RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 BRIP1Q9BX63 1249 aa23.49■■□□□ 1.35
COL20A1-207ENST00000494913 RGL2O15211 777 aa23.48■■□□□ 1.35
COL20A1-207ENST00000494913 KRT24Q2M2I5 525 aa23.48■■□□□ 1.35
COL20A1-207ENST00000494913 TTLL7Q6ZT98 887 aa23.48■■□□□ 1.35
COL20A1-207ENST00000494913 NBPF5PQ86XG9 351 aaPredicted RBP23.48■■□□□ 1.35
COL20A1-207ENST00000494913 MRS2Q9HD23 443 aa23.48■■□□□ 1.35
COL20A1-207ENST00000494913 NIP7Q9Y221 180 aaKnown RBP eCLIP23.48■■□□□ 1.35
COL20A1-207ENST00000494913 ERBB4Q15303 1308 aa23.47■■□□□ 1.35
COL20A1-207ENST00000494913 PDE6BP35913 854 aa23.47■■□□□ 1.35
COL20A1-207ENST00000494913 KIF6Q6ZMV9 814 aa23.47■■□□□ 1.35
COL20A1-207ENST00000494913 NECTIN2Q92692 538 aa23.47■■□□□ 1.35
COL20A1-207ENST00000494913 CFAP44Q96MT7 982 aa23.47■■□□□ 1.35
COL20A1-207ENST00000494913 ERVV-1B6SEH8 477 aa23.46■■□□□ 1.35
COL20A1-207ENST00000494913 ST5P78524 1137 aa23.46■■□□□ 1.35
COL20A1-207ENST00000494913 PDIA6Q15084 440 aa23.45■■□□□ 1.34
COL20A1-207ENST00000494913 MAP3K15Q6ZN16 1313 aa23.45■■□□□ 1.34
COL20A1-207ENST00000494913 FAM177BA6PVY3 158 aa23.44■■□□□ 1.34
COL20A1-207ENST00000494913 TTLL6Q8N841 843 aa23.44■■□□□ 1.34
COL20A1-207ENST00000494913 ANXA1P04083 346 aa23.43■■□□□ 1.34
COL20A1-207ENST00000494913 PROSER3Q2NL68 480 aa23.43■■□□□ 1.34
COL20A1-207ENST00000494913 TPTE2Q6XPS3 522 aa23.43■■□□□ 1.34
COL20A1-207ENST00000494913 ZBTB3Q9H5J0 574 aa23.43■■□□□ 1.34
COL20A1-207ENST00000494913 PDZRN3Q9UPQ7 1066 aa23.43■■□□□ 1.34
COL20A1-207ENST00000494913 SENP3-EIF4A1A0A087X0R7 540 aa23.43■■□□□ 1.34
COL20A1-207ENST00000494913 CALD1Q05682 793 aaKnown RBP23.43■■□□□ 1.34
COL20A1-207ENST00000494913 ZNF622Q969S3 477 aaKnown RBP eCLIP23.43■■□□□ 1.34
COL20A1-207ENST00000494913 MBIPQ9NS73 344 aa23.43■■□□□ 1.34
COL20A1-207ENST00000494913 ARFGEF1Q9Y6D6 1849 aa23.43■■□□□ 1.34
COL20A1-207ENST00000494913 ATP10DQ9P241 1426 aa23.42■■□□□ 1.34
COL20A1-207ENST00000494913 ZNF853P0CG23 659 aa23.42■■□□□ 1.34
COL20A1-207ENST00000494913 LRP10Q7Z4F1 713 aa23.42■■□□□ 1.34
COL20A1-207ENST00000494913 ANKRD31Q8N7Z5 1873 aa23.41■■□□□ 1.34
COL20A1-207ENST00000494913 IFT57Q9NWB7 429 aa23.41■■□□□ 1.34
COL20A1-207ENST00000494913 ADCY9O60503 1353 aa23.41■■□□□ 1.34
COL20A1-207ENST00000494913 GNAI1P63096 354 aa23.4■■□□□ 1.34
COL20A1-207ENST00000494913 GTF2E1P29083 439 aaPredicted RBP23.39■■□□□ 1.34
COL20A1-207ENST00000494913 GPTP24298 496 aa23.38■■□□□ 1.33
COL20A1-207ENST00000494913 AIMP1Q12904 312 aaKnown RBP23.38■■□□□ 1.33
COL20A1-207ENST00000494913 HDGFL1Q5TGJ6 251 aa23.38■■□□□ 1.33
COL20A1-207ENST00000494913 DUSP27Q5VZP5 1158 aa23.38■■□□□ 1.33
COL20A1-207ENST00000494913 ZNF526Q8TF50 670 aaPredicted RBP23.38■■□□□ 1.33
COL20A1-207ENST00000494913 DDX21Q9NR30 783 aaKnown RBP eCLIP23.38■■□□□ 1.33
COL20A1-207ENST00000494913 DLEC1Q9Y238 1755 aa23.38■■□□□ 1.33
COL20A1-207ENST00000494913 NUP98P52948 1817 aa23.38■■□□□ 1.33
COL20A1-207ENST00000494913 HOXB7P09629 217 aa23.37■■□□□ 1.33
COL20A1-207ENST00000494913 SRGNP10124 158 aa23.37■■□□□ 1.33
COL20A1-207ENST00000494913 GIGYF2Q6Y7W6 1299 aaKnown RBP23.37■■□□□ 1.33
COL20A1-207ENST00000494913 COPS6Q7L5N1 327 aa23.37■■□□□ 1.33
COL20A1-207ENST00000494913 C9orf131Q5VYM1 1079 aa23.36■■□□□ 1.33
COL20A1-207ENST00000494913 XAGE3Q8WTP9 111 aa23.36■■□□□ 1.33
COL20A1-207ENST00000494913 NYXQ9GZU5 481 aa23.36■■□□□ 1.33
COL20A1-207ENST00000494913 GPBP1L1Q9HC44 474 aaPredicted RBP23.36■■□□□ 1.33
COL20A1-207ENST00000494913 CHPF2Q9P2E5 772 aa23.36■■□□□ 1.33
COL20A1-207ENST00000494913 STYK1Q6J9G0 422 aa23.36■■□□□ 1.33
COL20A1-207ENST00000494913 ZNF34Q8IZ26 560 aa23.36■■□□□ 1.33
COL20A1-207ENST00000494913 MASTLQ96GX5 879 aa23.36■■□□□ 1.33
COL20A1-207ENST00000494913 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
COL20A1-207ENST00000494913 UBN2Q6ZU65 1347 aa23.35■■□□□ 1.33
COL20A1-207ENST00000494913 NUTM1Q86Y26 1132 aa23.35■■□□□ 1.33
COL20A1-207ENST00000494913 CNKSR1Q969H4 720 aa23.35■■□□□ 1.33
COL20A1-207ENST00000494913 ELL2O00472 640 aaPredicted RBP23.34■■□□□ 1.33
COL20A1-207ENST00000494913 CCDC27Q2M243 656 aa23.34■■□□□ 1.33
COL20A1-207ENST00000494913 SUSD4Q5VX71 490 aa23.34■■□□□ 1.33
COL20A1-207ENST00000494913 COL11A2P13942 1736 aaPredicted RBP23.33■■□□□ 1.33
COL20A1-207ENST00000494913 KLRG2A4D1S0 409 aaPredicted RBP23.33■■□□□ 1.33
COL20A1-207ENST00000494913 C21orf2O43822 256 aa23.33■■□□□ 1.33
COL20A1-207ENST00000494913 WWC1Q8IX03 1113 aa23.33■■□□□ 1.33
COL20A1-207ENST00000494913 RNF181Q9P0P0 153 aa23.33■■□□□ 1.33
COL20A1-207ENST00000494913 DBF4Q9UBU7 674 aaPredicted RBP23.33■■□□□ 1.33
COL20A1-207ENST00000494913 NPR1P16066 1061 aa23.32■■□□□ 1.32
COL20A1-207ENST00000494913 RASSF7Q02833 373 aa23.32■■□□□ 1.32
COL20A1-207ENST00000494913 ERFEQ4G0M1 354 aa23.32■■□□□ 1.32
COL20A1-207ENST00000494913 PRPF40BQ6NWY9 871 aaKnown RBP23.31■■□□□ 1.32
COL20A1-207ENST00000494913 PARP10Q53GL7 1025 aa23.3■■□□□ 1.32
COL20A1-207ENST00000494913 PPP1R42Q7Z4L9 355 aa23.3■■□□□ 1.32
COL20A1-207ENST00000494913 FAM9BQ8IZU0 186 aa23.3■■□□□ 1.32
COL20A1-207ENST00000494913 C8orf58Q8NAV2 365 aa23.3■■□□□ 1.32
COL20A1-207ENST00000494913 SALL2Q9Y467 1007 aaPredicted RBP23.3■■□□□ 1.32
COL20A1-207ENST00000494913 HYPKQ9NX55 129 aa23.3■■□□□ 1.32
COL20A1-207ENST00000494913 ABCC12Q96J65 1359 aa23.29■■□□□ 1.32
COL20A1-207ENST00000494913 NTSR2O95665 410 aa23.29■■□□□ 1.32
COL20A1-207ENST00000494913 HSP90AB3PQ58FF7 597 aa23.29■■□□□ 1.32
COL20A1-207ENST00000494913 TSR2Q969E8 191 aaKnown RBP23.29■■□□□ 1.32
COL20A1-207ENST00000494913 NFKBIEO00221 500 aa23.28■■□□□ 1.32
COL20A1-207ENST00000494913 LMNB1P20700 586 aa23.28■■□□□ 1.32
COL20A1-207ENST00000494913 C1QTNF8P60827 252 aa23.28■■□□□ 1.32
COL20A1-207ENST00000494913 TCIRG1Q13488 830 aa23.28■■□□□ 1.32
COL20A1-207ENST00000494913 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
COL20A1-207ENST00000494913 ANKRD13DQ6ZTN6 518 aa23.28■■□□□ 1.32
COL20A1-207ENST00000494913 UTP14AQ9BVJ6 771 aaKnown RBP23.28■■□□□ 1.32
COL20A1-207ENST00000494913 IBTKQ9P2D0 1353 aaPredicted RBP23.28■■□□□ 1.32
COL20A1-207ENST00000494913 SLX4Q8IY92 1834 aa23.27■■□□□ 1.32
COL20A1-207ENST00000494913 PRELPP51888 382 aa23.27■■□□□ 1.32
COL20A1-207ENST00000494913 PLBD2Q8NHP8 589 aa23.27■■□□□ 1.32
COL20A1-207ENST00000494913 SBF1O95248 1867 aa23.27■■□□□ 1.31
COL20A1-207ENST00000494913 TSPYL6Q8N831 410 aa23.26■■□□□ 1.31
COL20A1-207ENST00000494913 ALDH1B1P30837 517 aa23.25■■□□□ 1.31
COL20A1-207ENST00000494913 CRY2Q49AN0 593 aa23.25■■□□□ 1.31
COL20A1-207ENST00000494913 NLRP10Q86W26 655 aa23.25■■□□□ 1.31
COL20A1-207ENST00000494913 SOGA3Q5TF21 947 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms