.72
COL9A2-210ENST00000495948 A0A0G2JLW4 131 aa25.8■■□□□ 1.72
COL9A2-210ENST00000495948 NPHP1O15259 732 aa25.8■■□□□ 1.72
COL9A2-210ENST00000495948 EXOSC9Q06265 439 aaKnown RBP25.8■■□□□ 1.72
COL9A2-210ENST00000495948 PARP10Q53GL7 1025 aa25.8■■□□□ 1.72
COL9A2-210ENST00000495948 PLBD2Q8NHP8 589 aa25.8■■□□□ 1.72
COL9A2-210ENST00000495948 BRIP1Q9BX63 1249 aa25.8■■□□□ 1.72
COL9A2-210ENST00000495948 STK31Q9BXU1 1019 aa25.8■■□□□ 1.72
COL9A2-210ENST00000495948 NYXQ9GZU5 481 aa25.8■■□□□ 1.72
COL9A2-210ENST00000495948 ARFGEF1Q9Y6D6 1849 aa25.79■■□□□ 1.72
COL9A2-210ENST00000495948 GOLGB1Q14789 3259 aaKnown RBP25.79■■□□□ 1.72
COL9A2-210ENST00000495948 PDZRN3Q9UPQ7 1066 aa25.79■■□□□ 1.72
COL9A2-210ENST00000495948 UTRNP46939 3433 aa25.78■■□□□ 1.72
COL9A2-210ENST00000495948 TNRC6CQ9HCJ0 1690 aaKnown RBP25.78■■□□□ 1.72
COL9A2-210ENST00000495948 KCNA3P22001 575 aa25.78■■□□□ 1.72
COL9A2-210ENST00000495948 GPTP24298 496 aa25.78■■□□□ 1.72
COL9A2-210ENST00000495948 PDE6BP35913 854 aa25.78■■□□□ 1.72
COL9A2-210ENST00000495948 TPTE2Q6XPS3 522 aa25.78■■□□□ 1.72
COL9A2-210ENST00000495948 GRIN3BO60391 1043 aa25.77■■□□□ 1.72
COL9A2-210ENST00000495948 VAMP4O75379 141 aa25.77■■□□□ 1.72
COL9A2-210ENST00000495948 CHRNA5P30532 468 aa25.77■■□□□ 1.72
COL9A2-210ENST00000495948 ANKRD13DQ6ZTN6 518 aa25.77■■□□□ 1.72
COL9A2-210ENST00000495948 PHAXQ9H814 394 aaKnown RBP25.77■■□□□ 1.72
COL9A2-210ENST00000495948 ABCC12Q96J65 1359 aa25.77■■□□□ 1.72
COL9A2-210ENST00000495948 CACNA1FO60840 1977 aa25.76■■□□□ 1.72
COL9A2-210ENST00000495948 RNF123Q5XPI4 1314 aa25.76■■□□□ 1.71
COL9A2-210ENST00000495948 NTSR2O95665 410 aa25.75■■□□□ 1.71
COL9A2-210ENST00000495948 SLFN5Q08AF3 891 aa25.75■■□□□ 1.71
COL9A2-210ENST00000495948 TCIRG1Q13488 830 aa25.75■■□□□ 1.71
COL9A2-210ENST00000495948 CCDC24Q8N4L8 307 aa25.75■■□□□ 1.71
COL9A2-210ENST00000495948 PIM2Q9P1W9 311 aa25.75■■□□□ 1.71
COL9A2-210ENST00000495948 PPP1R42Q7Z4L9 355 aa25.74■■□□□ 1.71
COL9A2-210ENST00000495948 C2CD5Q86YS7 1000 aa25.74■■□□□ 1.71
COL9A2-210ENST00000495948 WWC3Q9ULE0 1092 aa25.74■■□□□ 1.71
COL9A2-210ENST00000495948 FAM177BA6PVY3 158 aa25.73■■□□□ 1.71
COL9A2-210ENST00000495948 H0YIN7 160 aa25.73■■□□□ 1.71
COL9A2-210ENST00000495948 DDX58O95786 925 aaKnown RBP25.73■■□□□ 1.71
COL9A2-210ENST00000495948 SUSD4Q5VX71 490 aa25.73■■□□□ 1.71
COL9A2-210ENST00000495948 CHD4Q14839 1912 aa25.73■■□□□ 1.71
COL9A2-210ENST00000495948 NLRP10Q86W26 655 aa25.72■■□□□ 1.71
COL9A2-210ENST00000495948 BCS1LQ9Y276 419 aa25.72■■□□□ 1.71
COL9A2-210ENST00000495948 KLRG2A4D1S0 409 aaPredicted RBP25.71■■□□□ 1.71
COL9A2-210ENST00000495948 GTF2E1P29083 439 aaPredicted RBP25.71■■□□□ 1.71
COL9A2-210ENST00000495948 DALRD3Q5D0E6 543 aaKnown RBP25.71■■□□□ 1.71
COL9A2-210ENST00000495948 RIC3Q7Z5B4 369 aa25.71■■□□□ 1.71
COL9A2-210ENST00000495948 ISCA1Q9BUE6 129 aa25.71■■□□□ 1.71
COL9A2-210ENST00000495948 TCERG1O14776 1098 aaKnown RBP25.7■■□□□ 1.7
COL9A2-210ENST00000495948 SLC4A2P04920 1241 aa25.7■■□□□ 1.7
COL9A2-210ENST00000495948 NUTM1Q86Y26 1132 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms