RNA–Protein interactions for RNA: ENST00000494727.1

ACSS2-223, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 2

Gene ACSS2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-223	ENST00000494727	COL5A3	P25940	1745 aa	Predicted RBP	13.14	□□□□□ -0.31
ACSS2-223	ENST00000494727	TMEM92	Q6UXU6	159 aa		13.14	□□□□□ -0.31
ACSS2-223	ENST00000494727	FLAD1	Q8NFF5	587 aa		13.14	□□□□□ -0.31
ACSS2-223	ENST00000494727	CNTNAP4	Q9C0A0	1308 aa		13.13	□□□□□ -0.31
ACSS2-223	ENST00000494727	MAPK8IP3	Q9UPT6	1336 aa		13.13	□□□□□ -0.31
ACSS2-223	ENST00000494727	HMGB2	P26583	209 aa	Known RBP	13.13	□□□□□ -0.31
ACSS2-223	ENST00000494727	SYT17	Q9BSW7	474 aa		13.13	□□□□□ -0.31
ACSS2-223	ENST00000494727	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.12	□□□□□ -0.31
ACSS2-223	ENST00000494727	BTBD11	A6QL63	1104 aa		13.12	□□□□□ -0.31
ACSS2-223	ENST00000494727	KCNQ3	O43525	872 aa		13.12	□□□□□ -0.31
ACSS2-223	ENST00000494727	CCDC146	Q8IYE0	955 aa		13.12	□□□□□ -0.31
ACSS2-223	ENST00000494727	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.12	□□□□□ -0.31
ACSS2-223	ENST00000494727	TSHZ2	Q9NRE2	1034 aa		13.12	□□□□□ -0.31
ACSS2-223	ENST00000494727	CEMIP	Q8WUJ3	1361 aa		13.11	□□□□□ -0.31
ACSS2-223	ENST00000494727	TRAPPC3L	Q5T215	181 aa		13.11	□□□□□ -0.31
ACSS2-223	ENST00000494727	SLAIN1	Q8ND83	568 aa		13.11	□□□□□ -0.31
ACSS2-223	ENST00000494727	NLGN2	Q8NFZ4	835 aa		13.11	□□□□□ -0.31
ACSS2-223	ENST00000494727	ARHGEF1	Q92888	912 aa	Known RBP	13.11	□□□□□ -0.31
ACSS2-223	ENST00000494727	THUMPD2	Q9BTF0	503 aa	Known RBP	13.11	□□□□□ -0.31
ACSS2-223	ENST00000494727	SRP68	Q9UHB9	627 aa	Known RBP	13.11	□□□□□ -0.31
ACSS2-223	ENST00000494727	ZNF831	Q5JPB2	1677 aa		13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	RPS6KA4	O75676	772 aa		13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	RFC4	P35249	363 aa		13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	WDR43	Q15061	677 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	ZNF790	Q6PG37	636 aa		13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	ZNF496	Q96IT1	587 aa	Predicted RBP	13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	PLEKHF1	Q96S99	279 aa		13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	CCDC87	Q9NVE4	849 aa		13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	WWC3	Q9ULE0	1092 aa		13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	ZBTB1	Q9Y2K1	713 aa		13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.1	□□□□□ -0.31
ACSS2-223	ENST00000494727	CANX	P27824	592 aa	Known RBP	13.09	□□□□□ -0.31
ACSS2-223	ENST00000494727	NFE2L2	Q16236	605 aa		13.09	□□□□□ -0.31
ACSS2-223	ENST00000494727	RC3H1	Q5TC82	1133 aa	Known RBP	13.09	□□□□□ -0.31
ACSS2-223	ENST00000494727	MIS18A	Q9NYP9	233 aa		13.09	□□□□□ -0.31
ACSS2-223	ENST00000494727	RRP7A	Q9Y3A4	280 aa	Known RBP	13.09	□□□□□ -0.31
ACSS2-223	ENST00000494727	SIPA1L3	O60292	1781 aa	Predicted RBP	13.09	□□□□□ -0.31
ACSS2-223	ENST00000494727	HEG1	Q9ULI3	1381 aa		13.08	□□□□□ -0.31
ACSS2-223	ENST00000494727	C4A	P0C0L4	1744 aa		13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	UBR2	Q8IWV8	1755 aa		13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	KIF3C	O14782	793 aa		13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	CYP19A1	P11511	503 aa	Predicted RBP	13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	NEUROD2	Q15784	382 aa		13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	INTS5	Q6P9B9	1019 aa	Known RBP	13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	FMNL2	Q96PY5	1086 aa		13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	CRISPLD2	Q9H0B8	497 aa		13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	CIC	Q96RK0	1608 aa	Predicted RBP	13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	COL24A1	Q17RW2	1714 aa		13.08	□□□□□ -0.32
ACSS2-223	ENST00000494727	PRAMEF22	A3QJZ6	481 aa		13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	C2orf72	A6NCS6	295 aa		13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	MMP10	P09238	476 aa		13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	PIP4K2A	P48426	406 aa	Predicted RBP	13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	TMC2	Q8TDI7	906 aa		13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	PNN	Q9H307	717 aa	Known RBP	13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	SOS1	Q07889	1333 aa	Predicted RBP	13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	MYH14	Q7Z406	1995 aa	Known RBP	13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	COL15A1	P39059	1388 aa		13.07	□□□□□ -0.32
ACSS2-223	ENST00000494727	GYS1	P13807	737 aa		13.06	□□□□□ -0.32
ACSS2-223	ENST00000494727	GPHN	Q9NQX3	736 aa	Predicted RBP	13.06	□□□□□ -0.32
ACSS2-223	ENST00000494727	SENP3-EIF4A1	A0A087X0R7	540 aa		13.05	□□□□□ -0.32
ACSS2-223	ENST00000494727	RIPK4	P57078	832 aa		13.05	□□□□□ -0.32
ACSS2-223	ENST00000494727	GPR162	Q16538	588 aa		13.05	□□□□□ -0.32
ACSS2-223	ENST00000494727	VSIG10	Q8N0Z9	540 aa		13.05	□□□□□ -0.32
ACSS2-223	ENST00000494727	USP42	Q9H9J4	1324 aa	Known RBP	13.05	□□□□□ -0.32
ACSS2-223	ENST00000494727	DLG5	Q8TDM6	1919 aa		13.04	□□□□□ -0.32
ACSS2-223	ENST00000494727	HTATSF1	O43719	755 aa	Known RBP	13.04	□□□□□ -0.32
ACSS2-223	ENST00000494727	ZPR1	O75312	459 aa		13.04	□□□□□ -0.32
ACSS2-223	ENST00000494727	STARD3NL	O95772	234 aa		13.04	□□□□□ -0.32
ACSS2-223	ENST00000494727	PDE4A	P27815	886 aa		13.04	□□□□□ -0.32
ACSS2-223	ENST00000494727	USPL1	Q5W0Q7	1092 aa		13.04	□□□□□ -0.32
ACSS2-223	ENST00000494727	ADAMTS8	Q9UP79	889 aa		13.04	□□□□□ -0.32
ACSS2-223	ENST00000494727	A1BG	P04217	495 aa		13.03	□□□□□ -0.32
ACSS2-223	ENST00000494727	TMPO	P42166	694 aa	Known RBP	13.03	□□□□□ -0.32
ACSS2-223	ENST00000494727	TAF7	Q15545	349 aa	Predicted RBP	13.03	□□□□□ -0.32
ACSS2-223	ENST00000494727	CCDC184	Q52MB2	194 aa		13.03	□□□□□ -0.32
ACSS2-223	ENST00000494727	PARP3	Q9Y6F1	533 aa		13.03	□□□□□ -0.32
ACSS2-223	ENST00000494727	ANP32C	O43423	234 aa		13.02	□□□□□ -0.33
ACSS2-223	ENST00000494727	BICDL1	Q6ZP65	573 aa		13.02	□□□□□ -0.33
ACSS2-223	ENST00000494727	NLGN1	Q8N2Q7	840 aa		13.02	□□□□□ -0.33
ACSS2-223	ENST00000494727	USP16	Q9Y5T5	823 aa		13.02	□□□□□ -0.33
ACSS2-223	ENST00000494727	YY1	P25490	414 aa		13.01	□□□□□ -0.33
ACSS2-223	ENST00000494727	DDR1	Q08345	913 aa		13.01	□□□□□ -0.33
ACSS2-223	ENST00000494727	RUNDC1	Q96C34	613 aa		13.01	□□□□□ -0.33
ACSS2-223	ENST00000494727	TSPYL4	Q9UJ04	414 aa		13.01	□□□□□ -0.33
ACSS2-223	ENST00000494727	TBC1D2B	Q9UPU7	963 aa		13.01	□□□□□ -0.33
ACSS2-223	ENST00000494727	LAS1L	Q9Y4W2	734 aa	Known RBP	13.01	□□□□□ -0.33
ACSS2-223	ENST00000494727	SNRPA1	P09661	255 aa	Known RBP	13	□□□□□ -0.33
ACSS2-223	ENST00000494727	LMOD3	Q0VAK6	560 aa		13	□□□□□ -0.33
ACSS2-223	ENST00000494727	NPM2	Q86SE8	214 aa	Known RBP	13	□□□□□ -0.33
ACSS2-223	ENST00000494727	TEX13A	Q9BXU3	409 aa	Predicted RBP	13	□□□□□ -0.33
ACSS2-223	ENST00000494727	CD2AP	Q9Y5K6	639 aa		13	□□□□□ -0.33
ACSS2-223	ENST00000494727	C10orf71	Q711Q0	1435 aa		12.99	□□□□□ -0.33
ACSS2-223	ENST00000494727	YBX3	P16989	372 aa	Known RBP eCLIP	12.99	□□□□□ -0.33	1e-6	■□□□□ 10.8
ACSS2-223	ENST00000494727	PNISR	Q8TF01	805 aa	Known RBP	12.99	□□□□□ -0.33
ACSS2-223	ENST00000494727	LARP6	Q9BRS8	491 aa	Known RBP	12.99	□□□□□ -0.33
ACSS2-223	ENST00000494727	MRS2	Q9HD23	443 aa		12.99	□□□□□ -0.33
ACSS2-223	ENST00000494727	NARF	Q9UHQ1	456 aa		12.99	□□□□□ -0.33
ACSS2-223	ENST00000494727	KDM3B	Q7LBC6	1761 aa		12.99	□□□□□ -0.33
ACSS2-223	ENST00000494727	EIF5	P55010	431 aa	Known RBP	12.98	□□□□□ -0.33
ACSS2-223	ENST00000494727	FOXK1	P85037	733 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms