RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.81■■□□□ 1.56
ATG3-208ENST00000495756 ARHGEF1Q92888 912 aaKnown RBP24.81■■□□□ 1.56
ATG3-208ENST00000495756 RNF123Q5XPI4 1314 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 PI4KAP2A4QPH2 592 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 PLIN1O60240 522 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 KSR2Q6VAB6 950 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 PI4KAP1Q8N8J0 262 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 PLBD2Q8NHP8 589 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 API5Q9BZZ5 524 aaKnown RBP24.8■■□□□ 1.56
ATG3-208ENST00000495756 ADCY9O60503 1353 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 C4AP0C0L4 1744 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 MAP3K15Q6ZN16 1313 aa24.8■■□□□ 1.56
ATG3-208ENST00000495756 TRIM27P14373 513 aa24.79■■□□□ 1.56
ATG3-208ENST00000495756 ZBTB3Q9H5J0 574 aa24.79■■□□□ 1.56
ATG3-208ENST00000495756 RIC3Q7Z5B4 369 aa24.78■■□□□ 1.56
ATG3-208ENST00000495756 FLAD1Q8NFF5 587 aa24.78■■□□□ 1.56
ATG3-208ENST00000495756 NARFQ9UHQ1 456 aa24.78■■□□□ 1.56
ATG3-208ENST00000495756 QSER1Q2KHR3 1735 aa24.78■■□□□ 1.56
ATG3-208ENST00000495756 ERVV-1B6SEH8 477 aa24.77■■□□□ 1.56
ATG3-208ENST00000495756 F6X3S4 739 aa24.77■■□□□ 1.56
ATG3-208ENST00000495756 RFC4P35249 363 aa24.77■■□□□ 1.56
ATG3-208ENST00000495756 MAP3K2Q9Y2U5 619 aa24.77■■□□□ 1.56
ATG3-208ENST00000495756 PNPLA7Q6ZV29 1317 aa24.77■■□□□ 1.56
ATG3-208ENST00000495756 ARFGEF2Q9Y6D5 1785 aa24.77■■□□□ 1.56
ATG3-208ENST00000495756 CAMTA2O94983 1202 aa24.77■■□□□ 1.56
ATG3-208ENST00000495756 TNNQ9UQP3 1299 aa24.77■■□□□ 1.56
ATG3-208ENST00000495756 COL23A1Q86Y22 540 aaPredicted RBP24.76■■□□□ 1.55
ATG3-208ENST00000495756 DNAAF4Q8WXU2 420 aa24.76■■□□□ 1.55
ATG3-208ENST00000495756 BCORQ6W2J9 1755 aa24.76■■□□□ 1.55
ATG3-208ENST00000495756 USP42Q9H9J4 1324 aaKnown RBP24.75■■□□□ 1.55
ATG3-208ENST00000495756 ZPR1O75312 459 aa24.75■■□□□ 1.55
ATG3-208ENST00000495756 CLUAP1Q96AJ1 413 aa24.75■■□□□ 1.55
ATG3-208ENST00000495756 SRP68Q9UHB9 627 aaKnown RBP24.75■■□□□ 1.55
ATG3-208ENST00000495756 SCN7AQ01118 1682 aa24.75■■□□□ 1.55
ATG3-208ENST00000495756 HLFQ16534 295 aa24.74■■□□□ 1.55
ATG3-208ENST00000495756 ABCC4O15439 1325 aa24.74■■□□□ 1.55
ATG3-208ENST00000495756 RGL2O15211 777 aa24.73■■□□□ 1.55
ATG3-208ENST00000495756 USPL1Q5W0Q7 1092 aa24.73■■□□□ 1.55
ATG3-208ENST00000495756 GIGYF2Q6Y7W6 1299 aaKnown RBP24.73■■□□□ 1.55
ATG3-208ENST00000495756 DZIP1LQ8IYY4 767 aaKnown RBP24.73■■□□□ 1.55
ATG3-208ENST00000495756 METTL22Q9BUU2 404 aaPredicted RBP24.73■■□□□ 1.55
ATG3-208ENST00000495756 MS4A1P11836 297 aa24.72■■□□□ 1.55
ATG3-208ENST00000495756 SLC4A10Q6U841 1118 aa24.72■■□□□ 1.55
ATG3-208ENST00000495756 FTSJ3Q8IY81 847 aaKnown RBP24.72■■□□□ 1.55
ATG3-208ENST00000495756 NUP98P52948 1817 aa24.72■■□□□ 1.55
ATG3-208ENST00000495756 PXDNLA1KZ92 1463 aa24.72■■□□□ 1.55
ATG3-208ENST00000495756 MSH5O43196 834 aa24.71■■□□□ 1.55
ATG3-208ENST00000495756 PDE3AQ14432 1141 aa24.71■■□□□ 1.55
ATG3-208ENST00000495756 CLEC4GQ6UXB4 293 aa24.71■■□□□ 1.55
ATG3-208ENST00000495756 BCL2L12Q9HB09 334 aa24.71■■□□□ 1.55
ATG3-208ENST00000495756 ZNF652Q9Y2D9 606 aa24.71■■□□□ 1.55
ATG3-208ENST00000495756 RLBP1P12271 317 aa24.7■■□□□ 1.55
ATG3-208ENST00000495756 C20orf194Q5TEA3 1177 aa24.7■■□□□ 1.55
ATG3-208ENST00000495756 PANK1Q8TE04 598 aa24.7■■□□□ 1.55
ATG3-208ENST00000495756 NEXNQ0ZGT2 675 aa24.7■■□□□ 1.54
ATG3-208ENST00000495756 TCIRG1Q13488 830 aa24.7■■□□□ 1.54
ATG3-208ENST00000495756 HSP90AB3PQ58FF7 597 aa24.7■■□□□ 1.54
ATG3-208ENST00000495756 MYD88Q99836 296 aa24.7■■□□□ 1.54
ATG3-208ENST00000495756 GYS1P13807 737 aa24.69■■□□□ 1.54
ATG3-208ENST00000495756 BEND3Q5T5X7 828 aa24.69■■□□□ 1.54
ATG3-208ENST00000495756 ATP10DQ9P241 1426 aa24.69■■□□□ 1.54
ATG3-208ENST00000495756 ANKRD36CQ5JPF3 1778 aa24.68■■□□□ 1.54
ATG3-208ENST00000495756 N4BP2Q86UW6 1770 aaPredicted RBP24.68■■□□□ 1.54
ATG3-208ENST00000495756 CCT4P50991 539 aaKnown RBP24.67■■□□□ 1.54
ATG3-208ENST00000495756 INTS3Q68E01 1043 aaKnown RBP24.67■■□□□ 1.54
ATG3-208ENST00000495756 TMEM57Q8N5G2 664 aa24.67■■□□□ 1.54
ATG3-208ENST00000495756 LINS1Q8NG48 757 aa24.67■■□□□ 1.54
ATG3-208ENST00000495756 ATP5J2-PTCD1G3V325 749 aa24.66■■□□□ 1.54
ATG3-208ENST00000495756 IGKV5-2P06315 115 aa24.66■■□□□ 1.54
ATG3-208ENST00000495756 FKBP8Q14318 412 aa24.66■■□□□ 1.54
ATG3-208ENST00000495756 R3HDM1Q15032 1099 aaKnown RBP24.66■■□□□ 1.54
ATG3-208ENST00000495756 ISCA1Q9BUE6 129 aa24.66■■□□□ 1.54
ATG3-208ENST00000495756 SRCIN1Q9C0H9 1055 aa24.66■■□□□ 1.54
ATG3-208ENST00000495756 PDGFDQ9GZP0 370 aaPredicted RBP24.66■■□□□ 1.54
ATG3-208ENST00000495756 ZNF34Q8IZ26 560 aa24.65■■□□□ 1.54
ATG3-208ENST00000495756 NEURL1BA8MQ27 555 aa24.64■■□□□ 1.54
ATG3-208ENST00000495756 GPTP24298 496 aa24.64■■□□□ 1.54
ATG3-208ENST00000495756 TRIM28Q13263 835 aaKnown RBP24.64■■□□□ 1.54
ATG3-208ENST00000495756 CWF19L2Q2TBE0 894 aaKnown RBP24.64■■□□□ 1.54
ATG3-208ENST00000495756 ALDH1L1O75891 902 aa24.64■■□□□ 1.53
ATG3-208ENST00000495756 TBC1D9BQ66K14 1250 aa24.64■■□□□ 1.53
ATG3-208ENST00000495756 NIP7Q9Y221 180 aaKnown RBP eCLIP24.64■■□□□ 1.53
ATG3-208ENST00000495756 AFDNP55196 1824 aaKnown RBP24.63■■□□□ 1.53
ATG3-208ENST00000495756 NLGN1Q8N2Q7 840 aa24.63■■□□□ 1.53
ATG3-208ENST00000495756 COG6Q9Y2V7 657 aa24.63■■□□□ 1.53
ATG3-208ENST00000495756 UBN2Q6ZU65 1347 aa24.62■■□□□ 1.53
ATG3-208ENST00000495756 NLRP10Q86W26 655 aa24.62■■□□□ 1.53
ATG3-208ENST00000495756 ITPRIPQ8IWB1 547 aa24.62■■□□□ 1.53
ATG3-208ENST00000495756 CCDC191Q8NCU4 936 aa24.62■■□□□ 1.53
ATG3-208ENST00000495756 CASZ1Q86V15 1759 aa24.61■■□□□ 1.53
ATG3-208ENST00000495756 PSDA5PKW4 1024 aaPredicted RBP24.61■■□□□ 1.53
ATG3-208ENST00000495756 MVPQ14764 893 aaKnown RBP24.61■■□□□ 1.53
ATG3-208ENST00000495756 BICDL1Q6ZP65 573 aa24.61■■□□□ 1.53
ATG3-208ENST00000495756 SLC16A10Q8TF71 515 aa24.61■■□□□ 1.53
ATG3-208ENST00000495756 CWC25Q9NXE8 425 aaPredicted RBP24.61■■□□□ 1.53
ATG3-208ENST00000495756 GCKRQ14397 625 aa24.6■■□□□ 1.53
ATG3-208ENST00000495756 NFIXQ14938 502 aa24.6■■□□□ 1.53
ATG3-208ENST00000495756 PARP10Q53GL7 1025 aa24.6■■□□□ 1.53
ATG3-208ENST00000495756 SETDB2Q96T68 719 aa24.6■■□□□ 1.53
ATG3-208ENST00000495756 IBTKQ9P2D0 1353 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms