RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 NIP7Q9Y221 180 aaKnown RBP eCLIP28.51■■■□□ 2.15
HPS3-207ENST00000494327 KIAA1551Q9HCM1 1747 aa28.51■■■□□ 2.15
HPS3-207ENST00000494327 AFDNP55196 1824 aaKnown RBP28.5■■■□□ 2.15
HPS3-207ENST00000494327 FAM177BA6PVY3 158 aa28.49■■■□□ 2.15
HPS3-207ENST00000494327 ZNF853P0CG23 659 aa28.49■■■□□ 2.15
HPS3-207ENST00000494327 PDIA6Q15084 440 aa28.49■■■□□ 2.15
HPS3-207ENST00000494327 PROSER3Q2NL68 480 aa28.49■■■□□ 2.15
HPS3-207ENST00000494327 CNBD1Q8NA66 436 aa28.49■■■□□ 2.15
HPS3-207ENST00000494327 ZBTB3Q9H5J0 574 aa28.49■■■□□ 2.15
HPS3-207ENST00000494327 BCORQ6W2J9 1755 aa28.49■■■□□ 2.15
HPS3-207ENST00000494327 MAP3K15Q6ZN16 1313 aa28.48■■■□□ 2.15
HPS3-207ENST00000494327 NBPF5PQ86XG9 351 aaPredicted RBP28.48■■■□□ 2.15
HPS3-207ENST00000494327 C2CD5Q86YS7 1000 aa28.48■■■□□ 2.15
HPS3-207ENST00000494327 SALL2Q9Y467 1007 aaPredicted RBP28.48■■■□□ 2.15
HPS3-207ENST00000494327 NRXN2Q9P2S2 1712 aa28.47■■■□□ 2.15
HPS3-207ENST00000494327 ERVV-1B6SEH8 477 aa28.47■■■□□ 2.15
HPS3-207ENST00000494327 DALRD3Q5D0E6 543 aaKnown RBP28.47■■■□□ 2.15
HPS3-207ENST00000494327 RGL2O15211 777 aa28.46■■■□□ 2.15
HPS3-207ENST00000494327 ST5P78524 1137 aa28.46■■■□□ 2.15
HPS3-207ENST00000494327 HDGFL1Q5TGJ6 251 aa28.46■■■□□ 2.15
HPS3-207ENST00000494327 DUSP27Q5VZP5 1158 aa28.46■■■□□ 2.15
HPS3-207ENST00000494327 BRIP1Q9BX63 1249 aa28.46■■■□□ 2.15
HPS3-207ENST00000494327 GOLGB1Q14789 3259 aaKnown RBP28.45■■■□□ 2.15
HPS3-207ENST00000494327 H0YIN7 160 aa28.45■■■□□ 2.14
HPS3-207ENST00000494327 AIMP1Q12904 312 aaKnown RBP28.45■■■□□ 2.14
HPS3-207ENST00000494327 ARHGAP27Q6ZUM4 889 aa28.45■■■□□ 2.14
HPS3-207ENST00000494327 UTRNP46939 3433 aa28.44■■■□□ 2.14
HPS3-207ENST00000494327 CHD4Q14839 1912 aa28.44■■■□□ 2.14
HPS3-207ENST00000494327 ELL2O00472 640 aaPredicted RBP28.44■■■□□ 2.14
HPS3-207ENST00000494327 PDE6BP35913 854 aa28.44■■■□□ 2.14
HPS3-207ENST00000494327 CCDC27Q2M243 656 aa28.44■■■□□ 2.14
HPS3-207ENST00000494327 LRP10Q7Z4F1 713 aa28.44■■■□□ 2.14
HPS3-207ENST00000494327 WWC1Q8IX03 1113 aa28.44■■■□□ 2.14
HPS3-207ENST00000494327 HOXB7P09629 217 aa28.43■■■□□ 2.14
HPS3-207ENST00000494327 COPS6Q7L5N1 327 aa28.43■■■□□ 2.14
HPS3-207ENST00000494327 DDX21Q9NR30 783 aaKnown RBP eCLIP28.43■■■□□ 2.14
HPS3-207ENST00000494327 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
HPS3-207ENST00000494327 TPTE2Q6XPS3 522 aa28.42■■■□□ 2.14
HPS3-207ENST00000494327 ZNF784Q8NCA9 323 aaPredicted RBP28.42■■■□□ 2.14
HPS3-207ENST00000494327 XAGE3Q8WTP9 111 aa28.42■■■□□ 2.14
HPS3-207ENST00000494327 GPTP24298 496 aa28.41■■■□□ 2.14
HPS3-207ENST00000494327 GTF2E1P29083 439 aaPredicted RBP28.41■■■□□ 2.14
HPS3-207ENST00000494327 ZNF622Q969S3 477 aaKnown RBP eCLIP28.41■■■□□ 2.14
HPS3-207ENST00000494327 GIGYF2Q6Y7W6 1299 aaKnown RBP28.39■■■□□ 2.14
HPS3-207ENST00000494327 TTLL6Q8N841 843 aa28.39■■■□□ 2.14
HPS3-207ENST00000494327 TSR2Q969E8 191 aaKnown RBP28.39■■■□□ 2.14
HPS3-207ENST00000494327 C8orf58Q8NAV2 365 aa28.38■■■□□ 2.13
HPS3-207ENST00000494327 DBF4Q9UBU7 674 aaPredicted RBP28.38■■■□□ 2.13
HPS3-207ENST00000494327 PDZRN3Q9UPQ7 1066 aa28.38■■■□□ 2.13
HPS3-207ENST00000494327 BRCA1P38398 1863 aaKnown RBP28.36■■■□□ 2.13
HPS3-207ENST00000494327 NCBP3Q53F19 620 aaKnown RBP28.36■■■□□ 2.13
HPS3-207ENST00000494327 NUTM1Q86Y26 1132 aa28.35■■■□□ 2.13
HPS3-207ENST00000494327 ZNF34Q8IZ26 560 aa28.35■■■□□ 2.13
HPS3-207ENST00000494327 NYXQ9GZU5 481 aa28.35■■■□□ 2.13
HPS3-207ENST00000494327 UBN2Q6ZU65 1347 aa28.35■■■□□ 2.13
HPS3-207ENST00000494327 ATP10DQ9P241 1426 aa28.35■■■□□ 2.13
HPS3-207ENST00000494327 SUSD4Q5VX71 490 aa28.34■■■□□ 2.13
HPS3-207ENST00000494327 ANKRD31Q8N7Z5 1873 aa28.34■■■□□ 2.13
HPS3-207ENST00000494327 TSPYL6Q8N831 410 aa28.33■■■□□ 2.13
HPS3-207ENST00000494327 HYPKQ9NX55 129 aa28.33■■■□□ 2.13
HPS3-207ENST00000494327 ZNF219Q9P2Y4 722 aaPredicted RBP28.33■■■□□ 2.13
HPS3-207ENST00000494327 SRGNP10124 158 aa28.32■■■□□ 2.12
HPS3-207ENST00000494327 ERFEQ4G0M1 354 aa28.32■■■□□ 2.12
HPS3-207ENST00000494327 NUP98P52948 1817 aa28.32■■■□□ 2.12
HPS3-207ENST00000494327 MASTLQ96GX5 879 aa28.31■■■□□ 2.12
HPS3-207ENST00000494327 IL16Q14005 1332 aa28.31■■■□□ 2.12
HPS3-207ENST00000494327 HSP90AB3PQ58FF7 597 aa28.3■■■□□ 2.12
HPS3-207ENST00000494327 STYK1Q6J9G0 422 aa28.3■■■□□ 2.12
HPS3-207ENST00000494327 PPP1R42Q7Z4L9 355 aa28.3■■■□□ 2.12
HPS3-207ENST00000494327 WDR63Q8IWG1 891 aa28.3■■■□□ 2.12
HPS3-207ENST00000494327 PARP10Q53GL7 1025 aa28.29■■■□□ 2.12
HPS3-207ENST00000494327 ANKRD13DQ6ZTN6 518 aa28.29■■■□□ 2.12
HPS3-207ENST00000494327 CNKSR1Q969H4 720 aa28.29■■■□□ 2.12
HPS3-207ENST00000494327 C21orf2O43822 256 aa28.28■■■□□ 2.12
HPS3-207ENST00000494327 TCIRG1Q13488 830 aa28.28■■■□□ 2.12
HPS3-207ENST00000494327 CCDC30Q5VVM6 783 aa28.28■■■□□ 2.12
HPS3-207ENST00000494327 PLBD2Q8NHP8 589 aa28.28■■■□□ 2.12
HPS3-207ENST00000494327 ARFGEF1Q9Y6D6 1849 aa28.27■■■□□ 2.12
HPS3-207ENST00000494327 NTSR2O95665 410 aa28.27■■■□□ 2.12
HPS3-207ENST00000494327 ZNF526Q8TF50 670 aaPredicted RBP28.27■■■□□ 2.12
HPS3-207ENST00000494327 UTP14AQ9BVJ6 771 aaKnown RBP28.27■■■□□ 2.12
HPS3-207ENST00000494327 PHAXQ9H814 394 aaKnown RBP28.27■■■□□ 2.12
HPS3-207ENST00000494327 DLEC1Q9Y238 1755 aa28.27■■■□□ 2.12
HPS3-207ENST00000494327 ABCC12Q96J65 1359 aa28.26■■■□□ 2.12
HPS3-207ENST00000494327 NPR1P16066 1061 aa28.26■■■□□ 2.11
HPS3-207ENST00000494327 C9orf131Q5VYM1 1079 aa28.26■■■□□ 2.11
HPS3-207ENST00000494327 ZNF428Q96B54 188 aa28.26■■■□□ 2.11
HPS3-207ENST00000494327 CHMP4AQ9BY43 222 aa28.26■■■□□ 2.11
HPS3-207ENST00000494327 COL11A2P13942 1736 aaPredicted RBP28.26■■■□□ 2.11
HPS3-207ENST00000494327 KLRG2A4D1S0 409 aaPredicted RBP28.25■■■□□ 2.11
HPS3-207ENST00000494327 TCERG1O14776 1098 aaKnown RBP28.25■■■□□ 2.11
HPS3-207ENST00000494327 RASSF7Q02833 373 aa28.25■■■□□ 2.11
HPS3-207ENST00000494327 TWISTNBQ3B726 338 aaPredicted RBP28.25■■■□□ 2.11
HPS3-207ENST00000494327 PRPF40BQ6NWY9 871 aaKnown RBP28.25■■■□□ 2.11
HPS3-207ENST00000494327 FANCIQ9NVI1 1328 aa28.24■■■□□ 2.11
HPS3-207ENST00000494327 NLRP10Q86W26 655 aa28.24■■■□□ 2.11
HPS3-207ENST00000494327 ADCY9O60503 1353 aa28.24■■■□□ 2.11
HPS3-207ENST00000494327 IBTKQ9P2D0 1353 aaPredicted RBP28.24■■■□□ 2.11
HPS3-207ENST00000494327 GOLGA2Q08379 1002 aa28.23■■■□□ 2.11
HPS3-207ENST00000494327 RIC3Q7Z5B4 369 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms