RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 LAS1LQ9Y4W2 734 aaKnown RBP20.45■□□□□ 0.86
LIMS2-216ENST00000494613 ERVV-1B6SEH8 477 aa20.44■□□□□ 0.86
LIMS2-216ENST00000494613 TPTE2Q6XPS3 522 aa20.44■□□□□ 0.86
LIMS2-216ENST00000494613 TTLL7Q6ZT98 887 aa20.44■□□□□ 0.86
LIMS2-216ENST00000494613 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
LIMS2-216ENST00000494613 NIP7Q9Y221 180 aaKnown RBP eCLIP20.44■□□□□ 0.86
LIMS2-216ENST00000494613 ADCY9O60503 1353 aa20.44■□□□□ 0.86
LIMS2-216ENST00000494613 NRXN2Q9P2S2 1712 aa20.44■□□□□ 0.86
LIMS2-216ENST00000494613 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
LIMS2-216ENST00000494613 C9orf131Q5VYM1 1079 aa20.43■□□□□ 0.86
LIMS2-216ENST00000494613 APAF1O14727 1248 aa20.42■□□□□ 0.86
LIMS2-216ENST00000494613 ST5P78524 1137 aa20.42■□□□□ 0.86
LIMS2-216ENST00000494613 PDIA6Q15084 440 aa20.42■□□□□ 0.86
LIMS2-216ENST00000494613 FAM177BA6PVY3 158 aa20.41■□□□□ 0.86
LIMS2-216ENST00000494613 BRCA1P38398 1863 aaKnown RBP20.41■□□□□ 0.86
LIMS2-216ENST00000494613 SRGNP10124 158 aa20.4■□□□□ 0.86
LIMS2-216ENST00000494613 MAP3K15Q6ZN16 1313 aa20.4■□□□□ 0.86
LIMS2-216ENST00000494613 KDM3BQ7LBC6 1761 aa20.4■□□□□ 0.86
LIMS2-216ENST00000494613 ERBB4Q15303 1308 aa20.39■□□□□ 0.85
LIMS2-216ENST00000494613 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
LIMS2-216ENST00000494613 KIF6Q6ZMV9 814 aa20.39■□□□□ 0.85
LIMS2-216ENST00000494613 LRP10Q7Z4F1 713 aa20.39■□□□□ 0.85
LIMS2-216ENST00000494613 NECTIN2Q92692 538 aa20.39■□□□□ 0.85
LIMS2-216ENST00000494613 STYK1Q6J9G0 422 aa20.38■□□□□ 0.85
LIMS2-216ENST00000494613 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
LIMS2-216ENST00000494613 ZBTB3Q9H5J0 574 aa20.38■□□□□ 0.85
LIMS2-216ENST00000494613 RNF181Q9P0P0 153 aa20.38■□□□□ 0.85
LIMS2-216ENST00000494613 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
LIMS2-216ENST00000494613 KLRG2A4D1S0 409 aaPredicted RBP20.37■□□□□ 0.85
LIMS2-216ENST00000494613 C21orf2O43822 256 aa20.37■□□□□ 0.85
LIMS2-216ENST00000494613 ANXA1P04083 346 aa20.37■□□□□ 0.85
LIMS2-216ENST00000494613 GTF2E1P29083 439 aaPredicted RBP20.37■□□□□ 0.85
LIMS2-216ENST00000494613 PROSER3Q2NL68 480 aa20.37■□□□□ 0.85
LIMS2-216ENST00000494613 CNKSR1Q969H4 720 aa20.37■□□□□ 0.85
LIMS2-216ENST00000494613 MASTLQ96GX5 879 aa20.37■□□□□ 0.85
LIMS2-216ENST00000494613 SCN7AQ01118 1682 aa20.37■□□□□ 0.85
LIMS2-216ENST00000494613 RASSF7Q02833 373 aa20.36■□□□□ 0.85
LIMS2-216ENST00000494613 GIGYF2Q6Y7W6 1299 aaKnown RBP20.36■□□□□ 0.85
LIMS2-216ENST00000494613 ZNF34Q8IZ26 560 aa20.36■□□□□ 0.85
LIMS2-216ENST00000494613 ARFGEF1Q9Y6D6 1849 aa20.36■□□□□ 0.85
LIMS2-216ENST00000494613 GPTP24298 496 aa20.35■□□□□ 0.85
LIMS2-216ENST00000494613 PRELPP51888 382 aa20.35■□□□□ 0.85
LIMS2-216ENST00000494613 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
LIMS2-216ENST00000494613 KIF3CO14782 793 aa20.34■□□□□ 0.85
LIMS2-216ENST00000494613 ZNF853P0CG23 659 aa20.34■□□□□ 0.85
LIMS2-216ENST00000494613 SUSD4Q5VX71 490 aa20.34■□□□□ 0.85
LIMS2-216ENST00000494613 NYXQ9GZU5 481 aa20.34■□□□□ 0.85
LIMS2-216ENST00000494613 ANP32CO43423 234 aa20.33■□□□□ 0.85
LIMS2-216ENST00000494613 NPR1P16066 1061 aa20.33■□□□□ 0.85
LIMS2-216ENST00000494613 LMNB1P20700 586 aa20.33■□□□□ 0.85
LIMS2-216ENST00000494613 AIMP1Q12904 312 aaKnown RBP20.33■□□□□ 0.85
LIMS2-216ENST00000494613 NUTM1Q86Y26 1132 aa20.33■□□□□ 0.85
LIMS2-216ENST00000494613 DDX21Q9NR30 783 aaKnown RBP eCLIP20.33■□□□□ 0.85
LIMS2-216ENST00000494613 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
LIMS2-216ENST00000494613 BCORQ6W2J9 1755 aa20.33■□□□□ 0.84
LIMS2-216ENST00000494613 ANKRD31Q8N7Z5 1873 aa20.33■□□□□ 0.84
LIMS2-216ENST00000494613 NFKBIEO00221 500 aa20.32■□□□□ 0.84
LIMS2-216ENST00000494613 ERFEQ4G0M1 354 aa20.32■□□□□ 0.84
LIMS2-216ENST00000494613 PRPF40BQ6NWY9 871 aaKnown RBP20.32■□□□□ 0.84
LIMS2-216ENST00000494613 XAGE3Q8WTP9 111 aa20.32■□□□□ 0.84
LIMS2-216ENST00000494613 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
LIMS2-216ENST00000494613 C7orf43Q8WVR3 580 aa20.31■□□□□ 0.84
LIMS2-216ENST00000494613 UBN2Q6ZU65 1347 aa20.3■□□□□ 0.84
LIMS2-216ENST00000494613 GNAI1P63096 354 aa20.3■□□□□ 0.84
LIMS2-216ENST00000494613 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
LIMS2-216ENST00000494613 NMRK2Q9NPI5 230 aa20.3■□□□□ 0.84
LIMS2-216ENST00000494613 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
LIMS2-216ENST00000494613 LAMB4A4D0S4 1761 aa20.3■□□□□ 0.84
LIMS2-216ENST00000494613 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
LIMS2-216ENST00000494613 HOXB7P09629 217 aa20.29■□□□□ 0.84
LIMS2-216ENST00000494613 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
LIMS2-216ENST00000494613 HDGFL1Q5TGJ6 251 aa20.29■□□□□ 0.84
LIMS2-216ENST00000494613 PPP1R42Q7Z4L9 355 aa20.29■□□□□ 0.84
LIMS2-216ENST00000494613 CHPF2Q9P2E5 772 aa20.29■□□□□ 0.84
LIMS2-216ENST00000494613 ELL2O00472 640 aaPredicted RBP20.28■□□□□ 0.84
LIMS2-216ENST00000494613 PARP10Q53GL7 1025 aa20.28■□□□□ 0.84
LIMS2-216ENST00000494613 RRAGCQ9HB90 399 aa20.28■□□□□ 0.84
LIMS2-216ENST00000494613 MRS2Q9HD23 443 aa20.28■□□□□ 0.84
LIMS2-216ENST00000494613 DBF4Q9UBU7 674 aaPredicted RBP20.28■□□□□ 0.84
LIMS2-216ENST00000494613 SBF1O95248 1867 aa20.27■□□□□ 0.84
LIMS2-216ENST00000494613 DLEC1Q9Y238 1755 aa20.27■□□□□ 0.84
LIMS2-216ENST00000494613 TCIRG1Q13488 830 aa20.27■□□□□ 0.84
LIMS2-216ENST00000494613 NUP98P52948 1817 aa20.27■□□□□ 0.84
LIMS2-216ENST00000494613 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.83
LIMS2-216ENST00000494613 NTSR2O95665 410 aa20.26■□□□□ 0.83
LIMS2-216ENST00000494613 CRY2Q49AN0 593 aa20.26■□□□□ 0.83
LIMS2-216ENST00000494613 SLC10A5Q5PT55 438 aa20.26■□□□□ 0.83
LIMS2-216ENST00000494613 SOGA3Q5TF21 947 aa20.26■□□□□ 0.83
LIMS2-216ENST00000494613 ANKRD13DQ6ZTN6 518 aa20.26■□□□□ 0.83
LIMS2-216ENST00000494613 UTP14AQ9BVJ6 771 aaKnown RBP20.26■□□□□ 0.83
LIMS2-216ENST00000494613 SLX4Q8IY92 1834 aa20.25■□□□□ 0.83
LIMS2-216ENST00000494613 GLTPD2A6NH11 291 aa20.25■□□□□ 0.83
LIMS2-216ENST00000494613 TOMM70O94826 608 aa20.25■□□□□ 0.83
LIMS2-216ENST00000494613 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
LIMS2-216ENST00000494613 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
LIMS2-216ENST00000494613 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
LIMS2-216ENST00000494613 HOXA10P31260 410 aaPredicted RBP20.24■□□□□ 0.83
LIMS2-216ENST00000494613 OLFM4Q6UX06 510 aa20.24■□□□□ 0.83
LIMS2-216ENST00000494613 NLRP10Q86W26 655 aa20.24■□□□□ 0.83
LIMS2-216ENST00000494613 WWC1Q8IX03 1113 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms