RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 BCORQ6W2J9 1755 aa9.49□□□□□ -0.89
VPS52-221ENST00000495755 ERVV-1B6SEH8 477 aa9.48□□□□□ -0.89
VPS52-221ENST00000495755 LAMB4A4D0S4 1761 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 DLEC1Q9Y238 1755 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 KLRG2A4D1S0 409 aaPredicted RBP9.47□□□□□ -0.89
VPS52-221ENST00000495755 CHL1O00533 1208 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 KIF3CO14782 793 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 SRGNP10124 158 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 ST5P78524 1137 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 NEUROD2Q15784 382 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 TTLL7Q6ZT98 887 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 LRP10Q7Z4F1 713 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 NBPF5PQ86XG9 351 aaPredicted RBP9.47□□□□□ -0.89
VPS52-221ENST00000495755 NGEFQ8N5V2 710 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 NIP7Q9Y221 180 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS52-221ENST00000495755 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
VPS52-221ENST00000495755 MYL6BP14649 208 aa9.46□□□□□ -0.9
VPS52-221ENST00000495755 PRELPP51888 382 aa9.46□□□□□ -0.9
VPS52-221ENST00000495755 PDIA6Q15084 440 aa9.46□□□□□ -0.9
VPS52-221ENST00000495755 STYK1Q6J9G0 422 aa9.46□□□□□ -0.9
VPS52-221ENST00000495755 TPTE2Q6XPS3 522 aa9.46□□□□□ -0.9
VPS52-221ENST00000495755 ZNF622Q969S3 477 aaKnown RBP eCLIP9.46□□□□□ -0.9
VPS52-221ENST00000495755 RNF181Q9P0P0 153 aa9.46□□□□□ -0.9
VPS52-221ENST00000495755 MAP3K15Q6ZN16 1313 aa9.46□□□□□ -0.9
VPS52-221ENST00000495755 NFKBIEO00221 500 aa9.45□□□□□ -0.9
VPS52-221ENST00000495755 NPHP1O15259 732 aa9.45□□□□□ -0.9
VPS52-221ENST00000495755 LMNB1P20700 586 aa9.45□□□□□ -0.9
VPS52-221ENST00000495755 RASSF7Q02833 373 aa9.45□□□□□ -0.9
VPS52-221ENST00000495755 KIF6Q6ZMV9 814 aa9.45□□□□□ -0.9
VPS52-221ENST00000495755 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
VPS52-221ENST00000495755 MASTLQ96GX5 879 aa9.45□□□□□ -0.9
VPS52-221ENST00000495755 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 FAM177BA6PVY3 158 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 C21orf2O43822 256 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 EIF2S2P20042 333 aaKnown RBP9.44□□□□□ -0.9
VPS52-221ENST00000495755 PROSER3Q2NL68 480 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 ZNF34Q8IZ26 560 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 C7orf43Q8WVR3 580 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 ZBTB3Q9H5J0 574 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 NMRK2Q9NPI5 230 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 ZC3H4Q9UPT8 1303 aaKnown RBP9.44□□□□□ -0.9
VPS52-221ENST00000495755 COL11A2P13942 1736 aaPredicted RBP9.44□□□□□ -0.9
VPS52-221ENST00000495755 SBF1O95248 1867 aa9.44□□□□□ -0.9
VPS52-221ENST00000495755 UBN2Q6ZU65 1347 aa9.43□□□□□ -0.9
VPS52-221ENST00000495755 APAF1O14727 1248 aa9.43□□□□□ -0.9
VPS52-221ENST00000495755 ZNF853P0CG23 659 aa9.43□□□□□ -0.9
VPS52-221ENST00000495755 NPR1P16066 1061 aa9.43□□□□□ -0.9
VPS52-221ENST00000495755 KRT24Q2M2I5 525 aa9.43□□□□□ -0.9
VPS52-221ENST00000495755 CCDC184Q52MB2 194 aa9.43□□□□□ -0.9
VPS52-221ENST00000495755 PRPF40BQ6NWY9 871 aaKnown RBP9.43□□□□□ -0.9
VPS52-221ENST00000495755 GIGYF2Q6Y7W6 1299 aaKnown RBP9.43□□□□□ -0.9
VPS52-221ENST00000495755 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
VPS52-221ENST00000495755 NYXQ9GZU5 481 aa9.43□□□□□ -0.9
VPS52-221ENST00000495755 ZNF219Q9P2Y4 722 aaPredicted RBP9.43□□□□□ -0.9
VPS52-221ENST00000495755 LAS1LQ9Y4W2 734 aaKnown RBP9.43□□□□□ -0.9
VPS52-221ENST00000495755 KDM2BQ8NHM5 1336 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
VPS52-221ENST00000495755 TOMM70O94826 608 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 ANXA1P04083 346 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 GPTP24298 496 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 GTF2E1P29083 439 aaPredicted RBP9.42□□□□□ -0.9
VPS52-221ENST00000495755 CRY2Q49AN0 593 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 ERFEQ4G0M1 354 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 SUSD4Q5VX71 490 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 COPS6Q7L5N1 327 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 DDX21Q9NR30 783 aaKnown RBP eCLIP9.42□□□□□ -0.9
VPS52-221ENST00000495755 NUP98P52948 1817 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 SLX4Q8IY92 1834 aa9.42□□□□□ -0.9
VPS52-221ENST00000495755 RIC1Q4ADV7 1423 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 ABCC12Q96J65 1359 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 IBTKQ9P2D0 1353 aaPredicted RBP9.41□□□□□ -0.9
VPS52-221ENST00000495755 GLTPD2A6NH11 291 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 NTSR2O95665 410 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 HOXB7P09629 217 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 SOGA3Q5TF21 947 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 NUTM1Q86Y26 1132 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 XAGE3Q8WTP9 111 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 RRAGCQ9HB90 399 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 MBIPQ9NS73 344 aa9.41□□□□□ -0.9
VPS52-221ENST00000495755 HSPA6P17066 643 aa9.4□□□□□ -0.9
VPS52-221ENST00000495755 ALDH1B1P30837 517 aa9.4□□□□□ -0.9
VPS52-221ENST00000495755 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.9
VPS52-221ENST00000495755 PARP10Q53GL7 1025 aa9.4□□□□□ -0.9
VPS52-221ENST00000495755 SLC10A5Q5PT55 438 aa9.4□□□□□ -0.9
VPS52-221ENST00000495755 HDGFL1Q5TGJ6 251 aa9.4□□□□□ -0.9
VPS52-221ENST00000495755 TAOK3Q9H2K8 898 aa9.4□□□□□ -0.9
VPS52-221ENST00000495755 IFT57Q9NWB7 429 aa9.4□□□□□ -0.9
VPS52-221ENST00000495755 CHPF2Q9P2E5 772 aa9.4□□□□□ -0.9
VPS52-221ENST00000495755 FER1L6Q2WGJ9 1857 aa9.4□□□□□ -0.91
VPS52-221ENST00000495755 ARFGEF2Q9Y6D5 1785 aa9.4□□□□□ -0.91
VPS52-221ENST00000495755 GNAI1P63096 354 aa9.39□□□□□ -0.91
VPS52-221ENST00000495755 CALD1Q05682 793 aaKnown RBP9.39□□□□□ -0.91
VPS52-221ENST00000495755 AIMP1Q12904 312 aaKnown RBP9.39□□□□□ -0.91
VPS52-221ENST00000495755 TCIRG1Q13488 830 aa9.39□□□□□ -0.91
VPS52-221ENST00000495755 CCDC93Q567U6 631 aa9.39□□□□□ -0.91
VPS52-221ENST00000495755 DUSP27Q5VZP5 1158 aa9.39□□□□□ -0.91
VPS52-221ENST00000495755 OLFM4Q6UX06 510 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms